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Mouse SNP Summary
Symbol
Name
ID 		Tssr106000
transcription start site region 106000
MGI:6033767

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Showing SNP(s) 1 - 46 of 46

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs235253327
MGI SNP Detail		 Chr11:116741449 Rr246191 within coordinates of
Srsf2 within coordinates of
Tssr106000 1561 bp upstream
Tssr111999 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261960210
MGI SNP Detail		 Chr11:116741457 Rr246191 within coordinates of
Srsf2 within coordinates of
Tssr106000 1553 bp upstream
Tssr111999 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs223215931
MGI SNP Detail		 Chr11:116741836 Rr246191 within coordinates of
Srsf2 within coordinates of
Tssr106000 1174 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247779936
MGI SNP Detail		 Chr11:116742005 Rr246191 within coordinates of
Srsf2 within coordinates of
Tssr106000 1005 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs581079653
MGI SNP Detail		 Chr11:116742067 Rr246191 within coordinates of
Srsf2 within coordinates of
Tssr106000 943 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs29427384
MGI SNP Detail		 Chr11:116742068 Rr246191 within coordinates of
Srsf2 within coordinates of
Tssr106000 942 bp upstream
 SNP A/G G G G A G G A
rs222640086
MGI SNP Detail		 Chr11:116742147 Rr246191 within coordinates of
Srsf2 within coordinates of
Tssr106000 863 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs242106047
MGI SNP Detail		 Chr11:116742187 Rr246191 within coordinates of
Srsf2 within coordinates of
Tssr106000 823 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs261316866
MGI SNP Detail		 Chr11:116742193 Rr246191 within coordinates of
Srsf2 within coordinates of
Tssr106000 817 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228505068
MGI SNP Detail		 Chr11:116742303 Rr246191 within coordinates of
Srsf2 within coordinates of
Tssr106000 707 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242358165
MGI SNP Detail		 Chr11:116742558 Rr246191 within coordinates of
Srsf2 within coordinates of
Tssr106000 452 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs265148360
MGI SNP Detail		 Chr11:116742561 Rr246191 within coordinates of
Srsf2 within coordinates of
Tssr106000 449 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs29440951
MGI SNP Detail		 Chr11:116742995 Cpgi4197 within coordinates of
Rr246191 within coordinates of
Srsf2 within coordinates of
Tssr106000 15 bp upstream
Tssr112006 within coordinates of
 SNP C/G C C G C C G
rs29469002
MGI SNP Detail		 Chr11:116743118 Cpgi4197 within coordinates of
Rr246191 within coordinates of
Srsf2 within coordinates of
Tssr106000 72 bp downstream
 SNP A/G G G A G G A
rs262027737
MGI SNP Detail		 Chr11:116743172 Cpgi4197 within coordinates of
Rr246191 within coordinates of
Srsf2 within coordinates of
Tssr106000 126 bp downstream
Tssr112008 within coordinates of
 SNP C C C
rs228832903
MGI SNP Detail		 Chr11:116743284 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Srsf2 within coordinates of
Tssr106000 238 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G T G G G G G G G G G G
rs247164614
MGI SNP Detail		 Chr11:116743329 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Srsf2 within coordinates of
Tssr106000 283 bp downstream
Tssr106001 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G G G G G G C G G G G G G C G G G
rs211725026
MGI SNP Detail		 Chr11:116743360 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Srsf2 within coordinates of
Tssr106000 314 bp downstream
Tssr106001 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs49871352
MGI SNP Detail		 Chr11:116743501 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Srsf2 within coordinates of
Tssr106000 455 bp downstream
 SNP T T
rs256833839
MGI SNP Detail		 Chr11:116743528 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Srsf2 within coordinates of
Tssr106000 482 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A G G G G G G A G G G G G G G G G G G
rs47737022
MGI SNP Detail		 Chr11:116743648 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Srsf2 within coordinates of
Tssr106000 602 bp downstream
 SNP C/T C C T
rs13461848
MGI SNP Detail		 Chr11:116743772 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Srsf2 within coordinates of
Tssr106000 726 bp downstream
 SNP C/G G C
rs50462737
MGI SNP Detail		 Chr11:116743816 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Srsf2 within coordinates of
Tssr106000 770 bp downstream
 SNP A/G G A
rs48105609
MGI SNP Detail		 Chr11:116743829 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Rr403146 within coordinates of
Srsf2 within coordinates of
Tssr106000 783 bp downstream
 SNP A/G A G
rs236334738
MGI SNP Detail		 Chr11:116743835 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Rr403146 within coordinates of
Srsf2 within coordinates of
Tssr106000 789 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs45796006
MGI SNP Detail		 Chr11:116743855 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Rr403146 within coordinates of
Srsf2 within coordinates of
Tssr106000 809 bp downstream
 SNP A/C C C C C A A A C C C C A A A A A A C C C C C C C A C C C C C C C C C C C C C C C C C A C C C A C C
rs50566875
MGI SNP Detail		 Chr11:116743871 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Rr403146 within coordinates of
Srsf2 within coordinates of
Tssr106000 825 bp downstream
 SNP C/G C G
rs245243600
MGI SNP Detail		 Chr11:116743884 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Rr403146 within coordinates of
Srsf2 within coordinates of
Tssr106000 838 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs262435812
MGI SNP Detail		 Chr11:116743917 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Rr403146 within coordinates of
Srsf2 within coordinates of
Tssr106000 871 bp downstream
Tssr112010 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A
rs223345420
MGI SNP Detail		 Chr11:116743958 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Rr403146 within coordinates of
Tssr106000 912 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29462793
MGI SNP Detail		 Chr11:116743988 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Rr403146 within coordinates of
Tssr106000 942 bp downstream
 SNP A/G G A A G
rs258381404
MGI SNP Detail		 Chr11:116744056 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Rr403146 within coordinates of
Tssr106000 1010 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T C T T T T T T C T T T T T T C T T T T
rs228869535
MGI SNP Detail		 Chr11:116744079 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Rr403146 within coordinates of
Tssr106000 1033 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247770645
MGI SNP Detail		 Chr11:116744083 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Rr403146 within coordinates of
Tssr106000 1037 bp downstream
Tssr106002 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs264498376
MGI SNP Detail		 Chr11:116744172 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Tssr106000 1126 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C T C C C C C C T C C C C C C C C C C C
rs240174235
MGI SNP Detail		 Chr11:116744192 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Tssr106000 1146 bp downstream
 SNP G/T G T
rs579247542
MGI SNP Detail		 Chr11:116744231 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Tssr106000 1185 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs581585065
MGI SNP Detail		 Chr11:116744238 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Tssr106000 1192 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254835109
MGI SNP Detail		 Chr11:116744361 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Tssr106000 1315 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214548260
MGI SNP Detail		 Chr11:116744367 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Tssr106000 1321 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs233585708
MGI SNP Detail		 Chr11:116744548 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Rr403147 within coordinates of
Tssr106000 1502 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247165080
MGI SNP Detail		 Chr11:116744566 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Rr403147 within coordinates of
Tssr106000 1520 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216543282
MGI SNP Detail		 Chr11:116744666 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Rr403147 within coordinates of
Tssr106000 1620 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29418032
MGI SNP Detail		 Chr11:116744702 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Tssr106000 1656 bp downstream
 SNP A/G A A G A A G
rs255435399
MGI SNP Detail		 Chr11:116744709 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Tssr106000 1663 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs220212824
MGI SNP Detail		 Chr11:116744740 Cpgi4197 within coordinates of
Mfsd11 within coordinates of
Rr246191 within coordinates of
Tssr106000 1694 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
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Showing SNP(s) 1 - 46 of 46
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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