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Mouse SNP Summary
Symbol
Name
ID 		Tssr112979
transcription start site region 112979
MGI:6040746

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Showing SNP(s) 1 - 66 of 66

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212543235
MGI SNP Detail		 Chr12:25143784 Tssr112979 1932 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs229695384
MGI SNP Detail		 Chr12:25143946 Id2 within coordinates of
Tssr112979 1770 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29187815
MGI SNP Detail		 Chr12:25144205 Id2 within coordinates of
Tssr112979 1511 bp upstream
 SNP C/T C C C T C
rs29191636
MGI SNP Detail		 Chr12:25144210 Id2 within coordinates of
Tssr112979 1506 bp upstream
 SNP A/T A A A T A A A
rs29184055
MGI SNP Detail		 Chr12:25144291 Id2 within coordinates of
Tssr112979 1425 bp upstream
 SNP C/G C C C G C C C
rs238472142
MGI SNP Detail		 Chr12:25144448 Id2 within coordinates of
Tssr112979 1268 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs29126123
MGI SNP Detail		 Chr12:25144558 Id2 within coordinates of
Tssr112979 1158 bp upstream
 SNP A/G G G G A G G
rs226571180
MGI SNP Detail		 Chr12:25144636 Id2 within coordinates of
Tssr112979 1080 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs242040748
MGI SNP Detail		 Chr12:25144663 Id2 within coordinates of
Tssr112979 1053 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs29159370
MGI SNP Detail		 Chr12:25144668 Id2 within coordinates of
Tssr112979 1048 bp upstream
 SNP C/T T T C T T T
rs4229284
MGI SNP Detail		 Chr12:25144870 Id2 within coordinates of
Tssr112979 846 bp upstream
 SNP A/C C C C C C A C C C C C
rs4229283
MGI SNP Detail		 Chr12:25144945 Id2 within coordinates of
Tssr112979 771 bp upstream
 SNP C/T C C C C C C C C T T C T T C T C C T C C C C C T C C C T C C T C C T C C C T C C C C T C C
rs4229282
MGI SNP Detail		 Chr12:25145002 Id2 within coordinates of
Tssr112979 714 bp upstream
 SNP A/T T T T T T T A
rs4229281
MGI SNP Detail		 Chr12:25145013 Id2 within coordinates of
Tssr112979 703 bp upstream
 SNP C/G C C C C C G C C C C
rs4229280
MGI SNP Detail		 Chr12:25145023 Id2 within coordinates of
Tssr112979 693 bp upstream
 SNP C/T C C C C C C T
rs4229279
MGI SNP Detail		 Chr12:25145062 Id2 within coordinates of
Tssr112979 654 bp upstream
 SNP A/G G G G G G G A
rs4229278
MGI SNP Detail		 Chr12:25145108 Id2 within coordinates of
Tssr112979 608 bp upstream
 SNP A/G G G G G G A G G
rs4229277
MGI SNP Detail		 Chr12:25145121 Id2 within coordinates of
Tssr112979 595 bp upstream
 SNP A/G A A A A G A A
rs4229276
MGI SNP Detail		 Chr12:25145130 Id2 within coordinates of
Tssr112979 586 bp upstream
 SNP A/C A C A A A A A
rs233416036
MGI SNP Detail		 Chr12:25145318 Id2 within coordinates of
Tssr112979 398 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245449082
MGI SNP Detail		 Chr12:25145395 Id2 within coordinates of
Tssr112979 321 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs29131887
MGI SNP Detail		 Chr12:25145499 Cpgi4500 within coordinates of
Id2 within coordinates of
Tssr112979 217 bp upstream
 SNP C/T C C T C C C
rs47382842
MGI SNP Detail		 Chr12:25145579 Cpgi4500 within coordinates of
Id2 within coordinates of
Tssr112979 137 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C T T C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs245414279
MGI SNP Detail		 Chr12:25145620 Cpgi4500 within coordinates of
Id2 within coordinates of
Tssr112979 96 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213343462
MGI SNP Detail		 Chr12:25145740 Cpgi4500 within coordinates of
Id2 within coordinates of
Tssr112979 2 bp downstream
Tssr115884 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs232765563
MGI SNP Detail		 Chr12:25145908 Cpgi4500 within coordinates of
Id2 within coordinates of
Tssr112979 170 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs4229285
MGI SNP Detail		 Chr12:25146090 Cpgi4500 within coordinates of
Id2 within coordinates of
Rr403250 within coordinates of
Tssr112979 352 bp downstream
Tssr115885 within coordinates of
 SNP G/T G T G G G G G
rs4229286
MGI SNP Detail		 Chr12:25146147 Cpgi4500 within coordinates of
Rr403250 within coordinates of
Tssr112979 409 bp downstream
 SNP C/G G G G G G G G C
rs29490471
MGI SNP Detail		 Chr12:25146196 Cpgi4500 within coordinates of
Rr403250 within coordinates of
Tssr112979 458 bp downstream
 SNP A/C C C A C C C
rs4229287
MGI SNP Detail		 Chr12:25146197 Cpgi4500 within coordinates of
Rr403250 within coordinates of
Tssr112979 459 bp downstream
 SNP A/C C A C C C C C C
rs4229288
MGI SNP Detail		 Chr12:25146204 Cpgi4500 within coordinates of
Rr403250 within coordinates of
Tssr112979 466 bp downstream
 SNP C/G C C C C C C C G
rs258884964
MGI SNP Detail		 Chr12:25146238 Cpgi4500 within coordinates of
Rr403250 within coordinates of
Tssr112979 500 bp downstream
 SNP A/G G A
rs4229289
MGI SNP Detail		 Chr12:25146251 Cpgi4500 within coordinates of
Rr403250 within coordinates of
Tssr112979 513 bp downstream
 SNP A/G A A A A A A A A A G G A G G A G A A G A A A A A G A A A G A G G A A G A A A G A A G A A G A A A A
rs4229290
MGI SNP Detail		 Chr12:25146274 Cpgi4500 within coordinates of
Rr403250 within coordinates of
Tssr112979 536 bp downstream
 SNP C/T C C C C C C C T
rs4229291
MGI SNP Detail		 Chr12:25146330 Cpgi4500 within coordinates of
Rr403250 within coordinates of
Tssr112979 592 bp downstream
 SNP C/T C C C C C T C C
rs232128637
MGI SNP Detail		 Chr12:25146394 Cpgi4500 within coordinates of
Tssr112979 656 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs249728157
MGI SNP Detail		 Chr12:25146415 Cpgi4500 within coordinates of
Tssr112979 677 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs225087468
MGI SNP Detail		 Chr12:25146425 Cpgi4500 within coordinates of
Tssr112979 687 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A
rs29184774
MGI SNP Detail		 Chr12:25146446 Cpgi4500 within coordinates of
Tssr112979 708 bp downstream
Tssr112980 within coordinates of
 SNP C/G G G C G G G
rs261044124
MGI SNP Detail		 Chr12:25146515 Cpgi4500 within coordinates of
Gm59395 within coordinates of
Tssr112979 777 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226503088
MGI SNP Detail		 Chr12:25146525 Cpgi4500 within coordinates of
Gm59395 within coordinates of
Tssr112979 787 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242465707
MGI SNP Detail		 Chr12:25146528 Cpgi4500 within coordinates of
Gm59395 within coordinates of
Tssr112979 790 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T
rs46745880
MGI SNP Detail		 Chr12:25146557 Cpgi4500 within coordinates of
Gm59395 within coordinates of
Tssr112979 819 bp downstream
 SNP C C C C
rs226892540
MGI SNP Detail		 Chr12:25146587 Cpgi4500 within coordinates of
Gm59395 within coordinates of
Tssr112979 849 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs239289885
MGI SNP Detail		 Chr12:25146596 Cpgi4500 within coordinates of
Gm59395 within coordinates of
Tssr112979 858 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs33843354
MGI SNP Detail		 Chr12:25146619 Cpgi4500 within coordinates of
Gm59395 within coordinates of
Tssr112979 881 bp downstream
 SNP C/T C T T C
rs232125781
MGI SNP Detail		 Chr12:25146700 Cpgi4500 within coordinates of
Gm59395 within coordinates of
Tssr112979 962 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs256944842
MGI SNP Detail		 Chr12:25146822 Gm59395 within coordinates of
Tssr112979 1084 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs218917508
MGI SNP Detail		 Chr12:25146949 Gm59395 within coordinates of
Tssr112979 1211 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G C G G G G G G G G G G G G G G C G G G G
rs29197636
MGI SNP Detail		 Chr12:25147008 Gm59395 within coordinates of
Tssr112979 1270 bp downstream
 SNP A/G A A G A A G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29125827
MGI SNP Detail		 Chr12:25147012 Gm59395 within coordinates of
Tssr112979 1274 bp downstream
 SNP G/T G G T G G T
rs211950608
MGI SNP Detail		 Chr12:25147017 Gm59395 within coordinates of
Tssr112979 1279 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs216703129
MGI SNP Detail		 Chr12:25147035 Gm59395 within coordinates of
Tssr112979 1297 bp downstream
 SNP A/G G A
rs249713259
MGI SNP Detail		 Chr12:25147053 Gm59395 within coordinates of
Tssr112979 1315 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs217232590
MGI SNP Detail		 Chr12:25147159 Gm59395 within coordinates of
Tssr112979 1421 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs237994716
MGI SNP Detail		 Chr12:25147175 Gm59395 within coordinates of
Tssr112979 1437 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240389371
MGI SNP Detail		 Chr12:25147188 Gm59395 within coordinates of
Tssr112979 1450 bp downstream
 SNP G/T G T
rs225921489
MGI SNP Detail		 Chr12:25147230 Gm59395 within coordinates of
Tssr112979 1492 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs238246000
MGI SNP Detail		 Chr12:25147233 Gm59395 within coordinates of
Tssr112979 1495 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T C T T T C T C C T T T T T T T T T T T T T T
rs249847950
MGI SNP Detail		 Chr12:25147237 Gm59395 within coordinates of
Tssr112979 1499 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs29177189
MGI SNP Detail		 Chr12:25147414 Tssr112979 1676 bp downstream
 SNP C/G G C G G
rs29127443
MGI SNP Detail		 Chr12:25147419 Tssr112979 1681 bp downstream
 SNP A/G G G A G G G
rs263832757
MGI SNP Detail		 Chr12:25147530 Tssr112979 1792 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs221672001
MGI SNP Detail		 Chr12:25147575 Tssr112979 1837 bp downstream
 SNP C/T T C
rs29126825
MGI SNP Detail		 Chr12:25147588 Tssr112979 1850 bp downstream
 SNP A/C C C A C
rs244717531
MGI SNP Detail		 Chr12:25147701 Tssr112979 1963 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
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Showing SNP(s) 1 - 66 of 66
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory