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Mouse SNP Summary
Symbol
Name
ID 		Tssr114988
transcription start site region 114988
MGI:6042755

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Showing SNP(s) 1 - 67 of 67

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs242733301
MGI SNP Detail		 Chr12:108571262 Evl within coordinates of
Tssr114988 1936 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs6207690
MGI SNP Detail		 Chr12:108571517 Evl within coordinates of
Tssr114988 1681 bp upstream
 SNP C/T T T T T C T T C T T C C C T C T
rs6207726
MGI SNP Detail		 Chr12:108571540 Evl within coordinates of
Tssr114988 1658 bp upstream
 SNP C/T T T C T T C T T C T T C C T C T
rs258734601
MGI SNP Detail		 Chr12:108571603 Evl within coordinates of
Rr472571 within coordinates of
Tssr114988 1595 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs227445358
MGI SNP Detail		 Chr12:108571653 Evl within coordinates of
Rr472571 within coordinates of
Tssr114988 1545 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs257145892
MGI SNP Detail		 Chr12:108571705 Evl within coordinates of
Rr472571 within coordinates of
Tssr114988 1493 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214718571
MGI SNP Detail		 Chr12:108571771 Evl within coordinates of
Rr472571 within coordinates of
Tssr114988 1427 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs238074890
MGI SNP Detail		 Chr12:108571862 Evl within coordinates of
Rr472571 within coordinates of
Tssr114988 1336 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249891352
MGI SNP Detail		 Chr12:108571886 Evl within coordinates of
Rr472571 within coordinates of
Tssr114988 1312 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs212910740
MGI SNP Detail		 Chr12:108571890 Evl within coordinates of
Rr472571 within coordinates of
Tssr114988 1308 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs229956017
MGI SNP Detail		 Chr12:108572095 Evl within coordinates of
Rr472572 within coordinates of
Tssr114988 1103 bp upstream
 SNP C/T C C C C T C C C C C T T C C C C C C C C T C T C C C C T T C C C C T T C C C C C T C C C C C C C C C C C C
rs255394187
MGI SNP Detail		 Chr12:108572098 Evl within coordinates of
Rr472572 within coordinates of
Tssr114988 1100 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs38212252
MGI SNP Detail		 Chr12:108572313 Evl within coordinates of
Rr472572 within coordinates of
Tssr114988 885 bp upstream
 SNP C/T C C T C C T T C C T T T C T C
rs263073030
MGI SNP Detail		 Chr12:108572592 Evl within coordinates of
Rr472572 within coordinates of
Tssr114988 606 bp upstream
 SNP C/T T T T T C T T T T T C C T T T T T T T T C T C T T T T C C T T T T C C T T T T T C T T T T T T T T T T T T
rs223807194
MGI SNP Detail		 Chr12:108572745 Evl within coordinates of
Rr472572 within coordinates of
Tssr114988 453 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29165675
MGI SNP Detail		 Chr12:108572759 Evl within coordinates of
Rr472572 within coordinates of
Tssr114988 439 bp upstream
 SNP A/G A A G G A A G G G G G G G G G G G G
rs262159830
MGI SNP Detail		 Chr12:108572794 Evl within coordinates of
Rr472572 within coordinates of
Tssr114988 404 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217647145
MGI SNP Detail		 Chr12:108572882 Evl within coordinates of
Rr472572 within coordinates of
Tssr114988 316 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241257980
MGI SNP Detail		 Chr12:108572884 Evl within coordinates of
Rr472572 within coordinates of
Tssr114988 314 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs258706375
MGI SNP Detail		 Chr12:108572947 Evl within coordinates of
Rr472572 within coordinates of
Tssr114988 251 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227391946
MGI SNP Detail		 Chr12:108573038 Evl within coordinates of
Rr472572 within coordinates of
Tssr114988 160 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs38177840
MGI SNP Detail		 Chr12:108573120 Evl within coordinates of
Tssr114988 78 bp upstream
 SNP A/G G G G G G G A G G G G G G G G
rs584649668
MGI SNP Detail		 Chr12:108573159 Evl within coordinates of
Tssr114988 39 bp upstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs37830193
MGI SNP Detail		 Chr12:108573346 Evl within coordinates of
Tssr114988 144 bp downstream
 SNP A/G G G G A A G G A A A G A
rs229774556
MGI SNP Detail		 Chr12:108573428 Evl within coordinates of
Tssr114988 226 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs37154038
MGI SNP Detail		 Chr12:108573543 Evl within coordinates of
Tssr114988 341 bp downstream
 SNP C/G G G C G G C G G G C C C G C G
rs36773286
MGI SNP Detail		 Chr12:108573620 Evl within coordinates of
Tssr114988 418 bp downstream
 SNP A/G G G A G G A G G G A A A G A G
rs224284430
MGI SNP Detail		 Chr12:108573646 Evl within coordinates of
Tssr114988 444 bp downstream
 SNP A/G A A A A G A A A A A G G A A A A A A A G G A G A A A A G G A A A A G G A A A A A G A A A A A A A G A A A A
rs248922477
MGI SNP Detail		 Chr12:108573719 Evl within coordinates of
Tssr114988 517 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216825763
MGI SNP Detail		 Chr12:108573720 Evl within coordinates of
Tssr114988 518 bp downstream
 SNP C/T C C C C T C C C C C T T C C C C C C C C T C T C C C C T T C C C C T T C C C C C T C C C C C C C C C C C C
rs38125474
MGI SNP Detail		 Chr12:108573767 Evl within coordinates of
Tssr114988 565 bp downstream
 SNP C/T T T T T T T C T T T T T T T T
rs258837886
MGI SNP Detail		 Chr12:108573924 Evl within coordinates of
Tssr114988 722 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs215453140
MGI SNP Detail		 Chr12:108573931 Evl within coordinates of
Tssr114988 729 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236474969
MGI SNP Detail		 Chr12:108573967 Evl within coordinates of
Tssr114988 765 bp downstream
 SNP A/G A A A A G A A A A A G G A A A A A A A G G A G A A A A G G A A A A G G A A A A A G A A A A A A A G A A A A
rs249233697
MGI SNP Detail		 Chr12:108573977 Evl within coordinates of
Tssr114988 775 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs218324871
MGI SNP Detail		 Chr12:108573993 Evl within coordinates of
Tssr114988 791 bp downstream
 SNP G/T G G G G T G G G G G T T G G G G G G G G T G T G G G G T T G G G G T T G G G G G T G G G G G G G G G G G G
rs241238574
MGI SNP Detail		 Chr12:108574084 Evl within coordinates of
Tssr114988 882 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252398966
MGI SNP Detail		 Chr12:108574085 Evl within coordinates of
Tssr114988 883 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs38356699
MGI SNP Detail		 Chr12:108574155 Evl within coordinates of
Tssr114988 953 bp downstream
 SNP G/T G G G G G G T G G G G G G G G
rs224684298
MGI SNP Detail		 Chr12:108574159 Evl within coordinates of
Tssr114988 957 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs38152665
MGI SNP Detail		 Chr12:108574233 Evl within coordinates of
Tssr114988 1031 bp downstream
 SNP C/T T T T T T T C T T T T T T T
rs36731108
MGI SNP Detail		 Chr12:108574241 Evl within coordinates of
Tssr114988 1039 bp downstream
 SNP A/G G G G A G G A G G G A A A G G
rs37339530
MGI SNP Detail		 Chr12:108574252 Evl within coordinates of
Tssr114988 1050 bp downstream
 SNP A/G G G G G G A A G G A A G G
rs51070446
MGI SNP Detail		 Chr12:108574265 Evl within coordinates of
Tssr114988 1063 bp downstream
 SNP C/T C C C T
rs37797660
MGI SNP Detail		 Chr12:108574266 Evl within coordinates of
Tssr114988 1064 bp downstream
 SNP A/G A A A A A A G A G A A G G G G G A
rs229235433
MGI SNP Detail		 Chr12:108574286 Evl within coordinates of
Tssr114988 1084 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs36835969
MGI SNP Detail		 Chr12:108574329 Evl within coordinates of
Tssr114988 1127 bp downstream
 SNP A/G A A A A A A G A A A A A A A A
rs216729607
MGI SNP Detail		 Chr12:108574351 Evl within coordinates of
Tssr114988 1149 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs38520974
MGI SNP Detail		 Chr12:108574433 Evl within coordinates of
Tssr114988 1231 bp downstream
 SNP A/C A A A A A A C A A A A A A A A
rs37226638
MGI SNP Detail		 Chr12:108574465 Evl within coordinates of
Tssr114988 1263 bp downstream
 SNP A/C C C C A C C A A C C A A A A C A C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214954947
MGI SNP Detail		 Chr12:108574540 Evl within coordinates of
Tssr114988 1338 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs36454899
MGI SNP Detail		 Chr12:108574625 Evl within coordinates of
Tssr114988 1423 bp downstream
 SNP A/G G G G A G G A A G G A A A A G A G
rs249211255
MGI SNP Detail		 Chr12:108574650 Evl within coordinates of
Tssr114988 1448 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212436687
MGI SNP Detail		 Chr12:108574662 Evl within coordinates of
Tssr114988 1460 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs235487164
MGI SNP Detail		 Chr12:108574682 Evl within coordinates of
Tssr114988 1480 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs252895794
MGI SNP Detail		 Chr12:108574686 Evl within coordinates of
Tssr114988 1484 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs224729559
MGI SNP Detail		 Chr12:108574692 Evl within coordinates of
Tssr114988 1490 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs244773427
MGI SNP Detail		 Chr12:108574696 Evl within coordinates of
Tssr114988 1494 bp downstream
 SNP A/G A A A A G A A A A A G A A A A A A A G G A G A A A A G G A A A A G G A A A A A G A A A A A A A G A A A A
rs262320414
MGI SNP Detail		 Chr12:108574697 Evl within coordinates of
Tssr114988 1495 bp downstream
 SNP C/G G G G G C G G G G G C G G G G G G G C C G C G G G G C C G G G G C C G G G G G C G G G G G G G C G G G G
rs222383827
MGI SNP Detail		 Chr12:108574701 Evl within coordinates of
Tssr114988 1499 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237926651
MGI SNP Detail		 Chr12:108574744 Evl within coordinates of
Tssr114988 1542 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255939171
MGI SNP Detail		 Chr12:108574873 Evl within coordinates of
Tssr114988 1671 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229137694
MGI SNP Detail		 Chr12:108574977 Evl within coordinates of
Tssr114988 1775 bp downstream
 SNP A/G A A A A G A A A A A G G A A A A A A A G G A G A A A A G G A A A A G G A A A A A G A A A A A A A G A A A A
rs241947178
MGI SNP Detail		 Chr12:108575057 Evl within coordinates of
Tssr114988 1855 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs259908040
MGI SNP Detail		 Chr12:108575063 Evl within coordinates of
Tssr114988 1861 bp downstream
 SNP C/T T T T T C T T T T T C C T T T T T T T C C T C T T T T C C T T T T C C T T T T T C T T T T T T T T T T T T
rs233136571
MGI SNP Detail		 Chr12:108575067 Evl within coordinates of
Tssr114988 1865 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs252390545
MGI SNP Detail		 Chr12:108575160 Evl within coordinates of
Tssr114988 1958 bp downstream
 SNP A/T A A A A T A A A A A T T A A A A A A A T T A T A A A A T T A A A A T T A A A A A T A A A A A A A T A A A A
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Showing SNP(s) 1 - 67 of 67
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory