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Mouse SNP Summary
Symbol
Name
ID
Tssr105316
transcription start site region 105316
MGI:6033083

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs266109520
MGI SNP Detail
Chr11:103059261 Gm51919 within coordinates of
Tssr105316 1981 bp upstream
SNP A/G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226712945
MGI SNP Detail
Chr11:103059280 Gm51919 within coordinates of
Tssr105316 1962 bp upstream
SNP A/C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs245454041
MGI SNP Detail
Chr11:103059302 Gm51919 within coordinates of
Tssr105316 1940 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs216091042
MGI SNP Detail
Chr11:103059328 Gm51919 within coordinates of
Tssr105316 1914 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs231517109
MGI SNP Detail
Chr11:103059329 Gm51919 within coordinates of
Tssr105316 1913 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256375653
MGI SNP Detail
Chr11:103059334 Gm51919 within coordinates of
Tssr105316 1908 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs212070461
MGI SNP Detail
Chr11:103059371 Gm51919 within coordinates of
Tssr105316 1871 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237549458
MGI SNP Detail
Chr11:103059375 Gm51919 within coordinates of
Tssr105316 1867 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260530594
MGI SNP Detail
Chr11:103059474 Gm51919 within coordinates of
Tssr105316 1768 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217717305
MGI SNP Detail
Chr11:103059517 Gm51919 within coordinates of
Tssr105316 1725 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234238783
MGI SNP Detail
Chr11:103059569 Gm51919 within coordinates of
Tssr105316 1673 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A G A A A A G A G A A A A A A A A A A A A
rs253445216
MGI SNP Detail
Chr11:103059633 Gm51919 within coordinates of
Rr403012 within coordinates of
Tssr105316 1609 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C T T T T C T C T T T T T T T C T T T T
rs219379852
MGI SNP Detail
Chr11:103059698 Gm51919 within coordinates of
Rr403012 within coordinates of
Tssr105316 1544 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs243798443
MGI SNP Detail
Chr11:103059779 Gm51919 within coordinates of
Rr403012 within coordinates of
Tssr105316 1463 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs260641713
MGI SNP Detail
Chr11:103059829 Gm51919 within coordinates of
Rr403012 within coordinates of
Tssr105316 1413 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221013155
MGI SNP Detail
Chr11:103059909 Gm51919 within coordinates of
Rr403012 within coordinates of
Tssr105316 1333 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C T T T T C T C T T T T T T T T T C T
rs250180579
MGI SNP Detail
Chr11:103059935 Gm51919 within coordinates of
Tssr105316 1307 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs259821420
MGI SNP Detail
Chr11:103059963 Gm51919 within coordinates of
Tssr105316 1279 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A G A G A A A A A A A G A A A A
rs226776278
MGI SNP Detail
Chr11:103060049 Gm51919 within coordinates of
Tssr105316 1193 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs239890835
MGI SNP Detail
Chr11:103060139 Gm51919 within coordinates of
Tssr105316 1103 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs255195290
MGI SNP Detail
Chr11:103060187 Gm51919 within coordinates of
Tssr105316 1055 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs230425673
MGI SNP Detail
Chr11:103060212 Gm51919 within coordinates of
Tssr105316 1030 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs251658273
MGI SNP Detail
Chr11:103060220 Gm51919 within coordinates of
Tssr105316 1022 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212346859
MGI SNP Detail
Chr11:103060327 Gm51919 within coordinates of
Tssr105316 915 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T G T G T T T T T T T G T T T T
rs228842865
MGI SNP Detail
Chr11:103060333 Gm51919 within coordinates of
Tssr105316 909 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs259692104
MGI SNP Detail
Chr11:103060371 Gm51919 within coordinates of
Tssr105316 871 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs217776109
MGI SNP Detail
Chr11:103060372 Gm51919 within coordinates of
Tssr105316 870 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs234299271
MGI SNP Detail
Chr11:103060442 Gm51919 within coordinates of
Tssr105316 800 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs253864947
MGI SNP Detail
Chr11:103060455 Gm51919 within coordinates of
Tssr105316 787 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A G A G A A A A A A A G A A A A
rs213889761
MGI SNP Detail
Chr11:103060541 Gm51919 within coordinates of
Tssr105316 701 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A G A A G A A A A G A G A A A A A A A G A A G A
rs238841911
MGI SNP Detail
Chr11:103060669 Gm51919 within coordinates of
Tssr105316 573 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C T C T C C C C C C C C C C C C
rs255268220
MGI SNP Detail
Chr11:103060696 Gm51919 within coordinates of
Tssr105316 546 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A C A C A A A A A A A A A A A A
rs220711313
MGI SNP Detail
Chr11:103060742 Gm51919 within coordinates of
Tssr105316 500 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs246984898
MGI SNP Detail
Chr11:103060799 Gm51919 within coordinates of
Tssr105316 443 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253201762
MGI SNP Detail
Chr11:103060805 Gm51919 within coordinates of
Tssr105316 437 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220736064
MGI SNP Detail
Chr11:103060841 Gm51919 within coordinates of
Tssr105316 401 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C T C T C C C C C C C C C C C C
rs587342207
MGI SNP Detail
Chr11:103060878 Gm51919 within coordinates of
Tssr105316 364 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239950606
MGI SNP Detail
Chr11:103060922 Gm51919 within coordinates of
Tssr105316 320 bp upstream
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs255271908
MGI SNP Detail
Chr11:103060926 Gm51919 within coordinates of
Tssr105316 316 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A C A C A A A A A A A C A A A A
rs230748413
MGI SNP Detail
Chr11:103060938 Gm51919 within coordinates of
Tssr105316 304 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247114795
MGI SNP Detail
Chr11:103060956 Gm51919 within coordinates of
Tssr105316 286 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A G A G A A A A A A A G A A A A
rs261613245
MGI SNP Detail
Chr11:103060977 Gm51919 within coordinates of
Tssr105316 265 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs229383024
MGI SNP Detail
Chr11:103060994 Gm51919 within coordinates of
Tssr105316 248 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A G A G A A A A A A A G A A A A
rs248079979
MGI SNP Detail
Chr11:103061148 Gm51919 within coordinates of
Tssr105316 94 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs217445952
MGI SNP Detail
Chr11:103061169 Gm51919 within coordinates of
Tssr105316 73 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs227752700
MGI SNP Detail
Chr11:103061173 Gm51919 within coordinates of
Tssr105316 69 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs247581485
MGI SNP Detail
Chr11:103061255 Gm51919 within coordinates of
Tssr105316 2 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs257356055
MGI SNP Detail
Chr11:103061500 Cpgi3957 within coordinates of
Tssr105316 247 bp downstream
SNP C/T T C
rs237256733
MGI SNP Detail
Chr11:103061534 Cpgi3957 within coordinates of
Tssr105316 281 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A G G G G A G A G G G G G G G A G G G G
rs252274928
MGI SNP Detail
Chr11:103061859 Cpgi3957 within coordinates of
Tssr105316 606 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212594420
MGI SNP Detail
Chr11:103061925 Cpgi3957 within coordinates of
Tssr105316 672 bp downstream
Tssr105323 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs241773529
MGI SNP Detail
Chr11:103062078 Cpgi3957 within coordinates of
Fmnl1 within coordinates of
Tssr105316 825 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252949636
MGI SNP Detail
Chr11:103062097 Cpgi3957 within coordinates of
Fmnl1 within coordinates of
Tssr105316 844 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs220431830
MGI SNP Detail
Chr11:103062322 Cpgi3957 within coordinates of
Fmnl1 within coordinates of
Tssr105316 1069 bp downstream
SNP A/G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G
rs233565056
MGI SNP Detail
Chr11:103062328 Cpgi3957 within coordinates of
Fmnl1 within coordinates of
Tssr105316 1075 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249650625
MGI SNP Detail
Chr11:103062379 Cpgi3957 within coordinates of
Fmnl1 within coordinates of
Tssr105316 1126 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223027421
MGI SNP Detail
Chr11:103062385 Cpgi3957 within coordinates of
Fmnl1 within coordinates of
Tssr105316 1132 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241007728
MGI SNP Detail
Chr11:103062453 Cpgi3957 within coordinates of
Fmnl1 within coordinates of
Tssr105316 1200 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs582021451
MGI SNP Detail
Chr11:103062493 Cpgi3957 within coordinates of
Fmnl1 within coordinates of
Tssr105316 1240 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs584323639
MGI SNP Detail
Chr11:103062494 Cpgi3957 within coordinates of
Fmnl1 within coordinates of
Tssr105316 1241 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264708349
MGI SNP Detail
Chr11:103062628 Fmnl1 within coordinates of
Tssr105316 1375 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G A G A G G G G G G G G G G G G
rs221829957
MGI SNP Detail
Chr11:103062720 Fmnl1 within coordinates of
Tssr105316 1467 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs242142504
MGI SNP Detail
Chr11:103062747 Fmnl1 within coordinates of
Tssr105316 1494 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs261339392
MGI SNP Detail
Chr11:103062768 Fmnl1 within coordinates of
Tssr105316 1515 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227394499
MGI SNP Detail
Chr11:103062782 Fmnl1 within coordinates of
Tssr105316 1529 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs247639759
MGI SNP Detail
Chr11:103062906 Fmnl1 within coordinates of
Tssr105316 1653 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262562941
MGI SNP Detail
Chr11:103063113 Fmnl1 within coordinates of
Tssr105316 1860 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231550001
MGI SNP Detail
Chr11:103063144 Fmnl1 within coordinates of
Tssr105316 1891 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T C T C T T T T T T T C T T T T
rs249376983
MGI SNP Detail
Chr11:103063188 Fmnl1 within coordinates of
Tssr105316 1935 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C T C T C C C C C C C C C C C C
rs213528875
MGI SNP Detail
Chr11:103063190 Fmnl1 within coordinates of
Tssr105316 1937 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs234101330
MGI SNP Detail
Chr11:103063252 Fmnl1 within coordinates of
Tssr105316 1999 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G A G A G G G G G G G A G G G G
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Showing SNP(s) 1 - 71 of 71

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory