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Mouse SNP Summary
Symbol
Name
ID 		Tssr114948
transcription start site region 114948
MGI:6042715

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Showing SNP(s) 1 - 64 of 64

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs216550019
MGI SNP Detail		 Chr12:108142753 Setd3 within coordinates of
Tssr114948 1989 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231151284
MGI SNP Detail		 Chr12:108142881 Setd3 within coordinates of
Tssr114948 1861 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs29205709
MGI SNP Detail		 Chr12:108142923 Setd3 within coordinates of
Tssr114948 1819 bp upstream
 SNP A/G G G A A G G G A A A G A
rs213028762
MGI SNP Detail		 Chr12:108143134 Setd3 within coordinates of
Tssr114948 1608 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230003366
MGI SNP Detail		 Chr12:108143342 Setd3 within coordinates of
Tssr114948 1400 bp upstream
 SNP A/T A A A A T A A A A A T T A A A A A A A T T A T A A A A T T A A A A T T A A A A A T A T A A A A A T A A A A
rs248922764
MGI SNP Detail		 Chr12:108143413 Setd3 within coordinates of
Tssr114948 1329 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs52038171
MGI SNP Detail		 Chr12:108143450 Setd3 within coordinates of
Tssr114948 1292 bp upstream
 SNP A/G A G A G A
rs235539823
MGI SNP Detail		 Chr12:108143494 Setd3 within coordinates of
Tssr114948 1248 bp upstream
 SNP A/G A A A A G A A A A A G G A A A A A A A G G A G A A A A G G A A A A G G A A A A A G A G A A A A A G A A A A
rs253569847
MGI SNP Detail		 Chr12:108143576 Setd3 within coordinates of
Tssr114948 1166 bp upstream
 SNP C/T T T T T C T T T T T C C T T T T T T T C C T C T T T T C C T T T T C C T T T T T C T C T T T T T C T T T T
rs245719204
MGI SNP Detail		 Chr12:108143805 Setd3 within coordinates of
Tssr114948 937 bp upstream
 SNP A/T A T
rs236894549
MGI SNP Detail		 Chr12:108143895 Setd3 within coordinates of
Tssr114948 847 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29221986
MGI SNP Detail		 Chr12:108143908 Setd3 within coordinates of
Tssr114948 834 bp upstream
 SNP G/T G T G G T T
rs29190235
MGI SNP Detail		 Chr12:108143957 Setd3 within coordinates of
Tssr114948 785 bp upstream
 SNP A/T A A T A T T T
rs235677957
MGI SNP Detail		 Chr12:108143989 Setd3 within coordinates of
Tssr114948 753 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29211639
MGI SNP Detail		 Chr12:108144078 Setd3 within coordinates of
Tssr114948 664 bp upstream
 SNP C/T T T C T C C C
rs221738474
MGI SNP Detail		 Chr12:108144198 Setd3 within coordinates of
Tssr114948 544 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240442188
MGI SNP Detail		 Chr12:108144238 Setd3 within coordinates of
Tssr114948 504 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs263363238
MGI SNP Detail		 Chr12:108144251 Setd3 within coordinates of
Tssr114948 491 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29188154
MGI SNP Detail		 Chr12:108144334 Setd3 within coordinates of
Tssr114948 408 bp upstream
 SNP C/T T T T C C C
rs250982260
MGI SNP Detail		 Chr12:108144355 Setd3 within coordinates of
Tssr114948 387 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs581481617
MGI SNP Detail		 Chr12:108144395 Setd3 within coordinates of
Tssr114948 347 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs264931046
MGI SNP Detail		 Chr12:108144461 Setd3 within coordinates of
Tssr114948 281 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs29161258
MGI SNP Detail		 Chr12:108144593 Cpgi5076 within coordinates of
Setd3 within coordinates of
Tssr114948 149 bp upstream
 SNP A/G A A G A G G G
rs47123267
MGI SNP Detail		 Chr12:108144616 Cpgi5076 within coordinates of
Setd3 within coordinates of
Tssr114948 126 bp upstream
 SNP C C C
rs29129798
MGI SNP Detail		 Chr12:108144651 Cpgi5076 within coordinates of
Setd3 within coordinates of
Tssr114948 91 bp upstream
 SNP A/G G G A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29132369
MGI SNP Detail		 Chr12:108144661 Cpgi5076 within coordinates of
Setd3 within coordinates of
Tssr114948 81 bp upstream
 SNP C/T T C C
rs29177254
MGI SNP Detail		 Chr12:108144738 Cpgi5076 within coordinates of
Setd3 within coordinates of
Tssr114948 4 bp upstream
 SNP A/G A G G G G
rs234869983
MGI SNP Detail		 Chr12:108144784 Cpgi5076 within coordinates of
Setd3 within coordinates of
Tssr114948 28 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51726864
MGI SNP Detail		 Chr12:108144838 Cpgi5076 within coordinates of
Setd3 within coordinates of
Tssr114948 82 bp downstream
 SNP A/G G G A G
rs215709360
MGI SNP Detail		 Chr12:108144843 Cpgi5076 within coordinates of
Setd3 within coordinates of
Tssr114948 87 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs238953125
MGI SNP Detail		 Chr12:108144900 Cpgi5076 within coordinates of
Setd3 within coordinates of
Tssr114948 144 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257000330
MGI SNP Detail		 Chr12:108144954 Cpgi5076 within coordinates of
Setd3 within coordinates of
Tssr114948 198 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs220909160
MGI SNP Detail		 Chr12:108145003 Cpgi5076 within coordinates of
Setd3 within coordinates of
Tssr114948 247 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229778324
MGI SNP Detail		 Chr12:108145027 Cpgi5076 within coordinates of
Setd3 within coordinates of
Tssr114948 271 bp downstream
 SNP A/G G G A G G G G G A G G G G G G G G G G A G G G A G G G G A G A G G A A A A G A G A G A A A G A A A G
rs253000353
MGI SNP Detail		 Chr12:108145057 Cpgi5076 within coordinates of
Setd3 within coordinates of
Tssr114948 301 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221791819
MGI SNP Detail		 Chr12:108145090 Cpgi5076 within coordinates of
Setd3 within coordinates of
Tssr114948 334 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239716260
MGI SNP Detail		 Chr12:108145127 Cpgi5076 within coordinates of
Setd3 within coordinates of
Tssr114948 371 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs265404250
MGI SNP Detail		 Chr12:108145133 Cpgi5076 within coordinates of
Setd3 within coordinates of
Tssr114948 377 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T C T T T T T T T C T T T T
rs223822265
MGI SNP Detail		 Chr12:108145215 Cpgi5076 within coordinates of
Setd3 within coordinates of
Tssr114948 459 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G C C G C G G G G G G G G G G G G G G G G G G G G G G G G G G
rs238097833
MGI SNP Detail		 Chr12:108145320 Cpgi5076 within coordinates of
Setd3 within coordinates of
Tssr114948 564 bp downstream
 SNP C/T T C
rs262101873
MGI SNP Detail		 Chr12:108145337 Cpgi5076 within coordinates of
Setd3 within coordinates of
Tssr114948 581 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs224462692
MGI SNP Detail		 Chr12:108145393 Cpgi5076 within coordinates of
Setd3 within coordinates of
Tssr114948 637 bp downstream
Tssr114950 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs249032779
MGI SNP Detail		 Chr12:108145401 Cpgi5076 within coordinates of
Setd3 within coordinates of
Tssr114948 645 bp downstream
Tssr114951 within coordinates of
 SNP C/T T T C T T T T T C T T T T T T T T C T T T T T T T C T T T T T C T T T T T T T C T T T T T T T T T
rs256855505
MGI SNP Detail		 Chr12:108145440 Cpgi5076 within coordinates of
Setd3 within coordinates of
Tssr114948 684 bp downstream
 SNP A/G G A
rs260793624
MGI SNP Detail		 Chr12:108145532 Cpgi5076 within coordinates of
Setd3 within coordinates of
Tssr114948 776 bp downstream
Tssr117677 within coordinates of
 SNP G/T T G G T T T T G G T T T T T T G G G G G G G G T G G G G G G G G G G G T G G G G G G G G
rs228165735
MGI SNP Detail		 Chr12:108145555 Cpgi5076 within coordinates of
Setd3 within coordinates of
Tssr114948 799 bp downstream
Tssr117677 within coordinates of
 SNP C/G C C C G C C C C C G C C C C C C C C G C G C C C C C C C C G C C C C C G C G C C C C C C C C C C
rs584855522
MGI SNP Detail		 Chr12:108145594 Cpgi5076 within coordinates of
Rr403488 within coordinates of
Tssr114948 838 bp downstream
Tssr117677 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252348729
MGI SNP Detail		 Chr12:108145629 Cpgi5076 within coordinates of
Rr403488 within coordinates of
Tssr114948 873 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T T G T G G G G G G G G G G G G G G G G G G G G G G G G G
rs579441654
MGI SNP Detail		 Chr12:108145644 Cpgi5076 within coordinates of
Rr403488 within coordinates of
Tssr114948 888 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215228086
MGI SNP Detail		 Chr12:108145777 Cpgi5076 within coordinates of
Rr403488 within coordinates of
Tssr114948 1021 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29491336
MGI SNP Detail		 Chr12:108145836 Cpgi5076 within coordinates of
Rr403488 within coordinates of
Tssr114948 1080 bp downstream
Tssr114952 within coordinates of
 SNP A/C A C A A A
rs255212192
MGI SNP Detail		 Chr12:108145847 Ccnk within coordinates of
Cpgi5076 within coordinates of
Rr403488 within coordinates of
Tssr114948 1091 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29176259
MGI SNP Detail		 Chr12:108145871 Ccnk within coordinates of
Cpgi5076 within coordinates of
Rr403488 within coordinates of
Tssr114948 1115 bp downstream
 SNP G/T G G T
rs29160725
MGI SNP Detail		 Chr12:108145994 Ccnk within coordinates of
Cpgi5076 within coordinates of
Tssr114948 1238 bp downstream
 SNP C/T C C C T
rs253059338
MGI SNP Detail		 Chr12:108146072 Ccnk within coordinates of
Cpgi5076 within coordinates of
Tssr114948 1316 bp downstream
Tssr114953 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216465009
MGI SNP Detail		 Chr12:108146257 Ccnk within coordinates of
Cpgi5076 within coordinates of
Tssr114948 1501 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs240656861
MGI SNP Detail		 Chr12:108146340 Ccnk within coordinates of
Cpgi5076 within coordinates of
Tssr114948 1584 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs49254438
MGI SNP Detail		 Chr12:108146350 Ccnk within coordinates of
Cpgi5076 within coordinates of
Tssr114948 1594 bp downstream
 SNP A/G G G A G G A G G G A A A G A G
rs222719269
MGI SNP Detail		 Chr12:108146374 Ccnk within coordinates of
Cpgi5076 within coordinates of
Tssr114948 1618 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243663833
MGI SNP Detail		 Chr12:108146473 Ccnk within coordinates of
Cpgi5076 within coordinates of
Tssr114948 1717 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261779921
MGI SNP Detail		 Chr12:108146529 Ccnk within coordinates of
Cpgi5076 within coordinates of
Tssr114948 1773 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs218462418
MGI SNP Detail		 Chr12:108146559 Ccnk within coordinates of
Cpgi5076 within coordinates of
Tssr114948 1803 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29191717
MGI SNP Detail		 Chr12:108146595 Ccnk within coordinates of
Cpgi5076 within coordinates of
Tssr114948 1839 bp downstream
 SNP A/G A A G G A A G A G G G G G G G G G G G
rs260823495
MGI SNP Detail		 Chr12:108146690 Ccnk within coordinates of
Tssr114948 1934 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
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Showing SNP(s) 1 - 64 of 64
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory