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Mouse SNP Summary
Symbol
Name
ID 		Tssr107876
transcription start site region 107876
MGI:6035643

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Showing SNP(s) 1 - 71 of 71

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs26977579
MGI SNP Detail		 Chr11:52169231 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1803 bp downstream
 SNP A/G G G A G A G G
rs231890808
MGI SNP Detail		 Chr11:52169235 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1799 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs8243032
MGI SNP Detail		 Chr11:52169433 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1601 bp downstream
 SNP C/T C C C C C C C C C C C T
rs8243031
MGI SNP Detail		 Chr11:52169451 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1583 bp downstream
 SNP A/G A A A A A A A A A A A G
rs8243030
MGI SNP Detail		 Chr11:52169452 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1582 bp downstream
 SNP A/G A A A A A A A A A A A G
rs8243029
MGI SNP Detail		 Chr11:52169504 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1530 bp downstream
 SNP G/T T T T T T T T T T T T G
rs226360996
MGI SNP Detail		 Chr11:52169639 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1395 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs235983671
MGI SNP Detail		 Chr11:52169712 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1322 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs8242988
MGI SNP Detail		 Chr11:52169725 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1309 bp downstream
 SNP C/T T T T T T T T T T T C
rs8242989
MGI SNP Detail		 Chr11:52169734 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1300 bp downstream
 SNP A/G A A A A A A A A A A A A G
rs8242991
MGI SNP Detail		 Chr11:52169803 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1231 bp downstream
 SNP G/T T T T T T T T G T T G
rs29480937
MGI SNP Detail		 Chr11:52169896 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1138 bp downstream
 SNP A/G A A A G G A
rs257167597
MGI SNP Detail		 Chr11:52169951 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1083 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs8242996
MGI SNP Detail		 Chr11:52169981 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1053 bp downstream
 SNP C/T C C C C C T C C C
rs8242995
MGI SNP Detail		 Chr11:52170038 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 996 bp downstream
 SNP C/T C C C C C C T C C C C
rs8242994
MGI SNP Detail		 Chr11:52170116 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 918 bp downstream
 SNP A/G G G G G G G G G A
rs8242993
MGI SNP Detail		 Chr11:52170128 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 906 bp downstream
 SNP C/T C C C C C C C C C C T
rs8243000
MGI SNP Detail		 Chr11:52170318 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 716 bp downstream
 SNP C/T C C C C C C C T C C
rs256975239
MGI SNP Detail		 Chr11:52170322 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 712 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C C A C C C C C C C C C C C C
rs225818319
MGI SNP Detail		 Chr11:52170330 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 704 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs8242999
MGI SNP Detail		 Chr11:52170346 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 688 bp downstream
 SNP C/T T T T T T T T T C T T T
rs8242998
MGI SNP Detail		 Chr11:52170371 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 663 bp downstream
 SNP A/C C C C C C C C C C C A C C C C C C
rs8242997
MGI SNP Detail		 Chr11:52170420 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 614 bp downstream
 SNP C/T C C C C C C C C T C C C
rs254140395
MGI SNP Detail		 Chr11:52170430 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 604 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219430201
MGI SNP Detail		 Chr11:52170531 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 503 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs26977578
MGI SNP Detail		 Chr11:52170595 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 439 bp downstream
 SNP A/G G G G A
rs8243001
MGI SNP Detail		 Chr11:52170679 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 355 bp downstream
 SNP C/T T C C T
rs26977577
MGI SNP Detail		 Chr11:52170758 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 276 bp downstream
 SNP C/G G G G C G C G G
rs26977576
MGI SNP Detail		 Chr11:52170807 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 227 bp downstream
 SNP C/T T T T C T T C
rs250941373
MGI SNP Detail		 Chr11:52170835 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr101334 within coordinates of
Tssr107876 199 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs224907151
MGI SNP Detail		 Chr11:52170845 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr101334 within coordinates of
Tssr107876 189 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs8243004
MGI SNP Detail		 Chr11:52170867 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 167 bp downstream
 SNP C/T T T T T T T T T T T T C
rs8243003
MGI SNP Detail		 Chr11:52170890 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 144 bp downstream
 SNP A/G A A A A A A A A A G
rs219926929
MGI SNP Detail		 Chr11:52170905 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 129 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs8243002
MGI SNP Detail		 Chr11:52170980 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 54 bp downstream
 SNP A/G A A A A A A A A A A A A G
rs256915469
MGI SNP Detail		 Chr11:52171030 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 4 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs580616935
MGI SNP Detail		 Chr11:52171096 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 48 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs225970077
MGI SNP Detail		 Chr11:52171130 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 82 bp upstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs239744754
MGI SNP Detail		 Chr11:52171163 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 115 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs265523882
MGI SNP Detail		 Chr11:52171176 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 128 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs8243037
MGI SNP Detail		 Chr11:52171224 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 176 bp upstream
 SNP A/G A A A A A A A A A G G G A G G A G
rs259631296
MGI SNP Detail		 Chr11:52171242 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 194 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219799802
MGI SNP Detail		 Chr11:52171247 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 199 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs8243036
MGI SNP Detail		 Chr11:52171318 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 270 bp upstream
 SNP C/T C C C C C C C C C C C C T
rs8243035
MGI SNP Detail		 Chr11:52171367 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 319 bp upstream
 SNP A/C A A A A A A A A A A A C
rs213409770
MGI SNP Detail		 Chr11:52171403 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 355 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs8243034
MGI SNP Detail		 Chr11:52171414 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 366 bp upstream
 SNP A/C C C C C C C C A C C C C
rs251067686
MGI SNP Detail		 Chr11:52171491 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 443 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216770024
MGI SNP Detail		 Chr11:52171520 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 472 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs239194853
MGI SNP Detail		 Chr11:52171610 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 562 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264191652
MGI SNP Detail		 Chr11:52171694 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 646 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs8243045
MGI SNP Detail		 Chr11:52171884 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 836 bp upstream
 SNP A/G G G G G G G G G G G G G G A
rs8243038
MGI SNP Detail		 Chr11:52171969 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 921 bp upstream
 SNP C/T T T T T T T T T T C T T T
rs251115258
MGI SNP Detail		 Chr11:52172054 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1006 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs8243013
MGI SNP Detail		 Chr11:52172173 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1125 bp upstream
 SNP A/G G G G G G A G G G
rs8243012
MGI SNP Detail		 Chr11:52172174 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1126 bp upstream
 SNP A/C C C C C C C C C A
rs263285086
MGI SNP Detail		 Chr11:52172306 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1258 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C C A C C C C C C C C C C C C
rs8243006
MGI SNP Detail		 Chr11:52172363 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1315 bp upstream
 SNP A/G G G G G G G A G A
rs247551446
MGI SNP Detail		 Chr11:52172495 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1447 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs266234401
MGI SNP Detail		 Chr11:52172504 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1456 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223873758
MGI SNP Detail		 Chr11:52172551 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1503 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs243286769
MGI SNP Detail		 Chr11:52172561 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1513 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs255702485
MGI SNP Detail		 Chr11:52172647 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1599 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs226396724
MGI SNP Detail		 Chr11:52172755 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1707 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs256954202
MGI SNP Detail		 Chr11:52172759 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1711 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs8243018
MGI SNP Detail		 Chr11:52172783 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1735 bp upstream
 SNP A/C C C C C C C C C C C A
rs241659481
MGI SNP Detail		 Chr11:52172784 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1736 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs8243017
MGI SNP Detail		 Chr11:52172885 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1837 bp upstream
 SNP C/T T T T T T T T C C C T C C T C
rs8243016
MGI SNP Detail		 Chr11:52172893 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1845 bp upstream
 SNP A/G A A A A A A G A A A A G
rs8243015
MGI SNP Detail		 Chr11:52172927 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1879 bp upstream
 SNP G/T G G G G G G G G T T G T T G G
rs8243014
MGI SNP Detail		 Chr11:52172985 A630014C17Rik within coordinates of
Tcf7 within coordinates of
Tssr107876 1937 bp upstream
 SNP C/G C C C C C C C G G G C G G C G
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Showing SNP(s) 1 - 71 of 71
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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