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Mouse SNP Summary
Symbol
Name
ID
Tssr103209
transcription start site region 103209
MGI:6030976

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Showing SNP(s) 1 - 38 of 38

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs259670800
MGI SNP Detail
Chr11:77871583 Tssr103209 1953 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213158186
MGI SNP Detail
Chr11:77871616 Tssr103209 1920 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs582428149
MGI SNP Detail
Chr11:77871821 Tssr103209 1715 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs585694946
MGI SNP Detail
Chr11:77871865 Tssr103209 1671 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230147595
MGI SNP Detail
Chr11:77871904 Tssr103209 1632 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245941498
MGI SNP Detail
Chr11:77871906 Tssr103209 1630 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213898842
MGI SNP Detail
Chr11:77871933 Tssr103209 1603 bp upstream
SNP A/G A A A A A A A A A G A A A A A A A A A G A A G A A A A G A G A A A G A A A A G A G A A A G A A A G A G G A
rs234580545
MGI SNP Detail
Chr11:77872210 Rr386326 within coordinates of
Tssr103209 1326 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258422921
MGI SNP Detail
Chr11:77872249 Rr386326 within coordinates of
Tssr103209 1287 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs226782751
MGI SNP Detail
Chr11:77872253 Rr386326 within coordinates of
Tssr103209 1283 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs579920230
MGI SNP Detail
Chr11:77872297 Rr386326 within coordinates of
Tssr103209 1239 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239115638
MGI SNP Detail
Chr11:77872591 Gm53689 within coordinates of
Rr386326 within coordinates of
Tssr103209 945 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs261546484
MGI SNP Detail
Chr11:77872593 Gm53689 within coordinates of
Rr386326 within coordinates of
Tssr103209 943 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs217911002
MGI SNP Detail
Chr11:77872616 Gm53689 within coordinates of
Rr386326 within coordinates of
Tssr103209 920 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238333465
MGI SNP Detail
Chr11:77872639 Gm53689 within coordinates of
Rr386326 within coordinates of
Tssr103209 897 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs255283877
MGI SNP Detail
Chr11:77872809 Gm53689 within coordinates of
Rr386326 within coordinates of
Tssr103209 727 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs221355528
MGI SNP Detail
Chr11:77872817 Gm53689 within coordinates of
Rr386326 within coordinates of
Tssr103209 719 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs240251374
MGI SNP Detail
Chr11:77872861 Gm53689 within coordinates of
Rr386326 within coordinates of
Tssr103209 675 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263246050
MGI SNP Detail
Chr11:77873005 Gm53689 within coordinates of
Rr386326 within coordinates of
Tssr103209 531 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs235052691
MGI SNP Detail
Chr11:77873140 Cpgi3325 within coordinates of
Gm53689 within coordinates of
Rr386326 within coordinates of
Tssr103209 396 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253958147
MGI SNP Detail
Chr11:77873181 Cpgi3325 within coordinates of
Gm53689 within coordinates of
Rr386326 within coordinates of
Tssr103209 355 bp upstream
SNP C/T T T T T T T T T T C T T T T T T T T T C T T C T T T T C T C T T T C T T T T C T C T T T C T T T C T C C T
rs48390293
MGI SNP Detail
Chr11:77873230 Cpgi3325 within coordinates of
Gm53689 within coordinates of
Rr386326 within coordinates of
Tssr103209 306 bp upstream
SNP G/T G T
rs264962696
MGI SNP Detail
Chr11:77873271 Cpgi3325 within coordinates of
Gm53689 within coordinates of
Rr386326 within coordinates of
Tssr103209 265 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224599479
MGI SNP Detail
Chr11:77873344 Cpgi3325 within coordinates of
Gm53689 within coordinates of
Rr386326 within coordinates of
Tssr103209 192 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C T C C C C C C T C C C C C C C C C C C
rs246054147
MGI SNP Detail
Chr11:77873473 Cpgi3325 within coordinates of
Gm53689 within coordinates of
Rr386326 within coordinates of
Tssr103208 within coordinates of
Tssr103209 63 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213956952
MGI SNP Detail
Chr11:77874246 Cpgi3325 within coordinates of
Gm53689 within coordinates of
Phf12 within coordinates of
Rr386326 within coordinates of
Tssr103209 597 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T A T T T T
rs235023243
MGI SNP Detail
Chr11:77874271 Cpgi3325 within coordinates of
Gm53689 within coordinates of
Phf12 within coordinates of
Rr386326 within coordinates of
Tssr103209 622 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs256978858
MGI SNP Detail
Chr11:77874285 Cpgi3325 within coordinates of
Gm53689 within coordinates of
Phf12 within coordinates of
Rr386326 within coordinates of
Tssr103209 636 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs218832257
MGI SNP Detail
Chr11:77874304 Cpgi3325 within coordinates of
Gm53689 within coordinates of
Phf12 within coordinates of
Rr386326 within coordinates of
Tssr103209 655 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G
rs241718533
MGI SNP Detail
Chr11:77875142 Cpgi3325 within coordinates of
Phf12 within coordinates of
Tssr103209 1493 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs255984270
MGI SNP Detail
Chr11:77875188 Cpgi3325 within coordinates of
Phf12 within coordinates of
Tssr103209 1539 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C A C C C C C C A C C C C C C C C C C C
rs217662667
MGI SNP Detail
Chr11:77875275 Cpgi3325 within coordinates of
Phf12 within coordinates of
Tssr103209 1626 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A
rs232154546
MGI SNP Detail
Chr11:77875391 Cpgi3325 within coordinates of
Phf12 within coordinates of
Tssr103209 1742 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T C T T T T T T C T T T T T T T C T T T T
rs249660206
MGI SNP Detail
Chr11:77875411 Cpgi3325 within coordinates of
Phf12 within coordinates of
Tssr103209 1762 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs221362083
MGI SNP Detail
Chr11:77875487 Cpgi3325 within coordinates of
Phf12 within coordinates of
Tssr103209 1838 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs244995092
MGI SNP Detail
Chr11:77875520 Cpgi3325 within coordinates of
Phf12 within coordinates of
Tssr103209 1871 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265556601
MGI SNP Detail
Chr11:77875523 Cpgi3325 within coordinates of
Phf12 within coordinates of
Tssr103209 1874 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs226872457
MGI SNP Detail
Chr11:77875625 Cpgi3325 within coordinates of
Phf12 within coordinates of
Tssr103209 1976 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
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Showing SNP(s) 1 - 38 of 38

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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory