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Mouse SNP Summary
Symbol
Name
ID 		Tssr102986
transcription start site region 102986
MGI:6030753

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Showing SNP(s) 1 - 71 of 71

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs244379911
MGI SNP Detail		 Chr11:75465884 Slc43a2 within coordinates of
Tssr102986 1832 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs585933288
MGI SNP Detail		 Chr11:75466093 Slc43a2 within coordinates of
Tssr102986 1623 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs26917428
MGI SNP Detail		 Chr11:75466106 Slc43a2 within coordinates of
Tssr102986 1610 bp upstream
 SNP C/T C C C C C C T C C C T C C C
rs583140869
MGI SNP Detail		 Chr11:75466113 Slc43a2 within coordinates of
Tssr102986 1603 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs240587036
MGI SNP Detail		 Chr11:75466125 Slc43a2 within coordinates of
Tssr102986 1591 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs258283178
MGI SNP Detail		 Chr11:75466231 Slc43a2 within coordinates of
Tssr102986 1485 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs26917427
MGI SNP Detail		 Chr11:75466255 Slc43a2 within coordinates of
Tssr102986 1461 bp upstream
 SNP A/G A A A A A A G A A A G A A G A
rs26917426
MGI SNP Detail		 Chr11:75466313 Slc43a2 within coordinates of
Tssr102986 1403 bp upstream
 SNP C/T C C C C C C C C C C C C T C C
rs235999761
MGI SNP Detail		 Chr11:75466318 Slc43a2 within coordinates of
Tssr102986 1398 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs250809818
MGI SNP Detail		 Chr11:75466358 Slc43a2 within coordinates of
Tssr102986 1358 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs26917425
MGI SNP Detail		 Chr11:75466373 Slc43a2 within coordinates of
Tssr102986 1343 bp upstream
 SNP A/G A A A A A A G A A A G A A G A
rs239962208
MGI SNP Detail		 Chr11:75466386 Slc43a2 within coordinates of
Tssr102986 1330 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs251376470
MGI SNP Detail		 Chr11:75466436 Slc43a2 within coordinates of
Tssr102986 1280 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs586613367
MGI SNP Detail		 Chr11:75466448 Slc43a2 within coordinates of
Tssr102986 1268 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs26917424
MGI SNP Detail		 Chr11:75466494 Slc43a2 within coordinates of
Tssr102986 1222 bp upstream
 SNP A/G A A G A A A A G G A G A G G A G G A G
rs247991304
MGI SNP Detail		 Chr11:75466496 Slc43a2 within coordinates of
Tssr102986 1220 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs264483387
MGI SNP Detail		 Chr11:75466504 Slc43a2 within coordinates of
Tssr102986 1212 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs234137345
MGI SNP Detail		 Chr11:75466570 Slc43a2 within coordinates of
Tssr102986 1146 bp upstream
 SNP A/C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C A C C C C
rs240843351
MGI SNP Detail		 Chr11:75466577 Slc43a2 within coordinates of
Tssr102986 1139 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs26917423
MGI SNP Detail		 Chr11:75466619 Rr451213 within coordinates of
Slc43a2 within coordinates of
Tssr102986 1097 bp upstream
 SNP C/T T T T T T T T T T T T T C T
rs26917422
MGI SNP Detail		 Chr11:75466640 Rr451213 within coordinates of
Slc43a2 within coordinates of
Tssr102986 1076 bp upstream
 SNP A/G A A A A A A A G A
rs26917421
MGI SNP Detail		 Chr11:75466642 Rr451213 within coordinates of
Slc43a2 within coordinates of
Tssr102986 1074 bp upstream
 SNP C/T T T C T T T T C C T C T C C T C C T C
rs579900802
MGI SNP Detail		 Chr11:75466644 Rr451213 within coordinates of
Slc43a2 within coordinates of
Tssr102986 1072 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs26917420
MGI SNP Detail		 Chr11:75466678 Rr402731 within coordinates of
Rr451213 within coordinates of
Slc43a2 within coordinates of
Tssr102986 1038 bp upstream
 SNP C/T C C C C C C C C C C C C C T C
rs232208463
MGI SNP Detail		 Chr11:75466684 Rr402731 within coordinates of
Rr451213 within coordinates of
Slc43a2 within coordinates of
Tssr102986 1032 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs256972751
MGI SNP Detail		 Chr11:75466689 Rr402731 within coordinates of
Rr451213 within coordinates of
Slc43a2 within coordinates of
Tssr102986 1027 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs218767923
MGI SNP Detail		 Chr11:75466823 Rr402731 within coordinates of
Rr451213 within coordinates of
Slc43a2 within coordinates of
Tssr102986 893 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235250908
MGI SNP Detail		 Chr11:75466826 Rr402731 within coordinates of
Rr451213 within coordinates of
Slc43a2 within coordinates of
Tssr102986 890 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs250846091
MGI SNP Detail		 Chr11:75466860 Rr402731 within coordinates of
Rr451213 within coordinates of
Slc43a2 within coordinates of
Tssr102986 856 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs26917419
MGI SNP Detail		 Chr11:75466878 Rr402731 within coordinates of
Rr451213 within coordinates of
Slc43a2 within coordinates of
Tssr102986 838 bp upstream
 SNP A/G G G G G G G G G G G G G G A G
rs233211840
MGI SNP Detail		 Chr11:75467004 Slc43a2 within coordinates of
Tssr102986 712 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G A G G G G
rs257387607
MGI SNP Detail		 Chr11:75467021 Slc43a2 within coordinates of
Tssr102986 695 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs26917418
MGI SNP Detail		 Chr11:75467072 Slc43a2 within coordinates of
Tssr102986 644 bp upstream
 SNP A/C A A A A A A C A A A C A A A A
rs26917417
MGI SNP Detail		 Chr11:75467119 Slc43a2 within coordinates of
Tssr102986 597 bp upstream
 SNP C/T C C C C C C T C C C C C C C
rs579954485
MGI SNP Detail		 Chr11:75467146 Slc43a2 within coordinates of
Tssr102986 570 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs26917416
MGI SNP Detail		 Chr11:75467218 Slc43a2 within coordinates of
Tssr102986 498 bp upstream
 SNP A/T A A A A A A T A A A T A
rs264308561
MGI SNP Detail		 Chr11:75467230 Slc43a2 within coordinates of
Tssr102986 486 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225838874
MGI SNP Detail		 Chr11:75467244 Slc43a2 within coordinates of
Tssr102986 472 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236740638
MGI SNP Detail		 Chr11:75467269 Slc43a2 within coordinates of
Tssr102986 447 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254602219
MGI SNP Detail		 Chr11:75467437 Slc43a2 within coordinates of
Tssr102986 279 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223456815
MGI SNP Detail		 Chr11:75467530 Slc43a2 within coordinates of
Tssr102986 186 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs26917415
MGI SNP Detail		 Chr11:75467653 Slc43a2 within coordinates of
Tssr102986 63 bp upstream
 SNP A/G G G G G G G G G G G G G G A G
rs262321359
MGI SNP Detail		 Chr11:75467658 Slc43a2 within coordinates of
Tssr102986 58 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232928644
MGI SNP Detail		 Chr11:75467756 Slc43a2 within coordinates of
Tssr102986 21 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C
rs26917414
MGI SNP Detail		 Chr11:75467798 Slc43a2 within coordinates of
Tssr102986 63 bp downstream
 SNP G/T T T T T T T G T T T G T T G T
rs26917413
MGI SNP Detail		 Chr11:75467949 Slc43a2 within coordinates of
Tssr102986 214 bp downstream
Tssr102989 within coordinates of
 SNP C/T C C C C C C C C C C C C C T C
rs587406146
MGI SNP Detail		 Chr11:75467979 Slc43a2 within coordinates of
Tssr102986 244 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs228366818
MGI SNP Detail		 Chr11:75468153 Slc43a2 within coordinates of
Tssr102986 418 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs243946733
MGI SNP Detail		 Chr11:75468302 Slc43a2 within coordinates of
Tssr102986 567 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs211729269
MGI SNP Detail		 Chr11:75468498 Tssr102986 763 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs233370756
MGI SNP Detail		 Chr11:75468508 Tssr102986 773 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs255735996
MGI SNP Detail		 Chr11:75468526 Tssr102986 791 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs26917412
MGI SNP Detail		 Chr11:75468547 Tssr102986 812 bp downstream
 SNP A/G A A A A A A G A A A G A A G A
rs240264361
MGI SNP Detail		 Chr11:75468674 Tssr102986 939 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261024300
MGI SNP Detail		 Chr11:75468675 Tssr102986 940 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs26917411
MGI SNP Detail		 Chr11:75468719 Tssr102986 984 bp downstream
 SNP C/T C C C C C C C C C C C C C T C
rs230804307
MGI SNP Detail		 Chr11:75468780 Tssr102986 1045 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A G A A A A A A A A G A G A A A A A A A G A A A A
rs248262264
MGI SNP Detail		 Chr11:75468812 Tssr102986 1077 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs220071734
MGI SNP Detail		 Chr11:75468818 Tssr102986 1083 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs244149124
MGI SNP Detail		 Chr11:75468819 Tssr102986 1084 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs265062364
MGI SNP Detail		 Chr11:75468823 Tssr102986 1088 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs26917410
MGI SNP Detail		 Chr11:75468947 Tssr102986 1212 bp downstream
 SNP A/G G G G G G G G G G G G G A G G
rs224860691
MGI SNP Detail		 Chr11:75469194 Tssr102986 1459 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs26917409
MGI SNP Detail		 Chr11:75469382 Tssr102986 1647 bp downstream
 SNP C/T C C C C C C C C C C C C C T C
rs26917408
MGI SNP Detail		 Chr11:75469445 Tssr102986 1710 bp downstream
 SNP A/G G G G G G G G G G G G G G A G
rs228440602
MGI SNP Detail		 Chr11:75469512 Tssr102986 1777 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244046413
MGI SNP Detail		 Chr11:75469522 Tssr102986 1787 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255772061
MGI SNP Detail		 Chr11:75469526 Tssr102986 1791 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226240235
MGI SNP Detail		 Chr11:75469641 Tssr102986 1906 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A G A G A A A A A A A G A A A A
rs251084386
MGI SNP Detail		 Chr11:75469661 Tssr102986 1926 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C T T T T T T C T T T T T T T C T T T T
rs217547698
MGI SNP Detail		 Chr11:75469695 Tssr102986 1960 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G A G A G G G G G G G G G G G G
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Showing SNP(s) 1 - 71 of 71
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory