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Mouse SNP Summary
Symbol
Name
ID 		Tssr106341
transcription start site region 106341
MGI:6034108

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Showing SNP(s) 1 - 42 of 42

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs584125767
MGI SNP Detail		 Chr11:120596961 Aspscr1 within coordinates of
Gm17178 within coordinates of
Tssr106341 1966 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs213356730
MGI SNP Detail		 Chr11:120597158 Aspscr1 within coordinates of
Gm17178 within coordinates of
Tssr106341 1769 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228935028
MGI SNP Detail		 Chr11:120597159 Aspscr1 within coordinates of
Gm17178 within coordinates of
Tssr106341 1768 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A G G G G G G A A A G G G A G G G G G
rs46236328
MGI SNP Detail		 Chr11:120597397 Aspscr1 within coordinates of
Gm17178 within coordinates of
Tssr106341 1530 bp upstream
 SNP C/T T C
rs579294369
MGI SNP Detail		 Chr11:120597521 Aspscr1 within coordinates of
Gm17178 within coordinates of
Tssr106341 1406 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs582752320
MGI SNP Detail		 Chr11:120597566 Aspscr1 within coordinates of
Gm17178 within coordinates of
Tssr106341 1361 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs218858576
MGI SNP Detail		 Chr11:120597577 Aspscr1 within coordinates of
Gm17178 within coordinates of
Tssr106341 1350 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs586336699
MGI SNP Detail		 Chr11:120597709 Aspscr1 within coordinates of
Gm17178 within coordinates of
Rr246347 within coordinates of
Tssr106341 1218 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs239358167
MGI SNP Detail		 Chr11:120597806 Aspscr1 within coordinates of
Gm17178 within coordinates of
Rr246347 within coordinates of
Tssr106341 1121 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251886452
MGI SNP Detail		 Chr11:120597807 Aspscr1 within coordinates of
Gm17178 within coordinates of
Rr246347 within coordinates of
Tssr106341 1120 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs580140083
MGI SNP Detail		 Chr11:120598448 Aspscr1 within coordinates of
Gm17178 within coordinates of
Rr246347 within coordinates of
Tssr106341 479 bp upstream
 SNP C/T C C C C C C C C C C C T C C T C C C C C C C C C C C C C C C
rs582602178
MGI SNP Detail		 Chr11:120598472 Aspscr1 within coordinates of
Gm17178 within coordinates of
Rr246347 within coordinates of
Tssr106341 455 bp upstream
 SNP C/T T T T T T T T T T T C T T T T C T C T
rs215121030
MGI SNP Detail		 Chr11:120598524 Aspscr1 within coordinates of
Gm17178 within coordinates of
Rr246347 within coordinates of
Tssr106341 403 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C
rs232124006
MGI SNP Detail		 Chr11:120598543 Aspscr1 within coordinates of
Gm17178 within coordinates of
Rr246347 within coordinates of
Tssr106341 384 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249737218
MGI SNP Detail		 Chr11:120598554 Aspscr1 within coordinates of
Gm17178 within coordinates of
Rr246347 within coordinates of
Tssr106341 373 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218709320
MGI SNP Detail		 Chr11:120598691 Aspscr1 within coordinates of
Gm17178 within coordinates of
Rr246347 within coordinates of
Tssr106341 236 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244156566
MGI SNP Detail		 Chr11:120598727 Aspscr1 within coordinates of
Gm17178 within coordinates of
Rr246347 within coordinates of
Tssr106341 200 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A A A C C C A A C C C C
rs261013887
MGI SNP Detail		 Chr11:120598738 Aspscr1 within coordinates of
Gm17178 within coordinates of
Rr246347 within coordinates of
Tssr106341 189 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A A A G G G A G A G G G G
rs226454438
MGI SNP Detail		 Chr11:120598748 Aspscr1 within coordinates of
Gm17178 within coordinates of
Rr246347 within coordinates of
Tssr106341 179 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A T A A A A A A A A A A A
rs246684112
MGI SNP Detail		 Chr11:120598756 Aspscr1 within coordinates of
Gm17178 within coordinates of
Rr246347 within coordinates of
Tssr106341 171 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs259402154
MGI SNP Detail		 Chr11:120598858 Aspscr1 within coordinates of
Gm17178 within coordinates of
Tssr106341 69 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T T T G G G T G T G G G G
rs226912465
MGI SNP Detail		 Chr11:120598924 Aspscr1 within coordinates of
Gm17178 within coordinates of
Tssr106341 3 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G G G C C C G C G C C C C
rs239305178
MGI SNP Detail		 Chr11:120598930 Aspscr1 within coordinates of
Gm17178 within coordinates of
Tssr106341 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs257161219
MGI SNP Detail		 Chr11:120599081 Aspscr1 within coordinates of
Gm17178 within coordinates of
Tssr106341 138 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C C C T T T C T C T T T T
rs228283420
MGI SNP Detail		 Chr11:120599177 Aspscr1 within coordinates of
Gm17178 within coordinates of
Tssr106341 234 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T T T C C C T C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs585738119
MGI SNP Detail		 Chr11:120599274 Aspscr1 within coordinates of
Gm17178 within coordinates of
Tssr106341 331 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs252097392
MGI SNP Detail		 Chr11:120599558 Aspscr1 within coordinates of
Gm17178 within coordinates of
Tssr106341 615 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs218870000
MGI SNP Detail		 Chr11:120599708 Aspscr1 within coordinates of
Gm17178 within coordinates of
Tssr106341 765 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs233803647
MGI SNP Detail		 Chr11:120599719 Aspscr1 within coordinates of
Gm17178 within coordinates of
Tssr106341 776 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245835502
MGI SNP Detail		 Chr11:120599913 Aspscr1 within coordinates of
Gm17178 within coordinates of
Tssr106341 970 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs215087090
MGI SNP Detail		 Chr11:120600099 Aspscr1 within coordinates of
Gm17178 within coordinates of
Tssr106341 1156 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232043052
MGI SNP Detail		 Chr11:120600119 Aspscr1 within coordinates of
Gm17178 within coordinates of
Tssr106341 1176 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249650670
MGI SNP Detail		 Chr11:120600161 Aspscr1 within coordinates of
Gm17178 within coordinates of
Tssr106341 1218 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs49144712
MGI SNP Detail		 Chr11:120600227 Aspscr1 within coordinates of
Gm17178 within coordinates of
Tssr106341 1284 bp downstream
 SNP A A A
rs213285774
MGI SNP Detail		 Chr11:120600241 Aspscr1 within coordinates of
Gm17178 within coordinates of
Tssr106341 1298 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs234747016
MGI SNP Detail		 Chr11:120600425 Tssr106341 1482 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264261429
MGI SNP Detail		 Chr11:120600662 Tssr106341 1719 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225897815
MGI SNP Detail		 Chr11:120600788 Tssr106341 1845 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs234974395
MGI SNP Detail		 Chr11:120600824 Tssr106341 1881 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A A A G G G A A G G G G
rs253102567
MGI SNP Detail		 Chr11:120600931 Tssr106341 1988 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220523053
MGI SNP Detail		 Chr11:120600936 Tssr106341 1993 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs239215661
MGI SNP Detail		 Chr11:120600942 Tssr106341 1999 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T T T C C C T C C C C C
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Showing SNP(s) 1 - 42 of 42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory