About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Tssr103643
transcription start site region 103643
MGI:6031410

<< first < prev1 next > last >>
Showing SNP(s) 1 - 36 of 36

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
SNP Density Heatmap
Chr11 from 82,958,104 bp to 82,962,122 bp
(4,019 bp)
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs249086106
MGI SNP Detail		 Chr11:82958515 Gm20234 within coordinates of
Slfn2 within coordinates of
Tssr103643 1589 bp upstream
 SNP A/T T T T T A T T T T T T T T T T T T T T T T T T A A T T T T T T T T T T T A T A T T T T A T T T T A A T T A
rs50210671
MGI SNP Detail		 Chr11:82958906 D11Pas76 within coordinates of
Slfn2 within coordinates of
Tssr103643 1198 bp upstream
 SNP A A A
rs28191180
MGI SNP Detail		 Chr11:82958984 D11Pas76 within coordinates of
Slfn2 within coordinates of
Tssr103643 1120 bp upstream
 SNP C/T C C C T C C T T T T T T T
rs49644157
MGI SNP Detail		 Chr11:82959203 Slfn2 within coordinates of
Tssr103643 901 bp upstream
 SNP A A A
rs47168729
MGI SNP Detail		 Chr11:82959229 Slfn2 within coordinates of
Tssr103642 within coordinates of
Tssr103643 875 bp upstream
 SNP A A
rs232955377
MGI SNP Detail		 Chr11:82959398 Slfn2 within coordinates of
Tssr103643 706 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs28191179
MGI SNP Detail		 Chr11:82959550 Slfn2 within coordinates of
Tssr103643 554 bp upstream
 SNP A/G G G G A G G G A G G G G A G G
rs216864658
MGI SNP Detail		 Chr11:82959851 Slfn2 within coordinates of
Tssr103643 253 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A G
rs235323035
MGI SNP Detail		 Chr11:82959898 Slfn2 within coordinates of
Tssr103643 206 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs29455117
MGI SNP Detail		 Chr11:82960011 Slfn2 within coordinates of
Tssr103643 93 bp upstream
 SNP C/T C C T
rs258341153
MGI SNP Detail		 Chr11:82960082 Slfn2 within coordinates of
Tssr103643 22 bp upstream
 SNP A/T A T
rs237261711
MGI SNP Detail		 Chr11:82960095 Slfn2 within coordinates of
Tssr103643 9 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs28191178
MGI SNP Detail		 Chr11:82960223 Slfn2 within coordinates of
Tssr103643 101 bp downstream
 SNP A/G A A A G A A A A G A A A G G A
rs223114335
MGI SNP Detail		 Chr11:82960289 Slfn2 within coordinates of
Tssr103643 167 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C
rs240225239
MGI SNP Detail		 Chr11:82960335 Slfn2 within coordinates of
Tssr103643 213 bp downstream
Tssr103645 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259575773
MGI SNP Detail		 Chr11:82960592 Slfn2 within coordinates of
Tssr103643 470 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs28191177
MGI SNP Detail		 Chr11:82960641 Slfn2 within coordinates of
Tssr103643 519 bp downstream
 SNP A/C A A A C C A A C C C C C C C C C
rs242528389
MGI SNP Detail		 Chr11:82960674 Slfn2 within coordinates of
Tssr103643 552 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs28191176
MGI SNP Detail		 Chr11:82960745 Slfn2 within coordinates of
Tssr103643 623 bp downstream
 SNP A/G A A A G G A A G G G G G G G G
rs229093111
MGI SNP Detail		 Chr11:82961186 Slfn2 within coordinates of
Tssr103643 1064 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C
rs255594992
MGI SNP Detail		 Chr11:82961187 Slfn2 within coordinates of
Tssr103643 1065 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G T
rs45983804
MGI SNP Detail		 Chr11:82961248 Slfn2 within coordinates of
Tssr103643 1126 bp downstream
 SNP T T
rs227160716
MGI SNP Detail		 Chr11:82961255 Slfn2 within coordinates of
Tssr103643 1133 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C A C C C A C C C C C C C C
rs51724010
MGI SNP Detail		 Chr11:82961256 Slfn2 within coordinates of
Tssr103643 1134 bp downstream
 SNP C/T C T
rs216714238
MGI SNP Detail		 Chr11:82961330 Slfn2 within coordinates of
Tssr103643 1208 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G A G G G A G G G A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs235353176
MGI SNP Detail		 Chr11:82961338 Slfn2 within coordinates of
Tssr103643 1216 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G A G A G G G G G G A G G G G G G G G G G G G G G G
rs49757282
MGI SNP Detail		 Chr11:82961361 Slfn2 within coordinates of
Tssr103643 1239 bp downstream
 SNP C/T T C
rs47863292
MGI SNP Detail		 Chr11:82961364 Slfn2 within coordinates of
Tssr103643 1242 bp downstream
 SNP G/T T G
rs49791235
MGI SNP Detail		 Chr11:82961415 Slfn2 within coordinates of
Tssr103643 1293 bp downstream
 SNP C/T C C C T
rs49299813
MGI SNP Detail		 Chr11:82961522 Tssr103643 1400 bp downstream
 SNP C/T C T
rs223422869
MGI SNP Detail		 Chr11:82961593 Tssr103643 1471 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs233842667
MGI SNP Detail		 Chr11:82961773 Tssr103643 1651 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C T
rs253330193
MGI SNP Detail		 Chr11:82961863 Tssr103643 1741 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs29421425
MGI SNP Detail		 Chr11:82961883 Tssr103643 1761 bp downstream
 SNP A/G G G A A
rs585186687
MGI SNP Detail		 Chr11:82961900 Tssr103643 1778 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A
rs587344160
MGI SNP Detail		 Chr11:82962058 Tssr103643 1936 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
<< first < prev1 next > last >>
Showing SNP(s) 1 - 36 of 36
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory