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Mouse SNP Summary
Symbol
Name
ID 		Tssr107050
transcription start site region 107050
MGI:6034817

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Showing SNP(s) 1 - 61 of 61

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs246195594
MGI SNP Detail		 Chr11:20779234 Lgalsl within coordinates of
Tssr107050 1989 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs216925492
MGI SNP Detail		 Chr11:20779305 Lgalsl within coordinates of
Tssr107050 1918 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229538364
MGI SNP Detail		 Chr11:20779327 Lgalsl within coordinates of
Tssr107050 1896 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242684183
MGI SNP Detail		 Chr11:20779422 Lgalsl within coordinates of
Tssr107050 1801 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs212891189
MGI SNP Detail		 Chr11:20779845 Lgalsl within coordinates of
Tssr107050 1378 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs238200339
MGI SNP Detail		 Chr11:20779984 Lgalsl within coordinates of
Tssr107050 1239 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29438698
MGI SNP Detail		 Chr11:20779986 Lgalsl within coordinates of
Tssr107050 1237 bp downstream
 SNP G/T G T T G T G
rs216436545
MGI SNP Detail		 Chr11:20779994 Lgalsl within coordinates of
Tssr107050 1229 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234968408
MGI SNP Detail		 Chr11:20780009 Lgalsl within coordinates of
Tssr107050 1214 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29487165
MGI SNP Detail		 Chr11:20780160 Lgalsl within coordinates of
Tssr107050 1063 bp downstream
 SNP C/T C T T C T C
rs223374533
MGI SNP Detail		 Chr11:20780174 Lgalsl within coordinates of
Tssr107050 1049 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs237133334
MGI SNP Detail		 Chr11:20780194 Lgalsl within coordinates of
Tssr107050 1029 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs261558675
MGI SNP Detail		 Chr11:20780240 Lgalsl within coordinates of
Tssr107050 983 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29477240
MGI SNP Detail		 Chr11:20780297 Cpgi2627 within coordinates of
Lgalsl within coordinates of
Tssr107050 926 bp downstream
 SNP A/G A G G A
rs246537730
MGI SNP Detail		 Chr11:20780317 Cpgi2627 within coordinates of
Lgalsl within coordinates of
Tssr107050 906 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs263020438
MGI SNP Detail		 Chr11:20780373 Cpgi2627 within coordinates of
Lgalsl within coordinates of
Tssr107050 850 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C T C C C T C C C C C C C C C C C C
rs29428205
MGI SNP Detail		 Chr11:20780615 Cpgi2627 within coordinates of
Lgalsl within coordinates of
Tssr107050 608 bp downstream
 SNP A/T A T
rs29398470
MGI SNP Detail		 Chr11:20780650 Cpgi2627 within coordinates of
Lgalsl within coordinates of
Tssr107050 573 bp downstream
 SNP C/G C G C G
rs229506680
MGI SNP Detail		 Chr11:20780720 Cpgi2627 within coordinates of
Lgalsl within coordinates of
Tssr107050 503 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs241919885
MGI SNP Detail		 Chr11:20780721 Cpgi2627 within coordinates of
Lgalsl within coordinates of
Tssr107050 502 bp downstream
 SNP A/G G A
rs213761852
MGI SNP Detail		 Chr11:20780732 Cpgi2627 within coordinates of
Lgalsl within coordinates of
Tssr107050 491 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs230035674
MGI SNP Detail		 Chr11:20780768 Cpgi2627 within coordinates of
Lgalsl within coordinates of
Tssr107050 455 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs256315912
MGI SNP Detail		 Chr11:20780960 Cpgi2627 within coordinates of
Lgalsl within coordinates of
Tssr107050 263 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs215826453
MGI SNP Detail		 Chr11:20781189 Cpgi2627 within coordinates of
Rr443483 within coordinates of
Tssr107048 within coordinates of
Tssr107050 34 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs234928596
MGI SNP Detail		 Chr11:20781229 Cpgi2627 within coordinates of
Rr443483 within coordinates of
Tssr107050 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254616185
MGI SNP Detail		 Chr11:20781268 Cpgi2627 within coordinates of
Rr443483 within coordinates of
Tssr107050 3 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217278772
MGI SNP Detail		 Chr11:20781315 Cpgi2627 within coordinates of
Rr443483 within coordinates of
Tssr107050 50 bp upstream
Tssr107051 within coordinates of
 SNP A/G/T A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A T A A G
rs229823982
MGI SNP Detail		 Chr11:20781479 Cpgi2627 within coordinates of
Gm12037 within coordinates of
Rr443484 within coordinates of
Tssr107050 214 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256245437
MGI SNP Detail		 Chr11:20781520 Cpgi2627 within coordinates of
Gm12037 within coordinates of
Rr443484 within coordinates of
Tssr107050 255 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs222035178
MGI SNP Detail		 Chr11:20781659 Cpgi2627 within coordinates of
Gm12037 within coordinates of
Rr443484 within coordinates of
Tssr107050 394 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs50676917
MGI SNP Detail		 Chr11:20781674 Cpgi2627 within coordinates of
Gm12037 within coordinates of
Rr443484 within coordinates of
Tssr107050 409 bp upstream
 SNP C/T T C C
rs244101977
MGI SNP Detail		 Chr11:20781697 Gm12037 within coordinates of
Rr443484 within coordinates of
Tssr107050 432 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T C T T T C T T T T T T T T T T T T
rs262702054
MGI SNP Detail		 Chr11:20781844 Gm12037 within coordinates of
Rr443484 within coordinates of
Tssr107050 579 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221191029
MGI SNP Detail		 Chr11:20781885 Gm12037 within coordinates of
Rr443484 within coordinates of
Tssr107050 620 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs240597935
MGI SNP Detail		 Chr11:20781961 Rr443485 within coordinates of
Tssr107050 696 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A G A A A G A A A A A A A A A A A A
rs259662566
MGI SNP Detail		 Chr11:20782026 Rr443485 within coordinates of
Tssr107050 761 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222976200
MGI SNP Detail		 Chr11:20782064 Rr443485 within coordinates of
Tssr107050 799 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244412308
MGI SNP Detail		 Chr11:20782148 Rr443485 within coordinates of
Tssr107050 883 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs262089143
MGI SNP Detail		 Chr11:20782193 Rr443485 within coordinates of
Tssr107050 928 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230602532
MGI SNP Detail		 Chr11:20782206 Tssr107050 941 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251888147
MGI SNP Detail		 Chr11:20782283 Tssr107050 1018 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T C T T T C T T T T T T T T T T T T
rs265514593
MGI SNP Detail		 Chr11:20782400 Tssr107050 1135 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228154650
MGI SNP Detail		 Chr11:20782477 Tssr107050 1212 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs259264724
MGI SNP Detail		 Chr11:20782516 Tssr107050 1251 bp upstream
 SNP C/T C T
rs217641746
MGI SNP Detail		 Chr11:20782532 Tssr107050 1267 bp upstream
 SNP A/T A A A A T A A A A A A A A A A A A A A A A T A A A A A A A A A A T A T T A A A T A A A T A A A A A A T A A
rs215831391
MGI SNP Detail		 Chr11:20782549 Tssr107050 1284 bp upstream
 SNP A/G A G
rs253927246
MGI SNP Detail		 Chr11:20782573 Tssr107050 1308 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C T C C C T C C C C C C C C C C C C
rs213643625
MGI SNP Detail		 Chr11:20782605 Tssr107050 1340 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs238956074
MGI SNP Detail		 Chr11:20782654 Tssr107050 1389 bp upstream
 SNP C/T C C C C T C C C C C C C C C C C C C C T C T T C C C C T C C C C T C T T T C C T T C C T C C C C T C T C C
rs258657649
MGI SNP Detail		 Chr11:20782922 Tssr107050 1657 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs221155110
MGI SNP Detail		 Chr11:20782923 Tssr107050 1658 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A G A A A G A A A A A A A A A A A A
rs236678675
MGI SNP Detail		 Chr11:20782957 Tssr107050 1692 bp upstream
 SNP C/T T C
rs253005761
MGI SNP Detail		 Chr11:20782980 Tssr107050 1715 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217731882
MGI SNP Detail		 Chr11:20783017 Tssr107050 1752 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C A C C C A C C C C C C A C C C C
rs241933095
MGI SNP Detail		 Chr11:20783073 Tssr107050 1808 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264924844
MGI SNP Detail		 Chr11:20783097 Tssr107050 1832 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G A G G G A G G G G G G G G G G G G
rs222846814
MGI SNP Detail		 Chr11:20783098 Tssr107050 1833 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A G A A A G A A A A A A A A A A A A
rs247285837
MGI SNP Detail		 Chr11:20783116 Tssr107050 1851 bp upstream
 SNP C/T T T T T C T T T T T T T T T T T T T T T T C T T T T T T T T T T C T C C T T T C T T T C T T T T T T C T T
rs259516272
MGI SNP Detail		 Chr11:20783132 Tssr107050 1867 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C T C C C T C C C C C C C T C C C C
rs228132785
MGI SNP Detail		 Chr11:20783170 Tssr107050 1905 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G A G G G A G G G G G G G A G G G G
rs248052473
MGI SNP Detail		 Chr11:20783245 Tssr107050 1980 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T C T T T C T T T T T T T T T T T T
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Showing SNP(s) 1 - 61 of 61
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory