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Mouse SNP Summary
Symbol
Name
ID 		Tssr114077
transcription start site region 114077
MGI:6041844

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Showing SNP(s) 1 - 72 of 72

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251003989
MGI SNP Detail		 Chr12:79176363 Tssr114077 1211 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T C T T T T T T T T T T T T
rs221045112
MGI SNP Detail		 Chr12:79176386 Tssr114077 1188 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G C G G G G G G G G G G G G
rs238644747
MGI SNP Detail		 Chr12:79176505 Tssr114077 1069 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs262132827
MGI SNP Detail		 Chr12:79176538 Tssr114077 1036 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A C A A A A A A A C A A A A
rs222119378
MGI SNP Detail		 Chr12:79176565 Tssr114077 1009 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C A C C C C C C C A C C C C
rs244455924
MGI SNP Detail		 Chr12:79176577 Tssr114077 997 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C T C C C C C C C C C C C C
rs264481221
MGI SNP Detail		 Chr12:79176594 Tssr114077 980 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228577021
MGI SNP Detail		 Chr12:79176600 Tssr114077 974 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs50565703
MGI SNP Detail		 Chr12:79176745 Tssr114077 829 bp upstream
 SNP A/G G G G G G G G G G G A G G A G
rs259292501
MGI SNP Detail		 Chr12:79176793 Tssr114077 781 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226687511
MGI SNP Detail		 Chr12:79176824 Tssr114077 750 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T C T T T T T T T T T T T T
rs244878670
MGI SNP Detail		 Chr12:79176840 Tssr114077 734 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs213061252
MGI SNP Detail		 Chr12:79176898 Tssr114077 676 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs227622362
MGI SNP Detail		 Chr12:79176923 Tssr114077 651 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T C T T T T T T T C T T T T
rs260134598
MGI SNP Detail		 Chr12:79176969 Tssr114077 605 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T A T T T T T T T T T T T T
rs217579587
MGI SNP Detail		 Chr12:79177012 Tssr114077 562 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs233280881
MGI SNP Detail		 Chr12:79177020 Tssr114077 554 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A C A A A A A C A A A A A A C A A A A A A C A A A A
rs52482775
MGI SNP Detail		 Chr12:79177052 Tssr114077 522 bp upstream
 SNP A/C A A A A A A C A A A C A A C A
rs49528145
MGI SNP Detail		 Chr12:79177082 Tssr114077 492 bp upstream
 SNP C/T T T T T T T T T T T C T T C T
rs231175174
MGI SNP Detail		 Chr12:79177205 Cpgi4801 within coordinates of
Tssr114077 369 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs49701341
MGI SNP Detail		 Chr12:79177214 Cpgi4801 within coordinates of
Tssr114077 360 bp upstream
 SNP C/T C C C C C C C C C C T C C T
rs221403810
MGI SNP Detail		 Chr12:79177216 Cpgi4801 within coordinates of
Tssr114077 358 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241692446
MGI SNP Detail		 Chr12:79177384 Cpgi4801 within coordinates of
Tssr114077 190 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs52037443
MGI SNP Detail		 Chr12:79177448 Cpgi4801 within coordinates of
Tssr114077 126 bp upstream
 SNP C/T C C T T C C T C C T T T T C T C T
rs222795847
MGI SNP Detail		 Chr12:79177491 Cpgi4801 within coordinates of
Tssr114077 83 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs241341834
MGI SNP Detail		 Chr12:79177504 Cpgi4801 within coordinates of
Tssr114077 70 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G
rs48375047
MGI SNP Detail		 Chr12:79177513 Cpgi4801 within coordinates of
Tssr114077 61 bp upstream
 SNP A/C/T C C C C C C C T A C C A T C
rs226749628
MGI SNP Detail		 Chr12:79177523 Cpgi4801 within coordinates of
Tssr114077 51 bp upstream
Tssr3873 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246127883
MGI SNP Detail		 Chr12:79177525 Cpgi4801 within coordinates of
Tssr114077 49 bp upstream
Tssr3873 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51716682
MGI SNP Detail		 Chr12:79177540 Cpgi4801 within coordinates of
Tssr114077 34 bp upstream
Tssr3873 within coordinates of
 SNP C/T T T T T T T T T T T C T T C T
rs227963695
MGI SNP Detail		 Chr12:79177823 Arg2 within coordinates of
Cpgi4801 within coordinates of
Tssr114077 233 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G T G G G G G G G G G G G G G G G T T T
rs254730133
MGI SNP Detail		 Chr12:79177828 Arg2 within coordinates of
Cpgi4801 within coordinates of
Tssr114077 238 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs265915402
MGI SNP Detail		 Chr12:79177833 Arg2 within coordinates of
Cpgi4801 within coordinates of
Tssr114077 243 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs227505524
MGI SNP Detail		 Chr12:79177834 Arg2 within coordinates of
Cpgi4801 within coordinates of
Tssr114077 244 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs49803339
MGI SNP Detail		 Chr12:79177866 Arg2 within coordinates of
Cpgi4801 within coordinates of
Tssr114077 276 bp downstream
 SNP A/G G G G G G G A G G G G G G G G
rs214058433
MGI SNP Detail		 Chr12:79177922 Arg2 within coordinates of
Cpgi4801 within coordinates of
Tssr114077 332 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs231231640
MGI SNP Detail		 Chr12:79177962 Arg2 within coordinates of
Cpgi4801 within coordinates of
Tssr114077 372 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G A G G G G G G G G G G G G
rs253715937
MGI SNP Detail		 Chr12:79177978 Arg2 within coordinates of
Cpgi4801 within coordinates of
Tssr114077 388 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G A G G G G G G G G G G G G G G G A A A
rs213156157
MGI SNP Detail		 Chr12:79178058 Arg2 within coordinates of
Cpgi4801 within coordinates of
Tssr114077 468 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs47967150
MGI SNP Detail		 Chr12:79178131 Arg2 within coordinates of
Cpgi4801 within coordinates of
Tssr114077 541 bp downstream
 SNP C/T C C C C C C T C C C C C C C C
rs48733271
MGI SNP Detail		 Chr12:79178139 Arg2 within coordinates of
Cpgi4801 within coordinates of
Tssr114077 549 bp downstream
 SNP A/G G G G G G G G G G G G A G G A
rs223068821
MGI SNP Detail		 Chr12:79178150 Arg2 within coordinates of
Cpgi4801 within coordinates of
Tssr114077 560 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs50726364
MGI SNP Detail		 Chr12:79178164 Arg2 within coordinates of
Cpgi4801 within coordinates of
Tssr114077 574 bp downstream
 SNP A/T T T T T T T T T T T A T T A T
rs252933175
MGI SNP Detail		 Chr12:79178339 Arg2 within coordinates of
Tssr114077 749 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs46492182
MGI SNP Detail		 Chr12:79178351 Arg2 within coordinates of
Tssr114077 761 bp downstream
 SNP A/C C C C C C C C C C C A C C A C
rs220333489
MGI SNP Detail		 Chr12:79178373 Arg2 within coordinates of
Tssr114077 783 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243379063
MGI SNP Detail		 Chr12:79178425 Arg2 within coordinates of
Tssr114077 835 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs264905870
MGI SNP Detail		 Chr12:79178428 Arg2 within coordinates of
Tssr114077 838 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220281215
MGI SNP Detail		 Chr12:79178460 Arg2 within coordinates of
Tssr114077 870 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs49140217
MGI SNP Detail		 Chr12:79178517 Arg2 within coordinates of
Tssr114077 927 bp downstream
 SNP G/T T T T T G T T G G G T G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs45677119
MGI SNP Detail		 Chr12:79178528 Arg2 within coordinates of
Tssr114077 938 bp downstream
 SNP A/C C C C C C C C C C C A C C A C
rs227564112
MGI SNP Detail		 Chr12:79178705 Arg2 within coordinates of
Tssr114077 1115 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245211164
MGI SNP Detail		 Chr12:79178706 Arg2 within coordinates of
Tssr114077 1116 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs581089622
MGI SNP Detail		 Chr12:79178715 Arg2 within coordinates of
Tssr114077 1125 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255969915
MGI SNP Detail		 Chr12:79178812 Arg2 within coordinates of
Tssr114077 1222 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs229800597
MGI SNP Detail		 Chr12:79178930 Arg2 within coordinates of
Tssr114077 1340 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs51068649
MGI SNP Detail		 Chr12:79178952 Arg2 within coordinates of
Tssr114077 1362 bp downstream
Tssr116820 within coordinates of
 SNP G/T T T T T T T G T T T G T T G T
rs211937339
MGI SNP Detail		 Chr12:79178967 Arg2 within coordinates of
Tssr114077 1377 bp downstream
Tssr116821 within coordinates of
 SNP A/C/T A A A A A A A A A A A A A A A A A A A T A A A A A A A T A A A A A T A A A A A A T A A A A A A A C A A A A
rs240033616
MGI SNP Detail		 Chr12:79179058 Arg2 within coordinates of
Tssr114077 1468 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260486952
MGI SNP Detail		 Chr12:79179089 Arg2 within coordinates of
Tssr114077 1499 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216897005
MGI SNP Detail		 Chr12:79179090 Arg2 within coordinates of
Tssr114077 1500 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs235206801
MGI SNP Detail		 Chr12:79179092 Arg2 within coordinates of
Tssr114077 1502 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50946938
MGI SNP Detail		 Chr12:79179253 Arg2 within coordinates of
Tssr114077 1663 bp downstream
 SNP A/G A A A A A A G A A A G A A G A
rs220394775
MGI SNP Detail		 Chr12:79179321 Arg2 within coordinates of
Tssr114077 1731 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs51926148
MGI SNP Detail		 Chr12:79179354 Arg2 within coordinates of
Tssr114077 1764 bp downstream
 SNP C/T T T T T T T C T T T C T T C T
rs48821040
MGI SNP Detail		 Chr12:79179368 Arg2 within coordinates of
Tssr114077 1778 bp downstream
 SNP A/C C C C C C C C C C C C A C C A
rs256311134
MGI SNP Detail		 Chr12:79179401 Arg2 within coordinates of
Tssr114077 1811 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220323675
MGI SNP Detail		 Chr12:79179444 Arg2 within coordinates of
Tssr114077 1854 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs248488469
MGI SNP Detail		 Chr12:79179466 Arg2 within coordinates of
Tssr114077 1876 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs51701192
MGI SNP Detail		 Chr12:79179483 Arg2 within coordinates of
Tssr114077 1893 bp downstream
 SNP A/G A A A A A A G A A A G A A G A
rs221345881
MGI SNP Detail		 Chr12:79179514 Arg2 within coordinates of
Tssr114077 1924 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239254179
MGI SNP Detail		 Chr12:79179534 Arg2 within coordinates of
Tssr114077 1944 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 72 of 72
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory