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Mouse SNP Summary
Symbol
Name
ID 		Tssr112803
transcription start site region 112803
MGI:6040570

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Showing SNP(s) 1 - 66 of 66

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs245176304
MGI SNP Detail		 Chr12:11504113 Tssr112803 1940 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs578794929
MGI SNP Detail		 Chr12:11504199 Tssr112803 1854 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs215861059
MGI SNP Detail		 Chr12:11504269 Tssr112803 1784 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs29151989
MGI SNP Detail		 Chr12:11504270 Tssr112803 1783 bp upstream
 SNP C/T T T T C T T C C C C C C C C
rs256358201
MGI SNP Detail		 Chr12:11504282 Tssr112803 1771 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs580625150
MGI SNP Detail		 Chr12:11504335 Tssr112803 1718 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29213938
MGI SNP Detail		 Chr12:11504684 Tssr112803 1369 bp upstream
 SNP C/T C C T T
rs29149247
MGI SNP Detail		 Chr12:11504694 Tssr112803 1359 bp upstream
 SNP A/G A A G G
rs584107789
MGI SNP Detail		 Chr12:11504728 Tssr112803 1325 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs260381765
MGI SNP Detail		 Chr12:11504753 Tssr112803 1300 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs579172139
MGI SNP Detail		 Chr12:11504806 Tssr112803 1247 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs223645177
MGI SNP Detail		 Chr12:11504823 Tssr112803 1230 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs582900510
MGI SNP Detail		 Chr12:11505201 Tssr112803 852 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234210103
MGI SNP Detail		 Chr12:11505380 Tssr112803 673 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs253868388
MGI SNP Detail		 Chr12:11505421 Tssr112803 632 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219878016
MGI SNP Detail		 Chr12:11505425 Tssr112803 628 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244690488
MGI SNP Detail		 Chr12:11505432 Tssr112803 621 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29155859
MGI SNP Detail		 Chr12:11505457 Tssr112803 596 bp upstream
 SNP A/T T T A A
rs220012662
MGI SNP Detail		 Chr12:11505458 Tssr112803 595 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs244653376
MGI SNP Detail		 Chr12:11505555 Tssr112803 498 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C T C C C C
rs258689920
MGI SNP Detail		 Chr12:11505556 Tssr112803 497 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229032841
MGI SNP Detail		 Chr12:11505578 Tssr112803 475 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245121246
MGI SNP Detail		 Chr12:11505627 Rr265150 within coordinates of
Tssr112803 426 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs258005232
MGI SNP Detail		 Chr12:11505657 Rr265150 within coordinates of
Tssr112803 396 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs586482104
MGI SNP Detail		 Chr12:11505673 Rr265150 within coordinates of
Tssr112803 380 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A G A A A A A A G A A A A A A A A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs225242204
MGI SNP Detail		 Chr12:11505744 Rr265150 within coordinates of
Tssr112803 309 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251527390
MGI SNP Detail		 Chr12:11505799 Cpgi4420 within coordinates of
Gm59688 within coordinates of
Rr265150 within coordinates of
Tssr112803 254 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212230689
MGI SNP Detail		 Chr12:11505825 Cpgi4420 within coordinates of
Gm59688 within coordinates of
Rr265150 within coordinates of
Tssr112803 228 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs235487659
MGI SNP Detail		 Chr12:11505903 Cpgi4420 within coordinates of
Gm59688 within coordinates of
Rr265150 within coordinates of
Tssr112803 150 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs259258827
MGI SNP Detail		 Chr12:11505935 Cpgi4420 within coordinates of
Gm59688 within coordinates of
Rr265150 within coordinates of
Tssr112803 118 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T C T T T T T T C T T T T T T T T T T T
rs217545445
MGI SNP Detail		 Chr12:11505992 Cpgi4420 within coordinates of
Gm59688 within coordinates of
Rr265150 within coordinates of
Tssr112803 61 bp upstream
 SNP A/T A A A A A A A A T A A T A T A A A A A A A A A A A A A T A
rs582651250
MGI SNP Detail		 Chr12:11505998 Cpgi4420 within coordinates of
Gm59688 within coordinates of
Rr265150 within coordinates of
Tssr112803 55 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T
rs234196883
MGI SNP Detail		 Chr12:11506038 Cpgi4420 within coordinates of
Gm59688 within coordinates of
Rr265150 within coordinates of
Tssr112803 15 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253856295
MGI SNP Detail		 Chr12:11506042 Cpgi4420 within coordinates of
Gm59688 within coordinates of
Rr265150 within coordinates of
Tssr112803 11 bp upstream
 SNP A/C/T A A A A A A A A A A A A A A A A A A A C A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs219830187
MGI SNP Detail		 Chr12:11506050 Cpgi4420 within coordinates of
Gm59688 within coordinates of
Rr265150 within coordinates of
Tssr112803 3 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
rs239420098
MGI SNP Detail		 Chr12:11506057 Cpgi4420 within coordinates of
Gm59688 within coordinates of
Rr265150 within coordinates of
Tssr112803 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs255824172
MGI SNP Detail		 Chr12:11506062 Cpgi4420 within coordinates of
Gm59688 within coordinates of
Rr265150 within coordinates of
Tssr112803 3 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs221584673
MGI SNP Detail		 Chr12:11506317 Cpgi4420 within coordinates of
Gm59688 within coordinates of
Rad51ap2 within coordinates of
Rr265150 within coordinates of
Tssr112803 258 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241718841
MGI SNP Detail		 Chr12:11506330 Cpgi4420 within coordinates of
Gm59688 within coordinates of
Rad51ap2 within coordinates of
Rr265150 within coordinates of
Tssr112803 271 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258621891
MGI SNP Detail		 Chr12:11506346 Cpgi4420 within coordinates of
Gm59688 within coordinates of
Rad51ap2 within coordinates of
Rr265150 within coordinates of
Tssr112803 287 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222457292
MGI SNP Detail		 Chr12:11506358 Cpgi4420 within coordinates of
Gm59688 within coordinates of
Rad51ap2 within coordinates of
Rr265150 within coordinates of
Tssr112803 299 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs239788548
MGI SNP Detail		 Chr12:11506443 Gm59688 within coordinates of
Rad51ap2 within coordinates of
Rr265150 within coordinates of
Tssr112803 384 bp downstream
 SNP A/G A G
rs239046786
MGI SNP Detail		 Chr12:11506542 Gm59688 within coordinates of
Rad51ap2 within coordinates of
Rr265150 within coordinates of
Tssr112803 483 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257948685
MGI SNP Detail		 Chr12:11506611 Gm59688 within coordinates of
Rad51ap2 within coordinates of
Tssr112803 552 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229685330
MGI SNP Detail		 Chr12:11506666 Gm59688 within coordinates of
Rad51ap2 within coordinates of
Tssr112803 607 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs256148747
MGI SNP Detail		 Chr12:11506733 Gm59688 within coordinates of
Rad51ap2 within coordinates of
Tssr112803 674 bp downstream
 SNP A/G A A A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs261446204
MGI SNP Detail		 Chr12:11506940 Gm59688 within coordinates of
Rad51ap2 within coordinates of
Tssr112803 881 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29162497
MGI SNP Detail		 Chr12:11506954 Gm59688 within coordinates of
Rad51ap2 within coordinates of
Tssr112803 895 bp downstream
 SNP C/T T T C T T C C C C C C C C
rs248078084
MGI SNP Detail		 Chr12:11506956 Gm59688 within coordinates of
Rad51ap2 within coordinates of
Tssr112803 897 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217528763
MGI SNP Detail		 Chr12:11507010 Gm59688 within coordinates of
Rad51ap2 within coordinates of
Tssr112803 951 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29197640
MGI SNP Detail		 Chr12:11507157 Gm59688 within coordinates of
Rad51ap2 within coordinates of
Tssr112803 1098 bp downstream
 SNP G/T G G G G G G G T G G T G G
rs247450117
MGI SNP Detail		 Chr12:11507164 Gm59688 within coordinates of
Rad51ap2 within coordinates of
Tssr112803 1105 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213835508
MGI SNP Detail		 Chr12:11507189 Gm59688 within coordinates of
Rad51ap2 within coordinates of
Tssr112803 1130 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs237250269
MGI SNP Detail		 Chr12:11507197 Gm59688 within coordinates of
Rad51ap2 within coordinates of
Tssr112803 1138 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs261118046
MGI SNP Detail		 Chr12:11507241 Gm59688 within coordinates of
Rad51ap2 within coordinates of
Tssr112803 1182 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs213168350
MGI SNP Detail		 Chr12:11507316 Gm59688 within coordinates of
Rad51ap2 within coordinates of
Tssr112803 1257 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33846419
MGI SNP Detail		 Chr12:11507339 Gm59688 within coordinates of
Rad51ap2 within coordinates of
Tssr112803 1280 bp downstream
 SNP C/T C T T
rs252370973
MGI SNP Detail		 Chr12:11507418 Gm59688 within coordinates of
Rad51ap2 within coordinates of
Tssr112803 1359 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T T T T T T A T T T T T T T T T
rs222407359
MGI SNP Detail		 Chr12:11507572 Gm59688 within coordinates of
Rad51ap2 within coordinates of
Tssr112803 1513 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238880360
MGI SNP Detail		 Chr12:11507668 Gm59688 within coordinates of
Rad51ap2 within coordinates of
Tssr112803 1609 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251725293
MGI SNP Detail		 Chr12:11507674 Gm59688 within coordinates of
Rad51ap2 within coordinates of
Tssr112803 1615 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs221833325
MGI SNP Detail		 Chr12:11507693 Gm59688 within coordinates of
Rad51ap2 within coordinates of
Tssr112803 1634 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243921704
MGI SNP Detail		 Chr12:11507714 Gm59688 within coordinates of
Rad51ap2 within coordinates of
Tssr112803 1655 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs264626709
MGI SNP Detail		 Chr12:11507730 Gm59688 within coordinates of
Rad51ap2 within coordinates of
Tssr112803 1671 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228718457
MGI SNP Detail		 Chr12:11507735 Gm59688 within coordinates of
Rad51ap2 within coordinates of
Tssr112803 1676 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs29214892
MGI SNP Detail		 Chr12:11507776 Gm59688 within coordinates of
Rad51ap2 within coordinates of
Tssr112803 1717 bp downstream
 SNP A/G G G A G A A A A A A A A
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Showing SNP(s) 1 - 66 of 66
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory