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Mouse SNP Summary
Symbol
Name
ID 		Tssr108667
transcription start site region 108667
MGI:6036434

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Showing SNP(s) 1 - 48 of 48

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29396068
MGI SNP Detail		 Chr11:69298338 Kdm6b within coordinates of
Tssr108667 1880 bp downstream
 SNP A/G A A A A G A G
rs29482435
MGI SNP Detail		 Chr11:69298344 Kdm6b within coordinates of
Tssr108667 1874 bp downstream
 SNP A/G G G G G A G A
rs248707729
MGI SNP Detail		 Chr11:69298416 Kdm6b within coordinates of
Tssr108667 1802 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29458579
MGI SNP Detail		 Chr11:69298466 Kdm6b within coordinates of
Tssr108663 within coordinates of
Tssr108667 1752 bp downstream
 SNP A/G G G G A G A
rs234767617
MGI SNP Detail		 Chr11:69298482 Kdm6b within coordinates of
Tssr108667 1736 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244954168
MGI SNP Detail		 Chr11:69298617 Kdm6b within coordinates of
Tssr108667 1601 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29433054
MGI SNP Detail		 Chr11:69298638 Kdm6b within coordinates of
Tssr108667 1580 bp downstream
 SNP G/T T T T G T G
rs29474870
MGI SNP Detail		 Chr11:69298702 Kdm6b within coordinates of
Tssr108667 1516 bp downstream
 SNP G/T G T G T G
rs261276035
MGI SNP Detail		 Chr11:69298749 Kdm6b within coordinates of
Tssr108667 1469 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29452572
MGI SNP Detail		 Chr11:69298860 Kdm6b within coordinates of
Rr247028 within coordinates of
Tssr108667 1358 bp downstream
 SNP A/G A G A G A
rs29474498
MGI SNP Detail		 Chr11:69298896 Kdm6b within coordinates of
Rr247028 within coordinates of
Tssr108667 1322 bp downstream
 SNP A/G G G A G A
rs29423510
MGI SNP Detail		 Chr11:69299042 Kdm6b within coordinates of
Rr247028 within coordinates of
Tssr108667 1176 bp downstream
 SNP A/C A A C C
rs29485316
MGI SNP Detail		 Chr11:69299043 Kdm6b within coordinates of
Rr247028 within coordinates of
Tssr108667 1175 bp downstream
 SNP A/G G G A A
rs29426534
MGI SNP Detail		 Chr11:69299250 Kdm6b within coordinates of
Rr247028 within coordinates of
Tssr108667 968 bp downstream
 SNP C/T T T T T C T C
rs262540382
MGI SNP Detail		 Chr11:69299271 Kdm6b within coordinates of
Rr247028 within coordinates of
Tssr108667 947 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs223230645
MGI SNP Detail		 Chr11:69299287 Kdm6b within coordinates of
Rr247028 within coordinates of
Tssr108667 931 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241332286
MGI SNP Detail		 Chr11:69299324 Kdm6b within coordinates of
Rr247028 within coordinates of
Tssr108667 894 bp downstream
 SNP A/G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G A G G G A G G G G G G A G
rs264879958
MGI SNP Detail		 Chr11:69299386 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Tssr108665 within coordinates of
Tssr108667 832 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs233311027
MGI SNP Detail		 Chr11:69299392 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Tssr108667 826 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs29443220
MGI SNP Detail		 Chr11:69299401 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Tssr108667 817 bp downstream
 SNP A/G G G G G A G A
rs258992408
MGI SNP Detail		 Chr11:69299436 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Rr402670 within coordinates of
Tssr108667 782 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs580327855
MGI SNP Detail		 Chr11:69299509 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Rr402670 within coordinates of
Tssr108667 709 bp downstream
Tssr3543 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs227956741
MGI SNP Detail		 Chr11:69299639 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Rr402670 within coordinates of
Tssr108667 579 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244989972
MGI SNP Detail		 Chr11:69299646 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Rr402670 within coordinates of
Tssr108667 572 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs233745511
MGI SNP Detail		 Chr11:69299794 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Tssr108667 424 bp downstream
 SNP A/G G A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236195401
MGI SNP Detail		 Chr11:69299813 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Tssr108667 405 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249593802
MGI SNP Detail		 Chr11:69299974 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Tssr108666 within coordinates of
Tssr108667 244 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217682113
MGI SNP Detail		 Chr11:69300013 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Tssr108667 205 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs234969709
MGI SNP Detail		 Chr11:69300076 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Tssr108667 142 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29419721
MGI SNP Detail		 Chr11:69300187 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Rr402671 within coordinates of
Tssr108667 31 bp downstream
 SNP C/T T T C T C
rs221007031
MGI SNP Detail		 Chr11:69300200 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Rr402671 within coordinates of
Tssr108667 18 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233782299
MGI SNP Detail		 Chr11:69300213 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Rr402671 within coordinates of
Tssr108667 5 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs262151157
MGI SNP Detail		 Chr11:69300233 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Rr402671 within coordinates of
Tssr108667 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223856516
MGI SNP Detail		 Chr11:69300476 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Rr402671 within coordinates of
Tssr108667 239 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29435513
MGI SNP Detail		 Chr11:69300547 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Tssr108667 310 bp upstream
 SNP A/G G G A G A
rs261990229
MGI SNP Detail		 Chr11:69300564 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Tssr102460 within coordinates of
Tssr108667 327 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222720629
MGI SNP Detail		 Chr11:69300729 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Rr369256 within coordinates of
Tssr108667 492 bp upstream
Tssr108671 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs26922755
MGI SNP Detail		 Chr11:69300731 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Rr369256 within coordinates of
Tssr108667 494 bp upstream
Tssr108671 within coordinates of
 SNP A/G A A G G G G G
rs259257548
MGI SNP Detail		 Chr11:69300823 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Tssr108667 586 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228187750
MGI SNP Detail		 Chr11:69300918 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Tssr108667 681 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250631928
MGI SNP Detail		 Chr11:69300955 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Tssr108667 718 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs265246796
MGI SNP Detail		 Chr11:69301195 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Tssr108667 958 bp upstream
Tssr108672 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227640892
MGI SNP Detail		 Chr11:69301197 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Tssr108667 960 bp upstream
Tssr108672 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29446323
MGI SNP Detail		 Chr11:69301199 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Tssr108667 962 bp upstream
Tssr108672 within coordinates of
 SNP A/G A A G A G
rs217567269
MGI SNP Detail		 Chr11:69301230 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Tssr108667 993 bp upstream
Tssr108673 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs29478839
MGI SNP Detail		 Chr11:69301731 Cpgi3128 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Tssr108667 1494 bp upstream
 SNP A/G G G G A G A
rs245073443
MGI SNP Detail		 Chr11:69302185 Cpgi3128 within coordinates of
Gm72923 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Tssr102468 within coordinates of
Tssr108667 1948 bp upstream
 SNP A/C C C A A A A A C C A A A A A A A A A A A A A C C A C A C C C C A C A A A A A C A A A C A A C
rs215750533
MGI SNP Detail		 Chr11:69302215 Cpgi3128 within coordinates of
Gm72923 within coordinates of
Kdm6b within coordinates of
Rr247028 within coordinates of
Tssr108667 1978 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
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Showing SNP(s) 1 - 48 of 48
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory