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Mouse SNP Summary
Symbol
Name
ID 		Tssr115455
transcription start site region 115455
MGI:6043222

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231944920
MGI SNP Detail		 Chr12:112976193 Tssr115455 1986 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs6406827
MGI SNP Detail		 Chr12:112976284 Tssr115455 1895 bp upstream
 SNP A/G A A G A A A A G A A A A A A G G G G A A G G A A G G A G A A A A G G G G G G G A G G A G G G G G G
rs242076831
MGI SNP Detail		 Chr12:112976315 Tssr115455 1864 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241967879
MGI SNP Detail		 Chr12:112976484 Tssr115455 1695 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs585333455
MGI SNP Detail		 Chr12:112976507 Tssr115455 1672 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs6161589
MGI SNP Detail		 Chr12:112976829 Tssr115455 1350 bp upstream
 SNP C/T T T C T T T C T C C T C C C T T C C C C
rs224227133
MGI SNP Detail		 Chr12:112976872 Tssr115455 1307 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238610813
MGI SNP Detail		 Chr12:112976972 Gm61130 within coordinates of
Tssr115455 1207 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251293029
MGI SNP Detail		 Chr12:112976973 Gm61130 within coordinates of
Tssr115455 1206 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220321376
MGI SNP Detail		 Chr12:112977083 Gm61130 within coordinates of
Tssr115455 1096 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237246380
MGI SNP Detail		 Chr12:112977101 Gm61130 within coordinates of
Tssr115455 1078 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs256975608
MGI SNP Detail		 Chr12:112977250 Gm61130 within coordinates of
Tssr115455 929 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs29154639
MGI SNP Detail		 Chr12:112977276 Gm61130 within coordinates of
Tssr115455 903 bp upstream
 SNP A/G G G A G G G A G G G A A A G G A A A A
rs251800343
MGI SNP Detail		 Chr12:112977406 Cpgi5198 within coordinates of
Gm61130 within coordinates of
Tssr115455 773 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263293116
MGI SNP Detail		 Chr12:112977407 Cpgi5198 within coordinates of
Gm61130 within coordinates of
Tssr115455 772 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs29144173
MGI SNP Detail		 Chr12:112977507 Cpgi5198 within coordinates of
Gm61130 within coordinates of
Tssr115455 672 bp upstream
 SNP C/G G G C G G G C G C G C C C G G C C C C
rs387242390
MGI SNP Detail		 Chr12:112977657 Cpgi5198 within coordinates of
Gm61130 within coordinates of
Tssr115455 522 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C T C C T T C C
rs244150172
MGI SNP Detail		 Chr12:112977697 Cpgi5198 within coordinates of
Gm61130 within coordinates of
Tssr115455 482 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs255089464
MGI SNP Detail		 Chr12:112977837 Cpgi5198 within coordinates of
Gm61130 within coordinates of
Tssr115455 342 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29122738
MGI SNP Detail		 Chr12:112977843 Cpgi5198 within coordinates of
Gm61130 within coordinates of
Tssr115455 336 bp upstream
 SNP C/T T C C T C
rs241990529
MGI SNP Detail		 Chr12:112977987 Cpgi5198 within coordinates of
Tssr115455 192 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs213027985
MGI SNP Detail		 Chr12:112978004 Cpgi5198 within coordinates of
Tssr115455 175 bp upstream
 SNP G/T T T T T T T T T T T T T T T G T T T T T T T T T T T T T G T T T T T T T T T T
rs239259204
MGI SNP Detail		 Chr12:112978479 Cpgi5198 within coordinates of
Pacs2 within coordinates of
Tssr115455 291 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs260027435
MGI SNP Detail		 Chr12:112978493 Cpgi5198 within coordinates of
Pacs2 within coordinates of
Tssr115455 305 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs215478601
MGI SNP Detail		 Chr12:112978593 Cpgi5198 within coordinates of
Pacs2 within coordinates of
Tssr115455 405 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234774721
MGI SNP Detail		 Chr12:112978652 Cpgi5198 within coordinates of
Pacs2 within coordinates of
Tssr115455 464 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs254002097
MGI SNP Detail		 Chr12:112978662 Cpgi5198 within coordinates of
Pacs2 within coordinates of
Tssr115455 474 bp downstream
 SNP G G G
rs214358818
MGI SNP Detail		 Chr12:112978674 Cpgi5198 within coordinates of
Pacs2 within coordinates of
Tssr115455 486 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs229984944
MGI SNP Detail		 Chr12:112978784 Cpgi5198 within coordinates of
Pacs2 within coordinates of
Tssr115455 596 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A G A A A A A A A A A A G A A A A A A A G A A A
rs250518673
MGI SNP Detail		 Chr12:112978793 Cpgi5198 within coordinates of
Pacs2 within coordinates of
Tssr115455 605 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579494382
MGI SNP Detail		 Chr12:112978804 Cpgi5198 within coordinates of
Pacs2 within coordinates of
Tssr115455 616 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226402513
MGI SNP Detail		 Chr12:112978853 Pacs2 within coordinates of
Tssr115455 665 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs33858038
MGI SNP Detail		 Chr12:112979054 Pacs2 within coordinates of
Tssr115455 866 bp downstream
 SNP A/G A G A A G G
rs33847455
MGI SNP Detail		 Chr12:112979058 Pacs2 within coordinates of
Tssr115455 870 bp downstream
 SNP A/T T A T T A A
rs225211069
MGI SNP Detail		 Chr12:112979068 Pacs2 within coordinates of
Tssr115455 880 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237833963
MGI SNP Detail		 Chr12:112979140 Pacs2 within coordinates of
Tssr115455 952 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256786452
MGI SNP Detail		 Chr12:112979235 Pacs2 within coordinates of
Tssr115455 1047 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223837411
MGI SNP Detail		 Chr12:112979287 Pacs2 within coordinates of
Tssr115455 1099 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs235637592
MGI SNP Detail		 Chr12:112979291 Pacs2 within coordinates of
Tssr115455 1103 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs29208930
MGI SNP Detail		 Chr12:112979307 Pacs2 within coordinates of
Tssr115455 1119 bp downstream
 SNP A/C C A A C C
rs233806866
MGI SNP Detail		 Chr12:112979313 Pacs2 within coordinates of
Tssr115455 1125 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs254456174
MGI SNP Detail		 Chr12:112979341 Pacs2 within coordinates of
Tssr115455 1153 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs29207162
MGI SNP Detail		 Chr12:112979372 Pacs2 within coordinates of
Tssr115455 1184 bp downstream
 SNP A/T T A A
rs228033741
MGI SNP Detail		 Chr12:112979400 Pacs2 within coordinates of
Tssr115455 1212 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs582278604
MGI SNP Detail		 Chr12:112979436 Pacs2 within coordinates of
Tssr115455 1248 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs244868266
MGI SNP Detail		 Chr12:112979450 Pacs2 within coordinates of
Tssr115455 1262 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs585477718
MGI SNP Detail		 Chr12:112979494 Pacs2 within coordinates of
Tssr115455 1306 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214417802
MGI SNP Detail		 Chr12:112979604 Pacs2 within coordinates of
Tssr115455 1416 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs579741709
MGI SNP Detail		 Chr12:112979632 Pacs2 within coordinates of
Tssr115455 1444 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229843177
MGI SNP Detail		 Chr12:112979732 Pacs2 within coordinates of
Tssr115455 1544 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29164757
MGI SNP Detail		 Chr12:112979749 Pacs2 within coordinates of
Tssr115455 1561 bp downstream
 SNP A/G G A G G A A
rs218078615
MGI SNP Detail		 Chr12:112979859 Pacs2 within coordinates of
Tssr115455 1671 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs243294163
MGI SNP Detail		 Chr12:112979946 Pacs2 within coordinates of
Tssr115455 1758 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs258842598
MGI SNP Detail		 Chr12:112980044 Pacs2 within coordinates of
Tssr115455 1856 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221542925
MGI SNP Detail		 Chr12:112980067 Pacs2 within coordinates of
Tssr115455 1879 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs107623500
MGI SNP Detail		 Chr12:112980084 Pacs2 within coordinates of
Tssr115455 1896 bp downstream
 SNP G/T G G T T
rs583761620
MGI SNP Detail		 Chr12:112980129 Pacs2 within coordinates of
Tssr115455 1941 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs107939203
MGI SNP Detail		 Chr12:112980131 Pacs2 within coordinates of
Tssr115455 1943 bp downstream
 SNP A/G G G G A
rs108465850
MGI SNP Detail		 Chr12:112980138 Pacs2 within coordinates of
Tssr115455 1950 bp downstream
 SNP C/G G G G C
rs586735242
MGI SNP Detail		 Chr12:112980171 Pacs2 within coordinates of
Tssr115455 1983 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C
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Showing SNP(s) 1 - 60 of 60
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory