About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Tssr109134
transcription start site region 109134
MGI:6036901

<< first < prev1 next > last >>
Showing SNP(s) 1 - 73 of 73

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs217044848
MGI SNP Detail		 Chr11:74594472 Pafah1b1 within coordinates of
Tssr109134 1971 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229299443
MGI SNP Detail		 Chr11:74594560 Pafah1b1 within coordinates of
Tssr109134 1883 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252188202
MGI SNP Detail		 Chr11:74594570 Pafah1b1 within coordinates of
Tssr109134 1873 bp downstream
 SNP A/G A G
rs253286735
MGI SNP Detail		 Chr11:74594799 Pafah1b1 within coordinates of
Tssr109134 1644 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs214857156
MGI SNP Detail		 Chr11:74594866 Pafah1b1 within coordinates of
Tssr109134 1577 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs238126501
MGI SNP Detail		 Chr11:74594914 Pafah1b1 within coordinates of
Tssr109134 1529 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253790903
MGI SNP Detail		 Chr11:74594931 Pafah1b1 within coordinates of
Tssr109134 1512 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T A T T T T T T A T T T T T T T T T T T T
rs29406907
MGI SNP Detail		 Chr11:74594973 Pafah1b1 within coordinates of
Tssr109134 1470 bp downstream
 SNP A/T A A T T A
rs29394188
MGI SNP Detail		 Chr11:74594974 Pafah1b1 within coordinates of
Tssr109134 1469 bp downstream
 SNP A/T A A T T A
rs29410624
MGI SNP Detail		 Chr11:74594975 Pafah1b1 within coordinates of
Tssr109134 1468 bp downstream
 SNP A/T A A T T A
rs585737061
MGI SNP Detail		 Chr11:74594976 Pafah1b1 within coordinates of
Tssr109134 1467 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs26904644
MGI SNP Detail		 Chr11:74595053 Pafah1b1 within coordinates of
Tssr109134 1390 bp downstream
 SNP A/G G G G G A A G G
rs26904643
MGI SNP Detail		 Chr11:74595058 Pafah1b1 within coordinates of
Tssr109134 1385 bp downstream
 SNP A/G A A G A A A G A G A G A A G A A A
rs242165656
MGI SNP Detail		 Chr11:74595065 Pafah1b1 within coordinates of
Tssr109134 1378 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260838292
MGI SNP Detail		 Chr11:74595066 Pafah1b1 within coordinates of
Tssr109134 1377 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs26904642
MGI SNP Detail		 Chr11:74595069 Pafah1b1 within coordinates of
Tssr109134 1374 bp downstream
 SNP C/T T T T T T T T T C T T C T
rs223042991
MGI SNP Detail		 Chr11:74595079 Pafah1b1 within coordinates of
Tssr109134 1364 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs245562565
MGI SNP Detail		 Chr11:74595163 Pafah1b1 within coordinates of
Tssr109134 1280 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs3023308
MGI SNP Detail		 Chr11:74595273 Pafah1b1 within coordinates of
Tssr109134 1170 bp downstream
 SNP C/T C T T C T C
rs226620197
MGI SNP Detail		 Chr11:74595284 Pafah1b1 within coordinates of
Tssr109134 1159 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs3023307
MGI SNP Detail		 Chr11:74595302 Pafah1b1 within coordinates of
Tssr109134 1141 bp downstream
 SNP C/T T C C T C T
rs259335833
MGI SNP Detail		 Chr11:74595313 Pafah1b1 within coordinates of
Tssr109134 1130 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs229529324
MGI SNP Detail		 Chr11:74595328 Pafah1b1 within coordinates of
Tssr109134 1115 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249483591
MGI SNP Detail		 Chr11:74595353 Pafah1b1 within coordinates of
Tssr109134 1090 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs587123772
MGI SNP Detail		 Chr11:74595406 Pafah1b1 within coordinates of
Tssr109134 1037 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs581774334
MGI SNP Detail		 Chr11:74595410 Pafah1b1 within coordinates of
Tssr109134 1033 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs583822307
MGI SNP Detail		 Chr11:74595501 Pafah1b1 within coordinates of
Tssr109134 942 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T C T T T T T T T T T T T T
rs3023305
MGI SNP Detail		 Chr11:74595527 Pafah1b1 within coordinates of
Tssr109134 916 bp downstream
 SNP A/G G A G G G
rs3021894
MGI SNP Detail		 Chr11:74595669 Pafah1b1 within coordinates of
Tssr109134 774 bp downstream
 SNP A/C/G/T C G A C T G A G
rs247297165
MGI SNP Detail		 Chr11:74595741 Pafah1b1 within coordinates of
Tssr109134 702 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs26904641
MGI SNP Detail		 Chr11:74595762 Pafah1b1 within coordinates of
Tssr109134 681 bp downstream
 SNP C/T T T T T T T T T T T T C T
rs236569370
MGI SNP Detail		 Chr11:74595892 Pafah1b1 within coordinates of
Tssr109134 551 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs29415899
MGI SNP Detail		 Chr11:74595901 Pafah1b1 within coordinates of
Tssr109134 542 bp downstream
 SNP C/T C T C T
rs249416620
MGI SNP Detail		 Chr11:74595911 Pafah1b1 within coordinates of
Tssr109134 532 bp downstream
 SNP A/G A G
rs237072730
MGI SNP Detail		 Chr11:74595933 Pafah1b1 within coordinates of
Tssr109134 510 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs255495496
MGI SNP Detail		 Chr11:74596003 Pafah1b1 within coordinates of
Tssr109134 440 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223093402
MGI SNP Detail		 Chr11:74596104 Pafah1b1 within coordinates of
Tssr109134 339 bp downstream
 SNP A/G G G G A G A G G G G G G A A A A A A G G G A G G G A G G G A A G G G G G A G A G G G A G G G A G A A G G A
rs231165491
MGI SNP Detail		 Chr11:74596123 Pafah1b1 within coordinates of
Tssr109134 320 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257416950
MGI SNP Detail		 Chr11:74596124 Pafah1b1 within coordinates of
Tssr109134 319 bp downstream
 SNP A/G G A
rs226403617
MGI SNP Detail		 Chr11:74596135 Pafah1b1 within coordinates of
Tssr109134 308 bp downstream
 SNP G G G
rs241351833
MGI SNP Detail		 Chr11:74596139 Pafah1b1 within coordinates of
Tssr109134 304 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs584403324
MGI SNP Detail		 Chr11:74596243 Pafah1b1 within coordinates of
Tssr109134 200 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265855708
MGI SNP Detail		 Chr11:74596339 Pafah1b1 within coordinates of
Tssr109134 104 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs222021336
MGI SNP Detail		 Chr11:74596420 Pafah1b1 within coordinates of
Tssr109134 23 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243417268
MGI SNP Detail		 Chr11:74596519 Pafah1b1 within coordinates of
Tssr109134 63 bp upstream
 SNP C/T T C
rs26904640
MGI SNP Detail		 Chr11:74596635 Pafah1b1 within coordinates of
Tssr109134 179 bp upstream
 SNP G/T G G T G G G T
rs230663206
MGI SNP Detail		 Chr11:74596636 Pafah1b1 within coordinates of
Tssr109134 180 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs247564995
MGI SNP Detail		 Chr11:74596644 Pafah1b1 within coordinates of
Tssr109134 188 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs259171529
MGI SNP Detail		 Chr11:74596658 Pafah1b1 within coordinates of
Tssr109134 202 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs26904639
MGI SNP Detail		 Chr11:74596885 Pafah1b1 within coordinates of
Rr386282 within coordinates of
Tssr109134 429 bp upstream
 SNP A/G G G G G G G A G G G A G G A G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs248196547
MGI SNP Detail		 Chr11:74596916 Pafah1b1 within coordinates of
Rr386282 within coordinates of
Tssr109134 460 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs26904638
MGI SNP Detail		 Chr11:74597018 Pafah1b1 within coordinates of
Rr386282 within coordinates of
Tssr109134 562 bp upstream
 SNP C/T T T T T T T C T T T C T T C T
rs235379221
MGI SNP Detail		 Chr11:74597153 Pafah1b1 within coordinates of
Rr386282 within coordinates of
Tssr109134 697 bp upstream
 SNP G/T G T T T T T T T T T T G G T G G T T G T G T T T G T
rs51825966
MGI SNP Detail		 Chr11:74597424 Pafah1b1 within coordinates of
Rr386282 within coordinates of
Tssr109134 968 bp upstream
 SNP C/T C T C T C
rs26904637
MGI SNP Detail		 Chr11:74597491 Pafah1b1 within coordinates of
Rr386282 within coordinates of
Tssr109134 1035 bp upstream
 SNP C/T T C T C T T T
rs50959925
MGI SNP Detail		 Chr11:74597496 Pafah1b1 within coordinates of
Rr386282 within coordinates of
Tssr109134 1040 bp upstream
 SNP C/G G G C G
rs26904636
MGI SNP Detail		 Chr11:74597666 Pafah1b1 within coordinates of
Rr386282 within coordinates of
Tssr109134 1210 bp upstream
 SNP A/G A A G A A A G A G G A A G A A
rs29431507
MGI SNP Detail		 Chr11:74597711 Pafah1b1 within coordinates of
Rr386282 within coordinates of
Tssr109134 1255 bp upstream
 SNP A/T T A A T A T
rs587013178
MGI SNP Detail		 Chr11:74597713 Pafah1b1 within coordinates of
Rr386282 within coordinates of
Tssr109134 1257 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs234822052
MGI SNP Detail		 Chr11:74597725 Pafah1b1 within coordinates of
Rr386282 within coordinates of
Tssr109134 1269 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243573653
MGI SNP Detail		 Chr11:74597744 Pafah1b1 within coordinates of
Rr386282 within coordinates of
Tssr109134 1288 bp upstream
 SNP C/T T C
rs214182771
MGI SNP Detail		 Chr11:74597764 Pafah1b1 within coordinates of
Rr386282 within coordinates of
Tssr109134 1308 bp upstream
 SNP G/T G T
rs260068543
MGI SNP Detail		 Chr11:74597787 Pafah1b1 within coordinates of
Rr386282 within coordinates of
Tssr109134 1331 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs29456632
MGI SNP Detail		 Chr11:74597808 Pafah1b1 within coordinates of
Rr386282 within coordinates of
Tssr109134 1352 bp upstream
 SNP G/T T G G T T T
rs241598037
MGI SNP Detail		 Chr11:74597868 Pafah1b1 within coordinates of
Rr386282 within coordinates of
Tssr109134 1412 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs26904635
MGI SNP Detail		 Chr11:74597870 Pafah1b1 within coordinates of
Rr386282 within coordinates of
Tssr109134 1414 bp upstream
 SNP C/T C C T C C C C T C C T C T C C T C C C
rs26904634
MGI SNP Detail		 Chr11:74597883 Pafah1b1 within coordinates of
Rr386282 within coordinates of
Tssr109134 1427 bp upstream
 SNP C/T T T C T T T T C T C T C T T C T T T
rs29414134
MGI SNP Detail		 Chr11:74597945 Pafah1b1 within coordinates of
Rr386282 within coordinates of
Tssr109134 1489 bp upstream
 SNP A/G A G G A G A
rs259463834
MGI SNP Detail		 Chr11:74597954 Pafah1b1 within coordinates of
Rr386282 within coordinates of
Tssr109134 1498 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580957070
MGI SNP Detail		 Chr11:74598115 D11Mit352 within coordinates of
Pafah1b1 within coordinates of
Rr386282 within coordinates of
Tssr109134 1659 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs260942886
MGI SNP Detail		 Chr11:74598127 D11Mit352 within coordinates of
Pafah1b1 within coordinates of
Rr386282 within coordinates of
Tssr109134 1671 bp upstream
 SNP C/T T C
rs224340424
MGI SNP Detail		 Chr11:74598358 Pafah1b1 within coordinates of
Tssr109134 1902 bp upstream
 SNP C/T T C
rs46439691
MGI SNP Detail		 Chr11:74598429 Pafah1b1 within coordinates of
Tssr109134 1973 bp upstream
 SNP A/G G A G G A
<< first < prev1 next > last >>
Showing SNP(s) 1 - 73 of 73
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory