About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Tssr108046
transcription start site region 108046
MGI:6035813

<< first < prev1 next > last >>
Showing SNP(s) 1 - 94 of 94

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs26945179
MGI SNP Detail
Alliance Variant
Chr11:55040525 Slc36a3 Intron
Slc36a3 mRNA-UTR
Tssr108046 1980 bp downstream
SNP A/T A A A A A A A T A T
rs26945178
MGI SNP Detail
Alliance Variant
Chr11:55040554 Slc36a3 Intron
Slc36a3 mRNA-UTR
Tssr108046 1951 bp downstream
SNP G/T G G G G G G G G T G T G
rs234900637
MGI SNP Detail
Alliance Variant
Chr11:55040629 Slc36a3 Coding-Synonymous
Slc36a3 Intron
Tssr108046 1876 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240960992
MGI SNP Detail
Alliance Variant
Chr11:55040667 Slc36a3 Coding-NonSynonymous
Slc36a3 Intron
Tssr108046 1838 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G A G G G G G G G G G G G G
rs264805426
MGI SNP Detail
Alliance Variant
Chr11:55040686 Slc36a3 Coding-Synonymous
Slc36a3 Intron
Tssr108046 1819 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229539046
MGI SNP Detail
Alliance Variant
Chr11:55040694 Slc36a3 Coding-NonSynonymous
Slc36a3 Intron
Tssr108046 1811 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245505028
MGI SNP Detail
Alliance Variant
Chr11:55040742 Slc36a3 Coding-NonSynonymous
Slc36a3 Intron
Tssr108046 1763 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214895921
MGI SNP Detail
Alliance Variant
Chr11:55040788 Slc36a3 Intron
Tssr108046 1717 bp downstream
SNP A/G A A A A A G A A A A A A G G A A A A G G A A G A A A A G A A A A A G A A G G G A A A A A A A A A G A A A A
rs227812196
MGI SNP Detail
Alliance Variant
Chr11:55040816 Slc36a3 Intron
Tssr108046 1689 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs247653405
MGI SNP Detail
Alliance Variant
Chr11:55040876 Slc36a3 Intron
Tssr108046 1629 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs26945177
MGI SNP Detail
Alliance Variant
Chr11:55040941 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 1564 bp downstream
SNP A/G A A A A A A G A A G A G A
rs586416587
MGI SNP Detail
Alliance Variant
Chr11:55041129 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 1376 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs580485250
MGI SNP Detail
Alliance Variant
Chr11:55041130 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 1375 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs243396304
MGI SNP Detail
Alliance Variant
Chr11:55041162 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 1343 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255721805
MGI SNP Detail
Alliance Variant
Chr11:55041194 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 1311 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs26945176
MGI SNP Detail
Alliance Variant
Chr11:55041265 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 1240 bp downstream
SNP A/G G G G G G G A G G G G G G G
rs231600173
MGI SNP Detail
Alliance Variant
Chr11:55041273 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 1232 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250633547
MGI SNP Detail
Alliance Variant
Chr11:55041278 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 1227 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs220862890
MGI SNP Detail
Alliance Variant
Chr11:55041367 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 1138 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs240105250
MGI SNP Detail
Alliance Variant
Chr11:55041382 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 1123 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs263736459
MGI SNP Detail
Alliance Variant
Chr11:55041424 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 1081 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226629674
MGI SNP Detail
Alliance Variant
Chr11:55041425 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 1080 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243871306
MGI SNP Detail
Alliance Variant
Chr11:55041507 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 998 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261865754
MGI SNP Detail
Alliance Variant
Chr11:55041547 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 958 bp downstream
SNP C/T C C C C C T C C C C C C T T C C C C T T C C T C C C C T T T C C C T C C T T T C T C C C C C C C T C C C C
rs26945175
MGI SNP Detail
Alliance Variant
Chr11:55041551 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 954 bp downstream
SNP C/T T T T T T C T T T C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs230039678
MGI SNP Detail
Alliance Variant
Chr11:55041558 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 947 bp downstream
SNP A/G A A A A A G A A A A A A G G A A A A G G A A G A A A A G G G A A A G A A G G G A G A A A A A A A G A A A G
rs26945174
MGI SNP Detail
Alliance Variant
Chr11:55041609 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 896 bp downstream
SNP A/G A A A A A A G A A G A G G A
rs258880036
MGI SNP Detail
Alliance Variant
Chr11:55041631 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 874 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs227826862
MGI SNP Detail
Alliance Variant
Chr11:55041633 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 872 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs247663019
MGI SNP Detail
Alliance Variant
Chr11:55041653 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 852 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs26945173
MGI SNP Detail
Alliance Variant
Chr11:55041666 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 839 bp downstream
SNP A/G A A A A A A G A A G A A A G A
rs234198549
MGI SNP Detail
Alliance Variant
Chr11:55041740 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 765 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs253334001
MGI SNP Detail
Alliance Variant
Chr11:55041747 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 758 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs213143826
MGI SNP Detail
Alliance Variant
Chr11:55041766 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 739 bp downstream
SNP G/T G G G G G T G G G G G G T T G G G G T G G G G G G G G T G G G G G T G G T T T G G G G G G G G G G G G G G
rs231656695
MGI SNP Detail
Alliance Variant
Chr11:55041785 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 720 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs244756769
MGI SNP Detail
Alliance Variant
Chr11:55041795 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 710 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215313675
MGI SNP Detail
Alliance Variant
Chr11:55041834 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 671 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs233648469
MGI SNP Detail
Alliance Variant
Chr11:55041926 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 579 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260302207
MGI SNP Detail
Alliance Variant
Chr11:55041954 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 551 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs227159820
MGI SNP Detail
Alliance Variant
Chr11:55041958 Gm31688 within coordinates of
Slc36a3 Intron
Tssr108046 547 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs13481035
MGI SNP Detail
Alliance Variant
Chr11:55041963 Gm31688 within coordinates of
Slc36a3 Intron
Slc36a3 Splice-Site
Tssr108046 542 bp downstream
SNP C/T T T T C C T T T C C C C C C T C C T C T T C C C T T C T C C T T C C C C C C T C T C C T T C C
rs261519490
MGI SNP Detail
Alliance Variant
Chr11:55041980 Gm31688 within coordinates of
Slc36a3 Intron
Slc36a3 mRNA-UTR
Tssr108046 525 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219496091
MGI SNP Detail
Alliance Variant
Chr11:55042082 Gm31688 within coordinates of
Slc36a3 Coding-Synonymous
Slc36a3 mRNA-UTR
Tssr108046 423 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs239538939
MGI SNP Detail
Alliance Variant
Chr11:55042083 Gm31688 within coordinates of
Slc36a3 Coding-NonSynonymous
Slc36a3 mRNA-UTR
Tssr108046 422 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs258888808
MGI SNP Detail
Alliance Variant
Chr11:55042133 Gm31688 within coordinates of
Slc36a3 Coding-Synonymous
Slc36a3 mRNA-UTR
Tssr108046 372 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs221548269
MGI SNP Detail
Alliance Variant
Chr11:55042138 Gm31688 within coordinates of
Slc36a3 Coding-NonSynonymous
Slc36a3 mRNA-UTR
Tssr108046 367 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241721900
MGI SNP Detail
Alliance Variant
Chr11:55042139 Gm31688 within coordinates of
Slc36a3 Coding-NonSynonymous
Slc36a3 mRNA-UTR
Tssr108046 366 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs26945171
MGI SNP Detail
Alliance Variant
Chr11:55042186 Gm31688 within coordinates of
Slc36a3 mRNA-UTR
Tssr108046 319 bp downstream
SNP A/G A A A A A A G A A A A A A A A
rs227717189
MGI SNP Detail
Alliance Variant
Chr11:55042201 Gm31688 within coordinates of
Slc36a3 mRNA-UTR
Tssr108046 304 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs26945170
MGI SNP Detail
Alliance Variant
Chr11:55042236 Gm31688 within coordinates of
Slc36a3 mRNA-UTR
Tssr108046 269 bp downstream
SNP G/T T T T T T T G T T G G T G G T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264958709
MGI SNP Detail
Alliance Variant
Chr11:55042484 Gm31688 within coordinates of
Slc36a3 mRNA-UTR
Tssr108046 21 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225604504
MGI SNP Detail
Chr11:55042605 Gm31688 within coordinates of
Tssr108046 88 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs244768085
MGI SNP Detail
Chr11:55042666 Gm31688 within coordinates of
Tssr108046 149 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs26945169
MGI SNP Detail
Chr11:55042673 Gm31688 within coordinates of
Tssr108046 156 bp upstream
SNP A/G A A A A A A G A A G A G A
rs233704681
MGI SNP Detail
Chr11:55042695 Gm31688 within coordinates of
Tssr108046 178 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs259345407
MGI SNP Detail
Chr11:55042696 Gm31688 within coordinates of
Tssr108046 179 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs26945168
MGI SNP Detail
Chr11:55042716 Gm31688 within coordinates of
Tssr108046 199 bp upstream
SNP C/T T T T T T T T T C C T
rs236342028
MGI SNP Detail
Chr11:55042752 Gm31688 within coordinates of
Tssr108046 235 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256255728
MGI SNP Detail
Chr11:55042756 Gm31688 within coordinates of
Tssr108046 239 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219507813
MGI SNP Detail
Chr11:55042771 Gm31688 within coordinates of
Tssr108046 254 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs232653653
MGI SNP Detail
Chr11:55042804 Gm31688 within coordinates of
Tssr108046 287 bp upstream
SNP C/T C C C C C T C C C C C C T T C C C C T C C C T C C C C T C C C C C T C C T T T C T C C C C C C C C C C C C
rs583023215
MGI SNP Detail
Chr11:55042958 Gm31688 within coordinates of
Tssr108046 441 bp upstream
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs585281018
MGI SNP Detail
Chr11:55042966 Gm31688 within coordinates of
Tssr108046 449 bp upstream
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs252654525
MGI SNP Detail
Chr11:55042970 Gm31688 within coordinates of
Tssr108046 453 bp upstream
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs221666916
MGI SNP Detail
Chr11:55043001 Gm31688 within coordinates of
Tssr108046 484 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs247187680
MGI SNP Detail
Chr11:55043011 Gm31688 within coordinates of
Tssr108046 494 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs266075997
MGI SNP Detail
Chr11:55043034 Gm31688 within coordinates of
Tssr108046 517 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220036200
MGI SNP Detail
Chr11:55043189 Gm31688 within coordinates of
Tssr108046 672 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs244569591
MGI SNP Detail
Chr11:55043312 Gm31688 within coordinates of
Tssr108046 795 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs579817608
MGI SNP Detail
Chr11:55043346 Gm31688 within coordinates of
Tssr108046 829 bp upstream
SNP A/T T T T T T A T T T T T T A A T T T T A T T T T T T T T A T T T T T A T T A A A T T T T T T T T T T T T T T
rs583494874
MGI SNP Detail
Chr11:55043347 Gm31688 within coordinates of
Tssr108046 830 bp upstream
SNP A/T T T T T T A T T T T T T A A T T T T A T T T A T T T T A A A T T T A T T A A A T A T T T T T T T T T T T T
rs587221659
MGI SNP Detail
Chr11:55043348 Gm31688 within coordinates of
Tssr108046 831 bp upstream
SNP A/T T T T T T A T T T T T T A A T T T T A T T T A T T T T A A A T T T A T T A A A T A T T T T T T T T T T T T
rs254978052
MGI SNP Detail
Chr11:55043401 Gm31688 within coordinates of
Tssr108046 884 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225669375
MGI SNP Detail
Chr11:55043409 Gm31688 within coordinates of
Tssr108046 892 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs244820892
MGI SNP Detail
Chr11:55043668 Gm31688 within coordinates of
Tssr108046 1151 bp upstream
SNP C/G C C C C C G C C C C C C G G C C C C G G C C G C C C C G G G C C C G C C G G G C G C C C C C C C G C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs257571616
MGI SNP Detail
Chr11:55043842 Gm31688 within coordinates of
Tssr108046 1325 bp upstream
SNP A/T A A A A A T A A A A A A T T A A A A T T A A T A A A A T T T A A A T A A T T T A T A A A A A A A T A A A A
rs227810696
MGI SNP Detail
Chr11:55043874 Gm31688 within coordinates of
Tssr108046 1357 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254137189
MGI SNP Detail
Chr11:55043892 Gm31688 within coordinates of
Tssr108046 1375 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs219249913
MGI SNP Detail
Chr11:55043938 Gm31688 within coordinates of
Tssr108046 1421 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A
rs227740619
MGI SNP Detail
Chr11:55043968 Gm31688 within coordinates of
Tssr108046 1451 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs254250559
MGI SNP Detail
Chr11:55044044 Gm31688 within coordinates of
Tssr108046 1527 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213642645
MGI SNP Detail
Chr11:55044048 Gm31688 within coordinates of
Tssr108046 1531 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A G A A A A
rs232835125
MGI SNP Detail
Chr11:55044130 Gm31688 within coordinates of
Tssr108046 1613 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs252784777
MGI SNP Detail
Chr11:55044139 Gm31688 within coordinates of
Tssr108046 1622 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs215831751
MGI SNP Detail
Chr11:55044173 Gm31688 within coordinates of
Tssr108046 1656 bp upstream
SNP A/G G G G G G A G G G G G G A A G G G G A G G G A G G G G A G G G G G A G G A A A G A G G G G G G G G G G G G
rs241929515
MGI SNP Detail
Chr11:55044197 Gm31688 within coordinates of
Tssr108046 1680 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260716982
MGI SNP Detail
Chr11:55044267 Gm31688 within coordinates of
Tssr108046 1750 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs219776905
MGI SNP Detail
Chr11:55044381 Gm31688 within coordinates of
Tssr108046 1864 bp upstream
SNP A/C C C C C C A C C C C C C A A C C C C A C C C C C C C C A C C C C C A C C A A A C C C C C C C C C C C C C C
rs241828169
MGI SNP Detail
Chr11:55044394 Gm31688 within coordinates of
Tssr108046 1877 bp upstream
SNP A/G G G G G G A G G G G G A G G G G A G G G G G G G G A G G G G G A G G A A G G G G G G G G G G G G G G
rs249351422
MGI SNP Detail
Chr11:55044398 Gm31688 within coordinates of
Tssr108046 1881 bp upstream
SNP G/T T T T T T G T T T T T G G T T T T G G T T G T T T T G G G T T T G T T G G T G T T T T T T T G T T T G
rs219766167
MGI SNP Detail
Chr11:55044399 Gm31688 within coordinates of
Tssr108046 1882 bp upstream
SNP C/T C C C C C T C C C C C T T C C C C T C C C C C C C C C C C C T C C T T C T C C C C C C C C C C C C
rs238797139
MGI SNP Detail
Chr11:55044400 Gm31688 within coordinates of
Tssr108046 1883 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs581399004
MGI SNP Detail
Chr11:55044492 Gm31688 within coordinates of
Tssr108046 1975 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257643034
MGI SNP Detail
Chr11:55044498 Gm31688 within coordinates of
Tssr108046 1981 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
<< first < prev1 next > last >>
Showing SNP(s) 1 - 94 of 94

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/25/2025
MGI 6.24
The Jackson Laboratory