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Mouse SNP Summary
Symbol
Name
ID 		Tssr102929
transcription start site region 102929
MGI:6030696

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Showing SNP(s) 1 - 58 of 58

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231024538
MGI SNP Detail		 Chr11:75061350 Cpgi3252 within coordinates of
Tssr102929 1947 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs249754102
MGI SNP Detail		 Chr11:75061357 Cpgi3252 within coordinates of
Tssr102929 1940 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs220459048
MGI SNP Detail		 Chr11:75061543 Cpgi3252 within coordinates of
Tssr102929 1754 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238895516
MGI SNP Detail		 Chr11:75061613 Cpgi3252 within coordinates of
Tssr102929 1684 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263653530
MGI SNP Detail		 Chr11:75061687 Cpgi3252 within coordinates of
Tssr102929 1610 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225165335
MGI SNP Detail		 Chr11:75061701 Cpgi3252 within coordinates of
Tssr102929 1596 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs245260343
MGI SNP Detail		 Chr11:75061756 Tssr102929 1541 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs266099515
MGI SNP Detail		 Chr11:75061983 Tssr102929 1314 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs228197128
MGI SNP Detail		 Chr11:75062023 Tssr102929 1274 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs28232329
MGI SNP Detail		 Chr11:75062048 Tssr102929 1249 bp upstream
 SNP A/C A A C C
rs233893601
MGI SNP Detail		 Chr11:75062052 Tssr102929 1245 bp upstream
 SNP C/T C T
rs580123891
MGI SNP Detail		 Chr11:75062118 Tssr102929 1179 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C A C C C C C C A C C C C C C C C C C C C
rs253659459
MGI SNP Detail		 Chr11:75062122 Tssr102929 1175 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A C A A A A A A C A A A A A A A A A A A
rs225907080
MGI SNP Detail		 Chr11:75062142 Tssr102929 1155 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254827863
MGI SNP Detail		 Chr11:75062153 Tssr102929 1144 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216335307
MGI SNP Detail		 Chr11:75062154 Tssr102929 1143 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232551853
MGI SNP Detail		 Chr11:75062445 Tssr102929 852 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255043994
MGI SNP Detail		 Chr11:75062448 Tssr102929 849 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs218589419
MGI SNP Detail		 Chr11:75062449 Tssr102929 848 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230944157
MGI SNP Detail		 Chr11:75062525 Tssr102929 772 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs249898242
MGI SNP Detail		 Chr11:75062626 Tssr102929 671 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs214562776
MGI SNP Detail		 Chr11:75062654 Tssr102929 643 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs232044392
MGI SNP Detail		 Chr11:75062700 Tssr102929 597 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs263390164
MGI SNP Detail		 Chr11:75062709 Tssr102929 588 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224313466
MGI SNP Detail		 Chr11:75062827 Rr451078 within coordinates of
Tssr102929 470 bp upstream
 SNP A/C A A A A A A A A A A A C A A A A A A A A C A A A C A C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29406974
MGI SNP Detail		 Chr11:75062836 1700016P03Rik within coordinates of
Rr451078 within coordinates of
Tssr102929 461 bp upstream
 SNP A/C C A C A
rs260834281
MGI SNP Detail		 Chr11:75062859 1700016P03Rik within coordinates of
Rr451078 within coordinates of
Tssr102929 438 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs221935477
MGI SNP Detail		 Chr11:75062970 1700016P03Rik within coordinates of
Cpgi3254 within coordinates of
Rr451078 within coordinates of
Tssr102929 327 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215160774
MGI SNP Detail		 Chr11:75063212 1700016P03Rik within coordinates of
Cpgi3254 within coordinates of
Rr451078 within coordinates of
Tssr102929 85 bp upstream
 SNP C/T T C
rs582360194
MGI SNP Detail		 Chr11:75063216 1700016P03Rik within coordinates of
Cpgi3254 within coordinates of
Rr451078 within coordinates of
Tssr102929 81 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253823075
MGI SNP Detail		 Chr11:75063265 1700016P03Rik within coordinates of
Cpgi3254 within coordinates of
Rr451078 within coordinates of
Tssr102929 32 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225873380
MGI SNP Detail		 Chr11:75063378 1700016P03Rik within coordinates of
Cpgi3254 within coordinates of
Rr451078 within coordinates of
Tssr102929 74 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227499710
MGI SNP Detail		 Chr11:75063474 1700016P03Rik within coordinates of
Cpgi3254 within coordinates of
Tssr102929 170 bp downstream
 SNP A/G G A
rs265660869
MGI SNP Detail		 Chr11:75063484 1700016P03Rik within coordinates of
Cpgi3254 within coordinates of
Tssr102929 180 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G A G A A
rs243811113
MGI SNP Detail		 Chr11:75063521 1700016P03Rik within coordinates of
Cpgi3254 within coordinates of
Tssr102929 217 bp downstream
 SNP A/T T A
rs214714718
MGI SNP Detail		 Chr11:75063586 1700016P03Rik within coordinates of
Cpgi3254 within coordinates of
Tssr102929 282 bp downstream
 SNP A/C A C
rs259792080
MGI SNP Detail		 Chr11:75063628 1700016P03Rik within coordinates of
Cpgi3254 within coordinates of
Tssr102929 324 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs216974916
MGI SNP Detail		 Chr11:75063884 1700016P03Rik within coordinates of
Cpgi3254 within coordinates of
Rr402719 within coordinates of
Tssr102929 580 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T C C T T T T C T C T T C T T T C C T C T T T T T T T C C T C C
rs586044786
MGI SNP Detail		 Chr11:75063921 1700016P03Rik within coordinates of
Cpgi3254 within coordinates of
Rr402719 within coordinates of
Tssr102929 617 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T T T T T T T T G T T T T T T T T T T
rs580325136
MGI SNP Detail		 Chr11:75063930 1700016P03Rik within coordinates of
Cpgi3254 within coordinates of
Rr402719 within coordinates of
Tssr102929 626 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G G G G G G G G C G G G G G G G C G G G G
rs583249059
MGI SNP Detail		 Chr11:75063949 1700016P03Rik within coordinates of
Cpgi3254 within coordinates of
Rr402719 within coordinates of
Tssr102929 645 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G
rs225376311
MGI SNP Detail		 Chr11:75064083 1700016P03Rik within coordinates of
Cpgi3254 within coordinates of
Rr402719 within coordinates of
Rr451079 within coordinates of
Tssr102929 779 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243779972
MGI SNP Detail		 Chr11:75064111 1700016P03Rik within coordinates of
Cpgi3254 within coordinates of
Rr402719 within coordinates of
Rr451079 within coordinates of
Tssr102929 807 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214697296
MGI SNP Detail		 Chr11:75064125 1700016P03Rik within coordinates of
Cpgi3254 within coordinates of
Rr451079 within coordinates of
Tssr102929 821 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G G G G G G G G C G G G G G G G G G G G
rs238272523
MGI SNP Detail		 Chr11:75064336 1700016P03Rik within coordinates of
Cpgi3254 within coordinates of
Mirc19 within coordinates of
Rr451079 within coordinates of
Tssr102929 1032 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A G G A A A A G A G A A G A A A G G A G A A A A A A A G G A G G
rs259610754
MGI SNP Detail		 Chr11:75064339 1700016P03Rik within coordinates of
Cpgi3254 within coordinates of
Mirc19 within coordinates of
Rr451079 within coordinates of
Tssr102929 1035 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs216390125
MGI SNP Detail		 Chr11:75064668 1700016P03Rik within coordinates of
Cpgi3254 within coordinates of
Rr451080 within coordinates of
Tssr102929 1364 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234342359
MGI SNP Detail		 Chr11:75064759 1700016P03Rik within coordinates of
Cpgi3254 within coordinates of
Rr451080 within coordinates of
Tssr102929 1455 bp downstream
 SNP C/G G C
rs240340042
MGI SNP Detail		 Chr11:75064828 1700016P03Rik within coordinates of
Cpgi3254 within coordinates of
Rr451080 within coordinates of
Tssr102929 1524 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs263819978
MGI SNP Detail		 Chr11:75064867 1700016P03Rik within coordinates of
Cpgi3254 within coordinates of
Rr451080 within coordinates of
Tssr102929 1563 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs221927420
MGI SNP Detail		 Chr11:75064926 1700016P03Rik within coordinates of
Rr451080 within coordinates of
Tssr102929 1622 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236702004
MGI SNP Detail		 Chr11:75064964 1700016P03Rik within coordinates of
Rr451080 within coordinates of
Tssr102929 1660 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs248048936
MGI SNP Detail		 Chr11:75064997 1700016P03Rik within coordinates of
Rr451080 within coordinates of
Tssr102929 1693 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs219931562
MGI SNP Detail		 Chr11:75065046 1700016P03Rik within coordinates of
Rr451080 within coordinates of
Tssr102929 1742 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245837950
MGI SNP Detail		 Chr11:75065126 1700016P03Rik within coordinates of
Rr451080 within coordinates of
Tssr102929 1822 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263439604
MGI SNP Detail		 Chr11:75065157 1700016P03Rik within coordinates of
Tssr102929 1853 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223912445
MGI SNP Detail		 Chr11:75065179 1700016P03Rik within coordinates of
Tssr102929 1875 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G T G G G G G G G G G G G G
rs248040803
MGI SNP Detail		 Chr11:75065257 1700016P03Rik within coordinates of
Tssr102929 1953 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 58 of 58
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory