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Mouse SNP Summary
Symbol
Name
ID
Tssr104494
transcription start site region 104494
MGI:6032261

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Showing SNP(s) 1 - 29 of 29

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29459396
MGI SNP Detail
Chr11:96192492 Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 1984 bp upstream
SNP C/T T T C T T
rs27045541
MGI SNP Detail
Chr11:96192527 Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 1949 bp upstream
SNP C/G G G G G G G G G G C G G G G
rs27045540
MGI SNP Detail
Chr11:96192650 Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 1826 bp upstream
SNP A/G A A G G A A A A A A G A A G
rs223383314
MGI SNP Detail
Chr11:96192651 Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 1825 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs249844138
MGI SNP Detail
Chr11:96192781 Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 1695 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs27045539
MGI SNP Detail
Chr11:96193310 Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 1166 bp upstream
SNP C/T C C C C C C C T
rs27045538
MGI SNP Detail
Chr11:96193483 Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 993 bp upstream
SNP G/T T T G G T T T G T T T G T T G
rs243683159
MGI SNP Detail
Chr11:96193567 Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 909 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs264987539
MGI SNP Detail
Chr11:96193591 Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 885 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225667467
MGI SNP Detail
Chr11:96193610 Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 866 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29480656
MGI SNP Detail
Chr11:96193637 Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 839 bp upstream
SNP C/T C C T C C
rs254127962
MGI SNP Detail
Chr11:96193646 Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 830 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs229504481
MGI SNP Detail
Chr11:96193705 Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 771 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs583709681
MGI SNP Detail
Chr11:96193825 Hoxb5os within coordinates of
Rr238046 within coordinates of
Rr247589 within coordinates of
Tssr104494 651 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs259353631
MGI SNP Detail
Chr11:96194011 Cpgi3643 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 465 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263669376
MGI SNP Detail
Chr11:96194448 Cpgi3643 within coordinates of
Hoxb5 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104493 within coordinates of
Tssr104494 28 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs232361548
MGI SNP Detail
Chr11:96194685 Cpgi3643 within coordinates of
Hoxb5 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 141 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251557859
MGI SNP Detail
Chr11:96194907 Cpgi3643 within coordinates of
Hoxb5 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 363 bp downstream
Tssr104499 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27045537
MGI SNP Detail
Chr11:96194937 Cpgi3643 within coordinates of
Hoxb5 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 393 bp downstream
SNP A/G G A A G G G G A A
rs230552318
MGI SNP Detail
Chr11:96195029 Cpgi3643 within coordinates of
Hoxb5 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 485 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243533775
MGI SNP Detail
Chr11:96195097 Hoxb5 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 553 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs239411455
MGI SNP Detail
Chr11:96195162 Hoxb5 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 618 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs263276351
MGI SNP Detail
Chr11:96195544 Hoxb5 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 1000 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs223952351
MGI SNP Detail
Chr11:96195573 Hoxb5 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 1029 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238838921
MGI SNP Detail
Chr11:96195692 Cpgi3644 within coordinates of
Hoxb5 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 1148 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29436421
MGI SNP Detail
Chr11:96196178 Hoxb5 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 1634 bp downstream
SNP A/T T T A T T
rs218402857
MGI SNP Detail
Chr11:96196338 Hoxb5 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 1794 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs29480669
MGI SNP Detail
Chr11:96196415 Hoxb5 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 1871 bp downstream
SNP C/T C C T C C
rs254271674
MGI SNP Detail
Chr11:96196516 Hoxb5 within coordinates of
Hoxb5os within coordinates of
Rr247589 within coordinates of
Tssr104494 1972 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 29 of 29

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory