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Mouse SNP Summary
Symbol
Name
ID 		Tssr106448
transcription start site region 106448
MGI:6034215

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Showing SNP(s) 1 - 79 of 79

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs235729575
MGI SNP Detail		 Chr11:3120925 Sfi1 within coordinates of
Tssr106448 1870 bp downstream
 SNP T T T
rs247385191
MGI SNP Detail		 Chr11:3121027 Sfi1 within coordinates of
Tssr106448 1768 bp downstream
 SNP G G G
rs249681160
MGI SNP Detail		 Chr11:3121073 Sfi1 within coordinates of
Tssr106448 1722 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215323219
MGI SNP Detail		 Chr11:3121103 Sfi1 within coordinates of
Tssr106448 1692 bp downstream
 SNP A A A
rs232961501
MGI SNP Detail		 Chr11:3121172 Sfi1 within coordinates of
Tssr106448 1623 bp downstream
 SNP G G G
rs257110606
MGI SNP Detail		 Chr11:3121256 Sfi1 within coordinates of
Tssr106448 1539 bp downstream
 SNP G G G
rs221613128
MGI SNP Detail		 Chr11:3121263 Sfi1 within coordinates of
Tssr106448 1532 bp downstream
 SNP G G G
rs235038723
MGI SNP Detail		 Chr11:3121349 Sfi1 within coordinates of
Tssr106448 1446 bp downstream
 SNP C C C
rs584014452
MGI SNP Detail		 Chr11:3121578 Sfi1 within coordinates of
Tssr106448 1217 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs264392667
MGI SNP Detail		 Chr11:3121629 Sfi1 within coordinates of
Tssr106448 1166 bp downstream
 SNP T T T
rs222170989
MGI SNP Detail		 Chr11:3121632 Sfi1 within coordinates of
Tssr106448 1163 bp downstream
 SNP G G G
rs214864263
MGI SNP Detail		 Chr11:3121657 Sfi1 within coordinates of
Tssr106448 1138 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs236397050
MGI SNP Detail		 Chr11:3121667 Sfi1 within coordinates of
Tssr106448 1128 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs240282644
MGI SNP Detail		 Chr11:3121738 Sfi1 within coordinates of
Tssr106448 1057 bp downstream
 SNP T T T
rs251043888
MGI SNP Detail		 Chr11:3121767 Sfi1 within coordinates of
Tssr106448 1028 bp downstream
 SNP C C C
rs219836884
MGI SNP Detail		 Chr11:3121768 Sfi1 within coordinates of
Tssr106448 1027 bp downstream
 SNP T T T
rs245587196
MGI SNP Detail		 Chr11:3121844 Sfi1 within coordinates of
Tssr106448 951 bp downstream
 SNP T T T
rs261778101
MGI SNP Detail		 Chr11:3121868 Sfi1 within coordinates of
Tssr106448 927 bp downstream
 SNP A A A
rs228194636
MGI SNP Detail		 Chr11:3121975 Sfi1 within coordinates of
Tssr106448 820 bp downstream
 SNP T T T
rs248291434
MGI SNP Detail		 Chr11:3121981 Sfi1 within coordinates of
Tssr106448 814 bp downstream
 SNP A A A
rs265898784
MGI SNP Detail		 Chr11:3122016 Sfi1 within coordinates of
Tssr106448 779 bp downstream
 SNP A A A
rs228019241
MGI SNP Detail		 Chr11:3122066 Sfi1 within coordinates of
Tssr106448 729 bp downstream
 SNP C C C
rs243640253
MGI SNP Detail		 Chr11:3122162 Sfi1 within coordinates of
Tssr106448 633 bp downstream
 SNP C/T C T
rs29453289
MGI SNP Detail		 Chr11:3122169 Sfi1 within coordinates of
Tssr106448 626 bp downstream
 SNP A/G G A
rs246313922
MGI SNP Detail		 Chr11:3122355 Cpgi2457 within coordinates of
Sfi1 within coordinates of
Tssr106448 440 bp downstream
 SNP C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs220889601
MGI SNP Detail		 Chr11:3122381 Cpgi2457 within coordinates of
Sfi1 within coordinates of
Tssr106448 414 bp downstream
 SNP A/G A A A A G
rs244670976
MGI SNP Detail		 Chr11:3122426 Cpgi2457 within coordinates of
Sfi1 within coordinates of
Tssr106448 369 bp downstream
 SNP C/T T T T C
rs215359239
MGI SNP Detail		 Chr11:3122444 Cpgi2457 within coordinates of
Sfi1 within coordinates of
Tssr106448 351 bp downstream
 SNP C C C
rs263868210
MGI SNP Detail		 Chr11:3122453 Cpgi2457 within coordinates of
Sfi1 within coordinates of
Tssr106448 342 bp downstream
 SNP A/G A A G
rs229067689
MGI SNP Detail		 Chr11:3122462 Cpgi2457 within coordinates of
Sfi1 within coordinates of
Tssr106448 333 bp downstream
 SNP A/C A A C
rs245032238
MGI SNP Detail		 Chr11:3122485 Cpgi2457 within coordinates of
Sfi1 within coordinates of
Tssr106448 310 bp downstream
 SNP C/T T T T C
rs226725783
MGI SNP Detail		 Chr11:3122502 Cpgi2457 within coordinates of
Sfi1 within coordinates of
Tssr106448 293 bp downstream
 SNP T T T
rs225116444
MGI SNP Detail		 Chr11:3122506 Cpgi2457 within coordinates of
Sfi1 within coordinates of
Tssr106448 289 bp downstream
 SNP G/T T T G
rs251377770
MGI SNP Detail		 Chr11:3122525 Cpgi2457 within coordinates of
Sfi1 within coordinates of
Tssr106448 270 bp downstream
 SNP C/T T C
rs212244493
MGI SNP Detail		 Chr11:3122530 Cpgi2457 within coordinates of
Sfi1 within coordinates of
Tssr106448 265 bp downstream
 SNP C/T C T
rs235431428
MGI SNP Detail		 Chr11:3122556 Cpgi2457 within coordinates of
Sfi1 within coordinates of
Tssr106448 239 bp downstream
 SNP A/G A G
rs255399088
MGI SNP Detail		 Chr11:3122578 Cpgi2457 within coordinates of
Sfi1 within coordinates of
Tssr106448 217 bp downstream
 SNP T T T
rs212889094
MGI SNP Detail		 Chr11:3122646 Sfi1 within coordinates of
Tssr106448 149 bp downstream
 SNP A A A
rs216719655
MGI SNP Detail		 Chr11:3122770 Sfi1 within coordinates of
Tssr106448 25 bp downstream
 SNP G/T G G G T
rs236571405
MGI SNP Detail		 Chr11:3122771 Sfi1 within coordinates of
Tssr106448 24 bp downstream
 SNP A/G A A A G
rs252999678
MGI SNP Detail		 Chr11:3122912 Sfi1 within coordinates of
Tssr106448 115 bp upstream
 SNP G G G G G G G G G G G
rs236752769
MGI SNP Detail		 Chr11:3122917 Sfi1 within coordinates of
Tssr106448 120 bp upstream
 SNP G G G
rs261196299
MGI SNP Detail		 Chr11:3123056 Sfi1 within coordinates of
Tssr106448 259 bp upstream
 SNP A A A
rs216981719
MGI SNP Detail		 Chr11:3123236 Sfi1 within coordinates of
Tssr106448 439 bp upstream
 SNP T T T
rs258104377
MGI SNP Detail		 Chr11:3123281 Cpgi2458 within coordinates of
Sfi1 within coordinates of
Tssr106448 484 bp upstream
 SNP C/T C C C C C C C C C C C C C C C T C
rs233825632
MGI SNP Detail		 Chr11:3123351 Cpgi2458 within coordinates of
Sfi1 within coordinates of
Tssr106448 554 bp upstream
 SNP C C C
rs242602025
MGI SNP Detail		 Chr11:3123394 Cpgi2458 within coordinates of
Sfi1 within coordinates of
Tssr106448 597 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs251437964
MGI SNP Detail		 Chr11:3123406 Cpgi2458 within coordinates of
Sfi1 within coordinates of
Tssr106448 609 bp upstream
 SNP T T T
rs219907150
MGI SNP Detail		 Chr11:3123407 Cpgi2458 within coordinates of
Sfi1 within coordinates of
Tssr106448 610 bp upstream
 SNP G G G
rs242843450
MGI SNP Detail		 Chr11:3123424 Cpgi2458 within coordinates of
Sfi1 within coordinates of
Tssr106448 627 bp upstream
 SNP C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs261309741
MGI SNP Detail		 Chr11:3123442 Cpgi2458 within coordinates of
Sfi1 within coordinates of
Tssr106448 645 bp upstream
 SNP G G G
rs219877336
MGI SNP Detail		 Chr11:3123455 Cpgi2458 within coordinates of
Sfi1 within coordinates of
Tssr106448 658 bp upstream
 SNP C C C
rs222334088
MGI SNP Detail		 Chr11:3123467 Cpgi2458 within coordinates of
Sfi1 within coordinates of
Tssr106448 670 bp upstream
 SNP A/T T T T T T T T T T T T T A T T T T T T T T T T T T T T T A T T
rs239019915
MGI SNP Detail		 Chr11:3123468 Cpgi2458 within coordinates of
Sfi1 within coordinates of
Tssr106448 671 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G
rs257893266
MGI SNP Detail		 Chr11:3123571 Cpgi2458 within coordinates of
Sfi1 within coordinates of
Tssr106448 774 bp upstream
 SNP A/G A G
rs229556268
MGI SNP Detail		 Chr11:3123665 Cpgi2458 within coordinates of
Sfi1 within coordinates of
Tssr106448 868 bp upstream
 SNP C/G C G
rs250734976
MGI SNP Detail		 Chr11:3123707 Cpgi2458 within coordinates of
Sfi1 within coordinates of
Tssr106448 910 bp upstream
 SNP T T T
rs260628014
MGI SNP Detail		 Chr11:3123710 Cpgi2458 within coordinates of
Sfi1 within coordinates of
Tssr106448 913 bp upstream
 SNP C C C
rs26899971
MGI SNP Detail		 Chr11:3123782 Cpgi2458 within coordinates of
Sfi1 within coordinates of
Tssr106448 985 bp upstream
 SNP A/T A A A A A A T A A A A T A
rs228056689
MGI SNP Detail		 Chr11:3123814 Sfi1 within coordinates of
Tssr106448 1017 bp upstream
 SNP C C C
rs240451073
MGI SNP Detail		 Chr11:3123827 Sfi1 within coordinates of
Tssr106448 1030 bp upstream
 SNP A A A
rs229218083
MGI SNP Detail		 Chr11:3123879 Sfi1 within coordinates of
Tssr106448 1082 bp upstream
 SNP A/T A A A A A A A A T A
rs253850324
MGI SNP Detail		 Chr11:3123968 Sfi1 within coordinates of
Tssr106448 1171 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs258209497
MGI SNP Detail		 Chr11:3123974 Sfi1 within coordinates of
Tssr106448 1177 bp upstream
 SNP A/G G A
rs231426450
MGI SNP Detail		 Chr11:3124048 Sfi1 within coordinates of
Tssr106448 1251 bp upstream
 SNP A A A
rs250859565
MGI SNP Detail		 Chr11:3124217 Sfi1 within coordinates of
Tssr106448 1420 bp upstream
 SNP C C C
rs213434465
MGI SNP Detail		 Chr11:3124234 Sfi1 within coordinates of
Tssr106448 1437 bp upstream
 SNP C C C
rs227767246
MGI SNP Detail		 Chr11:3124396 Sfi1 within coordinates of
Tssr106448 1599 bp upstream
 SNP A A A
rs260244797
MGI SNP Detail		 Chr11:3124447 Sfi1 within coordinates of
Tssr106448 1650 bp upstream
 SNP G G G
rs217011003
MGI SNP Detail		 Chr11:3124475 Sfi1 within coordinates of
Tssr106448 1678 bp upstream
 SNP C C C
rs233902333
MGI SNP Detail		 Chr11:3124484 Sfi1 within coordinates of
Tssr106448 1687 bp upstream
 SNP G G G
rs251511324
MGI SNP Detail		 Chr11:3124520 Sfi1 within coordinates of
Tssr106448 1723 bp upstream
 SNP T T T
rs214654896
MGI SNP Detail		 Chr11:3124521 Sfi1 within coordinates of
Tssr106448 1724 bp upstream
 SNP G G G
rs237809432
MGI SNP Detail		 Chr11:3124660 Sfi1 within coordinates of
Tssr106448 1863 bp upstream
 SNP C C C
rs256071459
MGI SNP Detail		 Chr11:3124675 Sfi1 within coordinates of
Tssr106448 1878 bp upstream
 SNP C/T C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219779320
MGI SNP Detail		 Chr11:3124709 Sfi1 within coordinates of
Tssr106448 1912 bp upstream
 SNP C/T T C
rs580444590
MGI SNP Detail		 Chr11:3124764 Sfi1 within coordinates of
Tssr106448 1967 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs239990769
MGI SNP Detail		 Chr11:3124767 Sfi1 within coordinates of
Tssr106448 1970 bp upstream
 SNP G G G
rs254000264
MGI SNP Detail		 Chr11:3124783 Sfi1 within coordinates of
Tssr106448 1986 bp upstream
 SNP C C C
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Showing SNP(s) 1 - 79 of 79
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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