About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Tssr112534
transcription start site region 112534
MGI:6040301

<< first < prev1 next > last >>
Showing SNP(s) 1 - 74 of 74

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs218805030
MGI SNP Detail		 Chr12:3954838 Dnmt3a within coordinates of
Tssr112534 1970 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs232851975
MGI SNP Detail		 Chr12:3954878 Dnmt3a within coordinates of
Tssr112534 1930 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs246934619
MGI SNP Detail		 Chr12:3954950 Dnmt3a within coordinates of
Tssr112534 1858 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs214832147
MGI SNP Detail		 Chr12:3955062 Dnmt3a within coordinates of
Tssr112534 1746 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs232808893
MGI SNP Detail		 Chr12:3955067 Dnmt3a within coordinates of
Tssr112534 1741 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251157286
MGI SNP Detail		 Chr12:3955080 Dnmt3a within coordinates of
Tssr112534 1728 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs46537294
MGI SNP Detail		 Chr12:3955099 Dnmt3a within coordinates of
Tssr112534 1709 bp upstream
 SNP C/T C C C C C C C C C C T C C T C
rs585225608
MGI SNP Detail		 Chr12:3955196 Dnmt3a within coordinates of
Tssr112534 1612 bp upstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs579314127
MGI SNP Detail		 Chr12:3955197 Dnmt3a within coordinates of
Tssr112534 1611 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs582689134
MGI SNP Detail		 Chr12:3955234 Dnmt3a within coordinates of
Tssr112534 1574 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T C T T T T T T T T T T T T
rs584629937
MGI SNP Detail		 Chr12:3955241 Dnmt3a within coordinates of
Tssr112534 1567 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs578863446
MGI SNP Detail		 Chr12:3955285 Dnmt3a within coordinates of
Tssr112534 1523 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29193568
MGI SNP Detail		 Chr12:3955303 Dnmt3a within coordinates of
Tssr112534 1505 bp upstream
 SNP C/T C T T T
rs261047194
MGI SNP Detail		 Chr12:3955493 Dnmt3a within coordinates of
Tssr112534 1315 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs579661803
MGI SNP Detail		 Chr12:3955518 Dnmt3a within coordinates of
Tssr112534 1290 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs581714755
MGI SNP Detail		 Chr12:3955539 Dnmt3a within coordinates of
Tssr112534 1269 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs46449548
MGI SNP Detail		 Chr12:3955682 Dnmt3a within coordinates of
Tssr112534 1126 bp upstream
 SNP A/G A A A A A A G A A A G A A G A
rs240177742
MGI SNP Detail		 Chr12:3955686 Dnmt3a within coordinates of
Tssr112534 1122 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251312909
MGI SNP Detail		 Chr12:3955718 Dnmt3a within coordinates of
Tssr112534 1090 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G C G G G G
rs220058553
MGI SNP Detail		 Chr12:3955724 Dnmt3a within coordinates of
Tssr112534 1084 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T C T T T T
rs585342848
MGI SNP Detail		 Chr12:3955730 Dnmt3a within coordinates of
Tssr112534 1078 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G
rs580420231
MGI SNP Detail		 Chr12:3955732 Dnmt3a within coordinates of
Tssr112534 1076 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs237962826
MGI SNP Detail		 Chr12:3955750 Dnmt3a within coordinates of
Tssr112534 1058 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C G C C C C
rs264958820
MGI SNP Detail		 Chr12:3955771 Dnmt3a within coordinates of
Tssr112534 1037 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228057493
MGI SNP Detail		 Chr12:3955792 Dnmt3a within coordinates of
Tssr112534 1016 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs47335025
MGI SNP Detail		 Chr12:3955835 Dnmt3a within coordinates of
Tssr112534 973 bp upstream
 SNP C/T C C C C C C T C C C T C C T C
rs51180246
MGI SNP Detail		 Chr12:3955852 Dnmt3a within coordinates of
Tssr112534 956 bp upstream
 SNP A/G G G G G G G A G G G G G G
rs29219538
MGI SNP Detail		 Chr12:3955857 Dnmt3a within coordinates of
Tssr112534 951 bp upstream
 SNP G/T G G G G G G G G G T G G G G G G G
rs247029055
MGI SNP Detail		 Chr12:3955876 Dnmt3a within coordinates of
Tssr112534 932 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs214863818
MGI SNP Detail		 Chr12:3955990 Dnmt3a within coordinates of
Tssr112534 818 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226244233
MGI SNP Detail		 Chr12:3955991 Dnmt3a within coordinates of
Tssr112534 817 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs245010832
MGI SNP Detail		 Chr12:3955998 Dnmt3a within coordinates of
Tssr112534 810 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213202861
MGI SNP Detail		 Chr12:3956026 Dnmt3a within coordinates of
Tssr112534 782 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234575257
MGI SNP Detail		 Chr12:3956027 Dnmt3a within coordinates of
Tssr112534 781 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs264157709
MGI SNP Detail		 Chr12:3956034 Dnmt3a within coordinates of
Tssr112534 774 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs217775041
MGI SNP Detail		 Chr12:3956074 Dnmt3a within coordinates of
Tssr112534 734 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs233738865
MGI SNP Detail		 Chr12:3956178 Dnmt3a within coordinates of
Tssr112534 630 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs251355051
MGI SNP Detail		 Chr12:3956179 Dnmt3a within coordinates of
Tssr112534 629 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs51706717
MGI SNP Detail		 Chr12:3956220 Dnmt3a within coordinates of
Tssr112534 588 bp upstream
 SNP A/G A A A A A A G A A A G A A G A
rs231478309
MGI SNP Detail		 Chr12:3956253 Dnmt3a within coordinates of
Tssr112534 555 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs256701492
MGI SNP Detail		 Chr12:3956435 Dnmt3a within coordinates of
Tssr112534 373 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220523707
MGI SNP Detail		 Chr12:3956511 Dnmt3a within coordinates of
Tssr112534 297 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs6227118
MGI SNP Detail		 Chr12:3956536 Dnmt3a within coordinates of
Tssr112534 272 bp upstream
 SNP A/C A A A A A A A A C A A A C A A C A
rs266001798
MGI SNP Detail		 Chr12:3956595 Dnmt3a within coordinates of
Tssr112534 213 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs6227608
MGI SNP Detail		 Chr12:3956598 Dnmt3a within coordinates of
Tssr112534 210 bp upstream
 SNP C/T T T T T T T T T C T T T C T T C T
rs49432040
MGI SNP Detail		 Chr12:3956621 Dnmt3a within coordinates of
Tssr112534 187 bp upstream
 SNP A/G G G G G G G A G G G G G G G G
rs6227687
MGI SNP Detail		 Chr12:3956655 Dnmt3a within coordinates of
Tssr112534 153 bp upstream
 SNP A/T A T
rs226289554
MGI SNP Detail		 Chr12:3956671 Dnmt3a within coordinates of
Tssr112534 137 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254805558
MGI SNP Detail		 Chr12:3956703 Dnmt3a within coordinates of
Tssr112534 105 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs47165968
MGI SNP Detail		 Chr12:3956708 Dnmt3a within coordinates of
Tssr112534 100 bp upstream
 SNP G/T G T G T T T T T T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs6228205
MGI SNP Detail		 Chr12:3956740 Dnmt3a within coordinates of
Tssr112534 68 bp upstream
 SNP A/G A G
rs50401550
MGI SNP Detail		 Chr12:3956749 Dnmt3a within coordinates of
Tssr112534 59 bp upstream
 SNP A/C C C C C C C A C C C C C C
rs6228221
MGI SNP Detail		 Chr12:3956753 Dnmt3a within coordinates of
Tssr112534 55 bp upstream
 SNP C/T T C
rs6228240
MGI SNP Detail		 Chr12:3956762 Dnmt3a within coordinates of
Tssr112534 46 bp upstream
 SNP C/T T T T T T T T T C T T T C T T C T
rs214561470
MGI SNP Detail		 Chr12:3956933 Dnmt3a within coordinates of
Tssr112534 112 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231509032
MGI SNP Detail		 Chr12:3956951 Dnmt3a within coordinates of
Tssr112534 130 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs261620277
MGI SNP Detail		 Chr12:3957034 Dnmt3a within coordinates of
Tssr112534 213 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs51221566
MGI SNP Detail		 Chr12:3957051 Dnmt3a within coordinates of
Tssr112534 230 bp downstream
 SNP C/T T T T T T T C T T T T T T T T
rs243513754
MGI SNP Detail		 Chr12:3957079 Dnmt3a within coordinates of
Tssr112534 258 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260552219
MGI SNP Detail		 Chr12:3957169 Dnmt3a within coordinates of
Tssr112534 348 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222172267
MGI SNP Detail		 Chr12:3957182 Dnmt3a within coordinates of
Tssr112534 361 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240773417
MGI SNP Detail		 Chr12:3957233 Dnmt3a within coordinates of
Tssr112534 412 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258905087
MGI SNP Detail		 Chr12:3957286 Dnmt3a within coordinates of
Tssr112534 465 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs220088389
MGI SNP Detail		 Chr12:3957305 Dnmt3a within coordinates of
Tssr112534 484 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242813714
MGI SNP Detail		 Chr12:3957340 Dnmt3a within coordinates of
Tssr112534 519 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs264778558
MGI SNP Detail		 Chr12:3957386 Dnmt3a within coordinates of
Tssr112534 565 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs227219705
MGI SNP Detail		 Chr12:3957497 Dnmt3a within coordinates of
Tssr112534 676 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs51963583
MGI SNP Detail		 Chr12:3957513 Dnmt3a within coordinates of
Tssr112534 692 bp downstream
 SNP C/G G G G G G G C G G G C G G C G
rs258971099
MGI SNP Detail		 Chr12:3957556 Dnmt3a within coordinates of
Tssr112534 735 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C T C C C C C C C C C C C C
rs227486414
MGI SNP Detail		 Chr12:3958032 Dnmt3a within coordinates of
Tssr112534 1211 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs49982363
MGI SNP Detail		 Chr12:3958148 Dnmt3a within coordinates of
Tssr112534 1327 bp downstream
 SNP A/G A A A A A A A A A A G A A G A
rs245140158
MGI SNP Detail		 Chr12:3958150 Dnmt3a within coordinates of
Tssr112534 1329 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs214251122
MGI SNP Detail		 Chr12:3958705 Dnmt3a within coordinates of
Tssr112534 1884 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs51221458
MGI SNP Detail		 Chr12:3958808 Dnmt3a within coordinates of
Tssr112534 1987 bp downstream
 SNP C/T C C C C C C C C C C T C C C C
<< first < prev1 next > last >>
Showing SNP(s) 1 - 74 of 74
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory