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Mouse SNP Summary
Symbol
Name
ID 		Tssr108127
transcription start site region 108127
MGI:6035894

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Showing SNP(s) 1 - 59 of 59

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/Sv
129X1/SvJ
A
A/He
A/J
AKR
AKR/J
B10.D2-H2<d>
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cBy
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/He
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MRL/Mp
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs26980910
MGI SNP Detail		 Chr11:57718155 Rr447811 within coordinates of
Tssr108127 1979 bp downstream
 SNP C/T C C T T C C C C C C C T T
rs220731520
MGI SNP Detail		 Chr11:57718210 Rr447811 within coordinates of
Tssr108127 1924 bp downstream
 SNP G/T T T T T G T G G G T T T T T T G G T T T G T T T T T T T G T G T T T G T T G T G T T G T G T T T T T G G
rs26980909
MGI SNP Detail		 Chr11:57718247 Rr447811 within coordinates of
Tssr108127 1887 bp downstream
 SNP A/G G G A A A G G G G G G G A A A
rs261910085
MGI SNP Detail		 Chr11:57718282 Rr447811 within coordinates of
Tssr108127 1852 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs221185453
MGI SNP Detail		 Chr11:57718346 Rr447811 within coordinates of
Tssr108127 1788 bp downstream
 SNP G/T T T T T G T G G G T T T T T T T G G T T T G G T T T T T T G T G T G T G T T G T G T T G T G T T G T T G G
rs244398367
MGI SNP Detail		 Chr11:57718354 Rr447811 within coordinates of
Tssr108127 1780 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs264571837
MGI SNP Detail		 Chr11:57718641 Cpgi2910 within coordinates of
Tssr108127 1493 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222161462
MGI SNP Detail		 Chr11:57718652 Cpgi2910 within coordinates of
Tssr108127 1482 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240422389
MGI SNP Detail		 Chr11:57718658 Cpgi2910 within coordinates of
Tssr108127 1476 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257599760
MGI SNP Detail		 Chr11:57718745 Cpgi2910 within coordinates of
Tssr108127 1389 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs26980908
MGI SNP Detail		 Chr11:57718814 Cpgi2910 within coordinates of
Rr447812 within coordinates of
Tssr108127 1320 bp downstream
 SNP C/G C C C C C C G G C C G C C C C C C
rs243890536
MGI SNP Detail		 Chr11:57718822 Cpgi2910 within coordinates of
Rr447812 within coordinates of
Tssr108127 1312 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C T T
rs264914978
MGI SNP Detail		 Chr11:57718848 Cpgi2910 within coordinates of
Rr447812 within coordinates of
Tssr108127 1286 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs26980907
MGI SNP Detail		 Chr11:57718899 Cpgi2910 within coordinates of
Rr447812 within coordinates of
Tssr108127 1235 bp downstream
 SNP A/C A A A A A A A A A A A C C A A A A
rs45995858
MGI SNP Detail		 Chr11:57718920 Cpgi2910 within coordinates of
Rr447812 within coordinates of
Tssr108127 1214 bp downstream
 SNP C/T T T T C
rs260354624
MGI SNP Detail		 Chr11:57718940 Cpgi2910 within coordinates of
Rr447812 within coordinates of
Tssr108127 1194 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219025723
MGI SNP Detail		 Chr11:57718996 Cpgi2910 within coordinates of
Rr447812 within coordinates of
Tssr108127 1138 bp downstream
 SNP A/T A A A A T A T T T A A A A A A A T T A A A T A A A A A A A A T A A A T A A T A T A A T A T A A A A A T T
rs26980906
MGI SNP Detail		 Chr11:57718997 Cpgi2910 within coordinates of
Rr447812 within coordinates of
Tssr108127 1137 bp downstream
 SNP C/T C C C C T T C C C C C C C C
rs29410967
MGI SNP Detail		 Chr11:57719012 Cpgi2910 within coordinates of
Rr447812 within coordinates of
Tssr108127 1122 bp downstream
 SNP A/T T T A T T A T
rs215148525
MGI SNP Detail		 Chr11:57719017 Cpgi2910 within coordinates of
Rr447812 within coordinates of
Tssr108127 1117 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs232449706
MGI SNP Detail		 Chr11:57719021 Cpgi2910 within coordinates of
Rr447812 within coordinates of
Tssr108127 1113 bp downstream
 SNP C/T C C C C C C C C T C C C C C C C C C C C C T C C C C C C C C C T C C C T C C T C C C C C C C C C C C C C C
rs256745309
MGI SNP Detail		 Chr11:57719047 Cpgi2910 within coordinates of
Rr447812 within coordinates of
Tssr108127 1087 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220641752
MGI SNP Detail		 Chr11:57719068 Cpgi2910 within coordinates of
Rr447812 within coordinates of
Tssr108127 1066 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs234465772
MGI SNP Detail		 Chr11:57719101 Cpgi2910 within coordinates of
Rr447812 within coordinates of
Tssr108127 1033 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264067713
MGI SNP Detail		 Chr11:57719245 Rr447812 within coordinates of
Tssr108127 889 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/Sv
129X1/SvJ
A
A/He
A/J
AKR
AKR/J
B10.D2-H2<d>
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cBy
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/He
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MRL/Mp
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs50743866
MGI SNP Detail		 Chr11:57719298 Rr447812 within coordinates of
Tssr108127 836 bp downstream
 SNP G G G G G G
rs52029326
MGI SNP Detail		 Chr11:57719327 Rr447812 within coordinates of
Tssr108127 807 bp downstream
 SNP G G G G G G
rs257686871
MGI SNP Detail		 Chr11:57719405 Tssr108127 729 bp downstream
 SNP A/G G G G G A G A A A G G G G G G G A A G G G A G G G G G G G G A G G G A G G A G G G G A G A G G G G G G G
rs51333304
MGI SNP Detail		 Chr11:57719440 Tssr108127 694 bp downstream
 SNP T T T T T T
rs52498636
MGI SNP Detail		 Chr11:57719750 Hand1 within coordinates of
Tssr108127 384 bp downstream
 SNP A A A A A A
rs52376688
MGI SNP Detail		 Chr11:57719806 Hand1 within coordinates of
Rr447813 within coordinates of
Tssr108127 328 bp downstream
 SNP A/C A A C A
rs228230001
MGI SNP Detail		 Chr11:57720127 Cpgi2911 within coordinates of
Hand1 within coordinates of
Rr447813 within coordinates of
Tssr108127 7 bp downstream
 SNP C/T C C C C T C T T T C C C C C C C T T C C C T C C C C C C T C T C C C T C C T C T C C T C T C C C C C T T
rs3023263
MGI SNP Detail		 Chr11:57720153 Cpgi2911 within coordinates of
Hand1 within coordinates of
Rr447813 within coordinates of
Tssr108127 14 bp upstream
 SNP A/G G G G G G G A A A A A A G G A A A G G G G A G G A A A G A
rs3090972
MGI SNP Detail		 Chr11:57720204 Cpgi2911 within coordinates of
Hand1 within coordinates of
Rr447813 within coordinates of
Tssr108127 65 bp upstream
 SNP A/T A A A A A A A T A A A A A
rs26980905
MGI SNP Detail		 Chr11:57720315 Cpgi2911 within coordinates of
Hand1 within coordinates of
Rr447814 within coordinates of
Tssr108127 176 bp upstream
 SNP C/T T T T T T T T C C T T T T T T T T T T
rs26980904
MGI SNP Detail		 Chr11:57720371 Cpgi2911 within coordinates of
Hand1 within coordinates of
Rr447814 within coordinates of
Tssr108127 232 bp upstream
 SNP A/G G G G G G G A A G G G G G G G G
rs215186192
MGI SNP Detail		 Chr11:57720493 Cpgi2911 within coordinates of
Hand1 within coordinates of
Rr447814 within coordinates of
Tssr108127 354 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs26980903
MGI SNP Detail		 Chr11:57720497 Cpgi2911 within coordinates of
Hand1 within coordinates of
Rr447814 within coordinates of
Tssr108127 358 bp upstream
 SNP C/G C C C C C C C C C G C C C C
rs226557430
MGI SNP Detail		 Chr11:57720599 Hand1 within coordinates of
Rr447814 within coordinates of
Tssr108127 460 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs26980902
MGI SNP Detail		 Chr11:57720769 Hand1 within coordinates of
Rr447814 within coordinates of
Tssr108127 630 bp upstream
 SNP A/G G G G A A G A A G G G A A A A A G A
rs212510508
MGI SNP Detail		 Chr11:57720887 Hand1 within coordinates of
Rr447814 within coordinates of
Tssr108127 748 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs26980901
MGI SNP Detail		 Chr11:57721025 Hand1 within coordinates of
Rr447814 within coordinates of
Tssr108127 886 bp upstream
 SNP G/T G G G G G T T G G T T T G G
rs29433438
MGI SNP Detail		 Chr11:57721225 Hand1 within coordinates of
Rr447814 within coordinates of
Tssr108127 1086 bp upstream
 SNP A/G A A G A G A
rs26980900
MGI SNP Detail		 Chr11:57721264 Hand1 within coordinates of
Rr447814 within coordinates of
Tssr108127 1125 bp upstream
 SNP C/T C C C T C T T C C C C T C
rs233843585
MGI SNP Detail		 Chr11:57721268 Hand1 within coordinates of
Rr447814 within coordinates of
Tssr108127 1129 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29423627
MGI SNP Detail		 Chr11:57721305 Hand1 within coordinates of
Rr447814 within coordinates of
Tssr108127 1166 bp upstream
 SNP A/G A A G A G A
rs29460725
MGI SNP Detail		 Chr11:57721312 Hand1 within coordinates of
Rr447814 within coordinates of
Tssr108127 1173 bp upstream
 SNP A/G G G A G A G
rs243631788
MGI SNP Detail		 Chr11:57721313 Hand1 within coordinates of
Rr447814 within coordinates of
Tssr108127 1174 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29436735
MGI SNP Detail		 Chr11:57721527 Hand1 within coordinates of
Rr447814 within coordinates of
Tssr108127 1388 bp upstream
 SNP A/T T T A T T T
rs220512785
MGI SNP Detail		 Chr11:57721594 Hand1 within coordinates of
Tssr108127 1455 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/Sv
129X1/SvJ
A
A/He
A/J
AKR
AKR/J
B10.D2-H2<d>
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cBy
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/He
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MRL/Mp
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251419747
MGI SNP Detail		 Chr11:57721616 Hand1 within coordinates of
Tssr108127 1477 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260803350
MGI SNP Detail		 Chr11:57721626 Hand1 within coordinates of
Tssr108127 1487 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs29407344
MGI SNP Detail		 Chr11:57721627 Hand1 within coordinates of
Tssr108127 1488 bp upstream
 SNP A/T T T A T T T
rs240665209
MGI SNP Detail		 Chr11:57721713 Hand1 within coordinates of
Tssr108127 1574 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29391897
MGI SNP Detail		 Chr11:57721751 Hand1 within coordinates of
Tssr108127 1612 bp upstream
 SNP A/T A T A A A
rs230985514
MGI SNP Detail		 Chr11:57721778 Hand1 within coordinates of
Tssr108127 1639 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29439522
MGI SNP Detail		 Chr11:57721878 Hand1 within coordinates of
Tssr108127 1739 bp upstream
 SNP A/C A C A A A
rs29463738
MGI SNP Detail		 Chr11:57722014 Hand1 within coordinates of
Tssr108127 1875 bp upstream
 SNP C/T C T C C
rs13481044
MGI SNP Detail		 Chr11:57722100 Cpgi2912 within coordinates of
Hand1 within coordinates of
Tssr108127 1961 bp upstream
 SNP A/G G G G G G G G G A A A G G A A G G G G G G G G A G G G G G G G G G A G G G G G G G G G G G G G G
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Showing SNP(s) 1 - 59 of 59
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory