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Mouse SNP Summary
Symbol
Name
ID 		Tssr111034
transcription start site region 111034
MGI:6038801

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Showing SNP(s) 1 - 48 of 48

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs583308514
MGI SNP Detail		 Chr11:102208221 Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 1947 bp downstream
Ubtf within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs254967174
MGI SNP Detail		 Chr11:102208267 Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 1901 bp downstream
Ubtf within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T C T C T T T T T T T C T T T T
rs216563862
MGI SNP Detail		 Chr11:102208279 Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 1889 bp downstream
Ubtf within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A T A A T A A A A T A A A A T A A A A T A T A A A A A A A T A A A A
rs232136837
MGI SNP Detail		 Chr11:102208309 Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 1859 bp downstream
Ubtf within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C T T T T C T C T T T T T T C T T T
rs244790530
MGI SNP Detail		 Chr11:102208523 Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 1645 bp downstream
Ubtf within coordinates of
 SNP A/G G G G G G G G G G G G G G G G A G G A G G G A G G G G G G G G A G G G G G G G G G G G
rs587269274
MGI SNP Detail		 Chr11:102208856 Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 1312 bp downstream
Ubtf within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs214060884
MGI SNP Detail		 Chr11:102209020 Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 1148 bp downstream
Ubtf within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs229683672
MGI SNP Detail		 Chr11:102209039 Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 1129 bp downstream
Ubtf within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250142216
MGI SNP Detail		 Chr11:102209097 Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 1071 bp downstream
Ubtf within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
rs217968826
MGI SNP Detail		 Chr11:102209109 Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 1059 bp downstream
Ubtf within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T G T G T T T T T T T G T T T
rs243073044
MGI SNP Detail		 Chr11:102209153 Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 1015 bp downstream
Ubtf within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C A C C C C C C C C C C C
rs258486846
MGI SNP Detail		 Chr11:102209298 Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 870 bp downstream
Ubtf within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230129356
MGI SNP Detail		 Chr11:102209421 Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 747 bp downstream
Ubtf within coordinates of
 SNP C/G C G
rs240181448
MGI SNP Detail		 Chr11:102209431 Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 737 bp downstream
Ubtf within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249893436
MGI SNP Detail		 Chr11:102209439 Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 729 bp downstream
Ubtf within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs220218069
MGI SNP Detail		 Chr11:102209544 Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 624 bp downstream
Ubtf within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A G A G A A A A A A G A A A
rs235919813
MGI SNP Detail		 Chr11:102209685 Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 483 bp downstream
Ubtf within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G G G G G C G C G G G G G G G G G G G
rs264892519
MGI SNP Detail		 Chr11:102209722 Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 446 bp downstream
Ubtf within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs233457094
MGI SNP Detail		 Chr11:102210059 Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 109 bp downstream
Ubtf within coordinates of
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs251871416
MGI SNP Detail		 Chr11:102210095 Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 73 bp downstream
Ubtf within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs263291690
MGI SNP Detail		 Chr11:102210455 Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 280 bp upstream
Ubtf within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29425383
MGI SNP Detail		 Chr11:102210596 C030013E06Rik within coordinates of
Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 421 bp upstream
 SNP C/T C T T
rs29439866
MGI SNP Detail		 Chr11:102210598 C030013E06Rik within coordinates of
Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 423 bp upstream
 SNP C/T C T T
rs29414855
MGI SNP Detail		 Chr11:102210600 C030013E06Rik within coordinates of
Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 425 bp upstream
 SNP C/T C T T
rs224062027
MGI SNP Detail		 Chr11:102210644 C030013E06Rik within coordinates of
Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 469 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C T C T C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29457814
MGI SNP Detail		 Chr11:102210686 C030013E06Rik within coordinates of
Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 511 bp upstream
 SNP A/G G A A
rs243966374
MGI SNP Detail		 Chr11:102210767 C030013E06Rik within coordinates of
Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 592 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs217722367
MGI SNP Detail		 Chr11:102210769 C030013E06Rik within coordinates of
Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 594 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G A G A G G G G G G G G G G G G
rs29466283
MGI SNP Detail		 Chr11:102210960 C030013E06Rik within coordinates of
Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 785 bp upstream
 SNP A/G G A G G
rs29388549
MGI SNP Detail		 Chr11:102211048 C030013E06Rik within coordinates of
Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 873 bp upstream
 SNP G/T G T G G
rs581306503
MGI SNP Detail		 Chr11:102211124 C030013E06Rik within coordinates of
Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 949 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs216497712
MGI SNP Detail		 Chr11:102211257 C030013E06Rik within coordinates of
Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 1082 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231298294
MGI SNP Detail		 Chr11:102211296 C030013E06Rik within coordinates of
Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 1121 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs47460709
MGI SNP Detail		 Chr11:102211437 C030013E06Rik within coordinates of
Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 1262 bp upstream
 SNP G/T G G G T
rs27040568
MGI SNP Detail		 Chr11:102211517 C030013E06Rik within coordinates of
Cpgi3917 within coordinates of
Rr245873 within coordinates of
Tssr111034 1342 bp upstream
 SNP C/T T C T T T C C
rs230188046
MGI SNP Detail		 Chr11:102211579 C030013E06Rik within coordinates of
Rr245873 within coordinates of
Tssr111034 1404 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256309138
MGI SNP Detail		 Chr11:102211654 C030013E06Rik within coordinates of
Rr245873 within coordinates of
Tssr111034 1479 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C T C T C C C C C C C T C C C C
rs226273801
MGI SNP Detail		 Chr11:102211759 C030013E06Rik within coordinates of
Rr245873 within coordinates of
Tssr111034 1584 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs248718149
MGI SNP Detail		 Chr11:102211847 C030013E06Rik within coordinates of
Rr245873 within coordinates of
Tssr111034 1672 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A G A G A A A A A A A A A A A A
rs265606887
MGI SNP Detail		 Chr11:102211956 C030013E06Rik within coordinates of
Rr245873 within coordinates of
Tssr111034 1781 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs222255392
MGI SNP Detail		 Chr11:102211991 C030013E06Rik within coordinates of
Rr245873 within coordinates of
Tssr111034 1816 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs239159259
MGI SNP Detail		 Chr11:102212050 C030013E06Rik within coordinates of
Tssr111034 1875 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T C T C T T T T T T T T T T T T
rs258635067
MGI SNP Detail		 Chr11:102212065 C030013E06Rik within coordinates of
Tssr111034 1890 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs223974134
MGI SNP Detail		 Chr11:102212074 C030013E06Rik within coordinates of
Tssr111034 1899 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs253797678
MGI SNP Detail		 Chr11:102212076 C030013E06Rik within coordinates of
Tssr111034 1901 bp upstream
 SNP C/G/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C T C T C C C C C C C G C C C C
rs29390987
MGI SNP Detail		 Chr11:102212112 C030013E06Rik within coordinates of
Tssr111034 1937 bp upstream
 SNP C/T C T C
rs234616445
MGI SNP Detail		 Chr11:102212136 C030013E06Rik within coordinates of
Tssr111034 1961 bp upstream
 SNP A/C/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G A G A G G G G G G G C G G G G
rs251994969
MGI SNP Detail		 Chr11:102212156 C030013E06Rik within coordinates of
Tssr111034 1981 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
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Showing SNP(s) 1 - 48 of 48
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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