About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Tssr104494
transcription start site region 104494
MGI:6032261

<< first < prev1 next > last >>
Showing SNP(s) 1 - 29 of 29

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29459396
MGI SNP Detail		 Chr11:96192492 Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 1984 bp upstream
 SNP C/T T T C T T
rs27045541
MGI SNP Detail		 Chr11:96192527 Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 1949 bp upstream
 SNP C/G G G G G G G G G G C G G G G
rs27045540
MGI SNP Detail		 Chr11:96192650 Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 1826 bp upstream
 SNP A/G A A G G A A A A A A G A A G
rs223383314
MGI SNP Detail		 Chr11:96192651 Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 1825 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs249844138
MGI SNP Detail		 Chr11:96192781 Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 1695 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs27045539
MGI SNP Detail		 Chr11:96193310 Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 1166 bp upstream
 SNP C/T C C C C C C C T
rs27045538
MGI SNP Detail		 Chr11:96193483 Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 993 bp upstream
 SNP G/T T T G G T T T G T T T G T T G
rs243683159
MGI SNP Detail		 Chr11:96193567 Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 909 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs264987539
MGI SNP Detail		 Chr11:96193591 Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 885 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225667467
MGI SNP Detail		 Chr11:96193610 Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 866 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29480656
MGI SNP Detail		 Chr11:96193637 Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 839 bp upstream
 SNP C/T C C T C C
rs254127962
MGI SNP Detail		 Chr11:96193646 Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 830 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs229504481
MGI SNP Detail		 Chr11:96193705 Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 771 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs583709681
MGI SNP Detail		 Chr11:96193825 Hoxb5os within coordinates of
Rr238046 within coordinates of
Rr247589 within coordinates of
Tssr104494 651 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs259353631
MGI SNP Detail		 Chr11:96194011 Cpgi3643 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 465 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263669376
MGI SNP Detail		 Chr11:96194448 Cpgi3643 within coordinates of
Hoxb5 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104493 within coordinates of
Tssr104494 28 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs232361548
MGI SNP Detail		 Chr11:96194685 Cpgi3643 within coordinates of
Hoxb5 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 141 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251557859
MGI SNP Detail		 Chr11:96194907 Cpgi3643 within coordinates of
Hoxb5 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 363 bp downstream
Tssr104499 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27045537
MGI SNP Detail		 Chr11:96194937 Cpgi3643 within coordinates of
Hoxb5 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 393 bp downstream
 SNP A/G G A A G G G G A A
rs230552318
MGI SNP Detail		 Chr11:96195029 Cpgi3643 within coordinates of
Hoxb5 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 485 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243533775
MGI SNP Detail		 Chr11:96195097 Hoxb5 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 553 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs239411455
MGI SNP Detail		 Chr11:96195162 Hoxb5 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 618 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs263276351
MGI SNP Detail		 Chr11:96195544 Hoxb5 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 1000 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs223952351
MGI SNP Detail		 Chr11:96195573 Hoxb5 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 1029 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238838921
MGI SNP Detail		 Chr11:96195692 Cpgi3644 within coordinates of
Hoxb5 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 1148 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29436421
MGI SNP Detail		 Chr11:96196178 Hoxb5 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 1634 bp downstream
 SNP A/T T T A T T
rs218402857
MGI SNP Detail		 Chr11:96196338 Hoxb5 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 1794 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs29480669
MGI SNP Detail		 Chr11:96196415 Hoxb5 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 1871 bp downstream
 SNP C/T C C T C C
rs254271674
MGI SNP Detail		 Chr11:96196516 Hoxb5 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 1972 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
<< first < prev1 next > last >>
Showing SNP(s) 1 - 29 of 29
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory