Mouse SNP Summary
|
Symbol Name ID |
Tssr113841
transcription start site region 113841 MGI:6041608 |
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SNPs to Text File
| SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs261242022 MGI SNP Detail Alliance Variant |
Chr12:73952972 | Hif1a Tssr113841 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |
| rs584075610 MGI SNP Detail Alliance Variant |
Chr12:73953001 | Hif1a Tssr113841 |
SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | |||||||||||||||||||||||
| rs586119310 MGI SNP Detail Alliance Variant |
Chr12:73953014 | Hif1a Tssr113841 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | ||||||||||||||||||||
| rs29162000 MGI SNP Detail Alliance Variant |
Chr12:73953281 | Hif1a Tssr113841 |
SNP | C/T | T | C | C | T | ||||||||||||||||||||||||||||||||||||||||||||||||||
| rs252486767 MGI SNP Detail Alliance Variant |
Chr12:73953313 | Hif1a Tssr113841 |
SNP | A/C | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A | A | A | A | A | A | A | A | A | A | A | |
| rs247331805 MGI SNP Detail Alliance Variant |
Chr12:73953422 | Hif1a Tssr113841 |
SNP | C/T | T | C | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs239475347 MGI SNP Detail Alliance Variant |
Chr12:73953492 | Hif1a Tssr113841 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C | C | C | C | T | C | C | C | C | C | C | T | C | C | C | C | C | C | C | T | C | C | C | C | |
| rs583342178 MGI SNP Detail Alliance Variant |
Chr12:73953525 | Hif1a Tssr113841 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
| rs262919622 MGI SNP Detail Alliance Variant |
Chr12:73953703 | Hif1a Tssr113841 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | G | A | A | A | A | A | G | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | |
| rs222579802 MGI SNP Detail Alliance Variant |
Chr12:73953730 | Hif1a Tssr113841 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | C | C | C | C | C | C | C | C | |
| rs242620694 MGI SNP Detail Alliance Variant |
Chr12:73953952 | Hif1a Tssr113841 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |
| rs263302693 MGI SNP Detail Alliance Variant |
Chr12:73954124 | Cpgi4761 Hif1a Tssr113841 |
SNP | A/G | G | A | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs586886781 MGI SNP Detail Alliance Variant |
Chr12:73954156 | Cpgi4761 Hif1a Tssr113841 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |
| rs229329339 MGI SNP Detail Alliance Variant |
Chr12:73954182 | Cpgi4761 Hif1a Tssr113841 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | ||
| rs248162736 MGI SNP Detail Alliance Variant |
Chr12:73954287 | Cpgi4761 Hif1a Rr467871 Tssr113841 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | T | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | ||
| rs48158075 MGI SNP Detail Alliance Variant |
Chr12:73954329 | Cpgi4761 Hif1a Rr467871 Tssr113841 |
SNP | G/T | T | G | G | T | ||||||||||||||||||||||||||||||||||||||||||||||||||
| rs227548081 MGI SNP Detail Alliance Variant |
Chr12:73954348 | Cpgi4761 Hif1a Rr467871 Tssr113841 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | A | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | ||
| rs248293932 MGI SNP Detail Alliance Variant |
Chr12:73954357 | Cpgi4761 Hif1a Rr467871 Tssr113841 |
SNP | C/T | C | T | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs261055295 MGI SNP Detail Alliance Variant |
Chr12:73954360 | Cpgi4761 Hif1a Rr467871 Tssr113841 |
SNP | A/G | G | A | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs238036798 MGI SNP Detail Alliance Variant |
Chr12:73954366 | Cpgi4761 Hif1a Rr467871 Tssr113841 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | T | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | ||
| rs249916919 MGI SNP Detail Alliance Variant |
Chr12:73954370 | Cpgi4761 Hif1a Rr467871 Tssr113841 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | T | T | ||
| rs224058507 MGI SNP Detail Alliance Variant |
Chr12:73954411 | Cpgi4761 Hif1a Rr467871 Tssr113841 |
SNP | C/T | T | C | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs581192476 MGI SNP Detail Alliance Variant |
Chr12:73954418 | Cpgi4761 Hif1a Rr467871 Tssr113841 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | ||||
| rs584914869 MGI SNP Detail Alliance Variant |
Chr12:73954425 | Cpgi4761 Hif1a Rr467871 Tssr113841 |
SNP | A/T | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A | A | A | |||
| rs234878917 MGI SNP Detail Alliance Variant |
Chr12:73954427 | Cpgi4761 Hif1a Rr467871 Tssr113841 |
SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | |||||||||||||||||||||||
| SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
| rs47637915 MGI SNP Detail Alliance Variant |
Chr12:73954433 | Cpgi4761 Hif1a Rr467871 Tssr113841 |
SNP | A/C | C | A | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs221237962 MGI SNP Detail Alliance Variant |
Chr12:73954445 | Cpgi4761 Hif1a Rr467871 Tssr113841 |
SNP | A/G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | A | A | G | A | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | A | A | G | G | G | G | G | G | G | G | ||||
| rs243973861 MGI SNP Detail Alliance Variant |
Chr12:73954464 | Cpgi4761 Hif1a Rr467871 Tssr113841 |
SNP | A/G | G | A | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs29165564 MGI SNP Detail Alliance Variant |
Chr12:73954674 | Cpgi4761 Hif1a Rr467871 Tssr113841 |
SNP | G/T | G | T | T | |||||||||||||||||||||||||||||||||||||||||||||||||||
| rs222875486 MGI SNP Detail Alliance Variant |
Chr12:73954692 | Cpgi4761 Hif1a Hif1a Rr467872 Tssr113841 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | ||
| rs245454998 MGI SNP Detail Alliance Variant |
Chr12:73954998 | Cpgi4761 Hif1a Hif1a Rr467872 Tssr113841 Tssr113842 |
SNP | C/G | G | G | C | C | C | C | G | C | G | G | C | C | C | C | C | C | C | C | G | C | C | C | C | C | C | C | G | C | G | G | C | C | G | G | G | C | C | C | C | C | G | G | C | G | C | G | C | G | ||||||
| rs255884572 MGI SNP Detail Alliance Variant |
Chr12:73955003 | Cpgi4761 Hif1a Hif1a Rr467872 Tssr113841 Tssr113842 |
SNP | C/T | C | C | C | T | T | T | T | C | T | C | C | T | T | T | T | T | T | T | T | C | T | C | T | T | C | T | C | C | C | T | C | C | C | T | C | C | C | T | C | T | T | T | C | C | T | C | C | C | C | C | ||||
| rs223843571 MGI SNP Detail Alliance Variant |
Chr12:73955071 | Cpgi4761 Hif1a Hif1a Rr467872 Tssr113841 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | ||
| rs242040176 MGI SNP Detail Alliance Variant |
Chr12:73955226 | Cpgi4761 Hif1a Rr467872 Tssr113841 |
SNP | G/T | G | G | T | T | T | T | G | T | G | T | T | T | T | T | T | T | T | G | T | G | T | T | T | G | G | T | G | G | G | T | G | G | T | G | T | T | T | G | G | T | G | G | G | T | G | |||||||||
| rs579127584 MGI SNP Detail Alliance Variant |
Chr12:73955248 | Cpgi4761 Hif1a Rr467872 Tssr113841 |
SNP | A/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | T | T | ||||||
| rs3721093 MGI SNP Detail Alliance Variant |
Chr12:73955356 | Cpgi4761 Hif1a Rr467872 Tssr113841 |
SNP | C/T | C | C | T | |||||||||||||||||||||||||||||||||||||||||||||||||||
| rs227480727 MGI SNP Detail Alliance Variant |
Chr12:73955376 | Cpgi4761 Hif1a Rr467872 Tssr113841 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | ||||
| rs244390188 MGI SNP Detail Alliance Variant |
Chr12:73955380 | Cpgi4761 Hif1a Rr467872 Tssr113841 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | ||||
| rs3721160 MGI SNP Detail Alliance Variant |
Chr12:73955387 | Cpgi4761 Hif1a Rr467872 Tssr113841 |
SNP | C/T | T | T | C | C | ||||||||||||||||||||||||||||||||||||||||||||||||||
| rs229820611 MGI SNP Detail Alliance Variant |
Chr12:73955416 | Cpgi4761 Hif1a Rr467872 Tssr113841 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | |||
| rs254135774 MGI SNP Detail Alliance Variant |
Chr12:73955436 | Cpgi4761 Hif1a Rr467872 Tssr113841 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | G | A | G | A | A | A | A | G | A | A | A | A | A | A | G | A | A | A | A | G | A | G | A | A | G | G | ||||
| rs3721844 MGI SNP Detail Alliance Variant |
Chr12:73955510 | Cpgi4761 Hif1a Rr467872 Tssr113841 |
SNP | C/T | C | C | T | T | C | |||||||||||||||||||||||||||||||||||||||||||||||||
| rs29214429 MGI SNP Detail Alliance Variant |
Chr12:73955793 | Hif1a Rr467872 Tssr113841 |
SNP | A/G | G | G | A | A | A | G | ||||||||||||||||||||||||||||||||||||||||||||||||
| rs29143721 MGI SNP Detail Alliance Variant |
Chr12:73955801 | Hif1a Rr467872 Tssr113841 |
SNP | C/T | T | T | C | C | C | T | ||||||||||||||||||||||||||||||||||||||||||||||||
| rs48330186 MGI SNP Detail Alliance Variant |
Chr12:73955803 | Hif1a Rr467872 Tssr113841 |
SNP | A/G | G | G | A | A | G | |||||||||||||||||||||||||||||||||||||||||||||||||
| rs239683265 MGI SNP Detail Alliance Variant |
Chr12:73955805 | Hif1a Rr467872 Tssr113841 |
SNP | A/T | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A | A | A | |
| rs257681670 MGI SNP Detail Alliance Variant |
Chr12:73955870 | Hif1a Rr467872 Tssr113841 |
SNP | A/C | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A | A | A | |
| rs46910961 MGI SNP Detail Alliance Variant |
Chr12:73956234 | Hif1a Rr467872 Tssr113841 |
SNP | A/G | G | G | A | A | G | |||||||||||||||||||||||||||||||||||||||||||||||||
| rs235696984 MGI SNP Detail Alliance Variant |
Chr12:73956295 | Hif1a Tssr113841 |
SNP | A/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | T | T | T | |
| rs249917275 MGI SNP Detail Alliance Variant |
Chr12:73956437 | Hif1a Tssr113841 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
| SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
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C57BL/6NJ
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C57BR/cdJ
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C57L/J
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C58/J
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CAST/EiJ
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CBA/J
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CE/J
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CZECHII/EiJ
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DBA/1J
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DBA/2J
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FVB/NJ
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I/LnJ
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JF1/MsJ
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KK/HlJ
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LEWES/EiJ
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LG/J
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LP/J
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MA/MyJ
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MOLF/EiJ
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NOD/ShiLtJ
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NON/ShiLtJ
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NZB/BlNJ
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NZO/HlLtJ
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NZW/LacJ
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PL/J
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PWK/PhJ
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QSi3/Ianm
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QSi5/Ianm
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RF/J
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RIIIS/J
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SEA/GnJ
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SJL/J
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SM/J
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SPRET/EiJ
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ST/bJ
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SWR/J
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WSB/EiJ
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ZALENDE/EiJ
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| rs52048544 MGI SNP Detail Alliance Variant |
Chr12:73956463 | Hif1a Tssr113841 |
SNP | A/G | G | G | A | A | G | |||||||||||||||||||||||||||||||||||||||||||||||||
| rs49456685 MGI SNP Detail Alliance Variant |
Chr12:73956518 | Hif1a Tssr113841 |
SNP | A/T | A | A | T | T | A | |||||||||||||||||||||||||||||||||||||||||||||||||
| rs47003459 MGI SNP Detail Alliance Variant |
Chr12:73956519 | Hif1a Tssr113841 |
SNP | A/T | A | A | T | T | A | |||||||||||||||||||||||||||||||||||||||||||||||||
| rs387162236 MGI SNP Detail Alliance Variant |
Chr12:73956708 | Hif1a Tssr113841 |
SNP | A/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | T | |
| rs51238084 MGI SNP Detail Alliance Variant |
Chr12:73956762 | Hif1a Tssr113841 |
SNP | C/T | C | C | T | T | C | |||||||||||||||||||||||||||||||||||||||||||||||||
| rs247054516 MGI SNP Detail Alliance Variant |
Chr12:73956889 | Hif1a Tssr113841 Tssr113845 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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