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Mouse SNP Summary
Symbol
Name
ID 		Tssr115641
transcription start site region 115641
MGI:6043408

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs246581355
MGI SNP Detail		 Chr12:4641795 Gm3625 within coordinates of
Tssr115641 1981 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs214540073
MGI SNP Detail		 Chr12:4641803 Gm3625 within coordinates of
Tssr115641 1973 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C T T
rs231991014
MGI SNP Detail		 Chr12:4641805 Gm3625 within coordinates of
Tssr115641 1971 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251070246
MGI SNP Detail		 Chr12:4641852 Gm3625 within coordinates of
Tssr115641 1924 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220969900
MGI SNP Detail		 Chr12:4641872 Gm3625 within coordinates of
Tssr115641 1904 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs234646987
MGI SNP Detail		 Chr12:4641908 Gm3625 within coordinates of
Tssr115641 1868 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T C C
rs264222797
MGI SNP Detail		 Chr12:4641972 Gm3625 within coordinates of
Tssr115641 1804 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs225746157
MGI SNP Detail		 Chr12:4641979 Gm3625 within coordinates of
Tssr115641 1797 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs239672734
MGI SNP Detail		 Chr12:4642010 Gm3625 within coordinates of
Rr256467 within coordinates of
Tssr115641 1766 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs582915405
MGI SNP Detail		 Chr12:4642024 Gm3625 within coordinates of
Rr256467 within coordinates of
Tssr115641 1752 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs586315464
MGI SNP Detail		 Chr12:4642031 Gm3625 within coordinates of
Rr256467 within coordinates of
Tssr115641 1745 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs579079290
MGI SNP Detail		 Chr12:4642048 Gm3625 within coordinates of
Rr256467 within coordinates of
Tssr115641 1728 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250934688
MGI SNP Detail		 Chr12:4642068 Gm3625 within coordinates of
Rr256467 within coordinates of
Tssr115641 1708 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T
rs219833867
MGI SNP Detail		 Chr12:4642070 Gm3625 within coordinates of
Rr256467 within coordinates of
Tssr115641 1706 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs237327943
MGI SNP Detail		 Chr12:4642072 Gm3625 within coordinates of
Rr256467 within coordinates of
Tssr115641 1704 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs262082470
MGI SNP Detail		 Chr12:4642096 Gm3625 within coordinates of
Rr256467 within coordinates of
Tssr115641 1680 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs241290277
MGI SNP Detail		 Chr12:4642112 Gm3625 within coordinates of
Rr256467 within coordinates of
Tssr115641 1664 bp downstream
 SNP C/T C T
rs248736906
MGI SNP Detail		 Chr12:4642117 Gm3625 within coordinates of
Rr256467 within coordinates of
Tssr115641 1659 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs266015431
MGI SNP Detail		 Chr12:4642236 Gm3625 within coordinates of
Rr265387 within coordinates of
Tssr115641 1540 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs228324628
MGI SNP Detail		 Chr12:4642272 Gm3625 within coordinates of
Rr265387 within coordinates of
Tssr115641 1504 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs246509050
MGI SNP Detail		 Chr12:4642380 Gm3625 within coordinates of
Rr265387 within coordinates of
Tssr115641 1396 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs582610419
MGI SNP Detail		 Chr12:4642417 Gm3625 within coordinates of
Rr265387 within coordinates of
Tssr115641 1359 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs586004804
MGI SNP Detail		 Chr12:4642418 Gm3625 within coordinates of
Rr265387 within coordinates of
Tssr115641 1358 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs579961661
MGI SNP Detail		 Chr12:4642419 Gm3625 within coordinates of
Rr265387 within coordinates of
Tssr115641 1357 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs583090249
MGI SNP Detail		 Chr12:4642420 Gm3625 within coordinates of
Rr265387 within coordinates of
Tssr115641 1356 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs585566340
MGI SNP Detail		 Chr12:4642425 Gm3625 within coordinates of
Rr265387 within coordinates of
Tssr115641 1351 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C
rs579531065
MGI SNP Detail		 Chr12:4642429 Gm3625 within coordinates of
Rr265387 within coordinates of
Tssr115641 1347 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs584046330
MGI SNP Detail		 Chr12:4642431 Gm3625 within coordinates of
Rr265387 within coordinates of
Tssr115641 1345 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C C C C C C C G C C C C C C C C C C C
rs587566963
MGI SNP Detail		 Chr12:4642435 Gm3625 within coordinates of
Rr265387 within coordinates of
Tssr115641 1341 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs580379342
MGI SNP Detail		 Chr12:4642437 Gm3625 within coordinates of
Rr265387 within coordinates of
Tssr115641 1339 bp downstream
 SNP C/G/T T T T T T T T T T T T T T T T T T T T T T G T T T T G T C T T G T T C T T T G T T T T T T T T T C
rs583765117
MGI SNP Detail		 Chr12:4642461 Gm3625 within coordinates of
Rr265387 within coordinates of
Tssr115641 1315 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs214480696
MGI SNP Detail		 Chr12:4642504 Gm3625 within coordinates of
Rr265387 within coordinates of
Tssr115641 1272 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs225946190
MGI SNP Detail		 Chr12:4642543 Gm3625 within coordinates of
Rr265387 within coordinates of
Tssr115641 1233 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs254460586
MGI SNP Detail		 Chr12:4642629 Cpgi4378 within coordinates of
Gm3625 within coordinates of
Rr265387 within coordinates of
Tssr112557 within coordinates of
Tssr115641 1147 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs258755669
MGI SNP Detail		 Chr12:4642693 Cpgi4378 within coordinates of
Gm3625 within coordinates of
Rr265387 within coordinates of
Tssr115641 1083 bp downstream
 SNP A/G A G
rs212686423
MGI SNP Detail		 Chr12:4642765 Cpgi4378 within coordinates of
Gm3625 within coordinates of
Rr265387 within coordinates of
Tssr115641 1011 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236038016
MGI SNP Detail		 Chr12:4642806 Cpgi4378 within coordinates of
Gm3625 within coordinates of
Itsn2 within coordinates of
Rr265387 within coordinates of
Tssr112559 within coordinates of
Tssr115641 970 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G A A
rs260804723
MGI SNP Detail		 Chr12:4642869 Cpgi4378 within coordinates of
Gm3625 within coordinates of
Itsn2 within coordinates of
Rr265387 within coordinates of
Tssr115641 907 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs218026959
MGI SNP Detail		 Chr12:4643166 Cpgi4378 within coordinates of
Gm3625 within coordinates of
Itsn2 within coordinates of
Rr265387 within coordinates of
Tssr115641 610 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250922947
MGI SNP Detail		 Chr12:4643386 Cpgi4378 within coordinates of
Gm3625 within coordinates of
Itsn2 within coordinates of
Rr265387 within coordinates of
Tssr115641 390 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227251709
MGI SNP Detail		 Chr12:4643483 Cpgi4378 within coordinates of
Gm3625 within coordinates of
Itsn2 within coordinates of
Rr265387 within coordinates of
Tssr115641 293 bp downstream
 SNP C/T T C
rs241541908
MGI SNP Detail		 Chr12:4643723 Cpgi4378 within coordinates of
Gm3625 within coordinates of
Itsn2 within coordinates of
Rr265387 within coordinates of
Tssr115639 within coordinates of
Tssr115641 53 bp downstream
 SNP T T T
rs261398667
MGI SNP Detail		 Chr12:4643876 Cpgi4378 within coordinates of
Itsn2 within coordinates of
Rr265387 within coordinates of
Tssr115641 86 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252587292
MGI SNP Detail		 Chr12:4643904 Cpgi4378 within coordinates of
Itsn2 within coordinates of
Rr265387 within coordinates of
Tssr115641 114 bp upstream
 SNP G G G
rs251711452
MGI SNP Detail		 Chr12:4643929 Itsn2 within coordinates of
Rr265387 within coordinates of
Tssr115641 139 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264163784
MGI SNP Detail		 Chr12:4643992 Itsn2 within coordinates of
Rr265387 within coordinates of
Tssr115641 202 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
rs228287820
MGI SNP Detail		 Chr12:4644034 Itsn2 within coordinates of
Rr265387 within coordinates of
Tssr115641 244 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs240929374
MGI SNP Detail		 Chr12:4644038 Itsn2 within coordinates of
Rr265387 within coordinates of
Tssr115641 248 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs258403660
MGI SNP Detail		 Chr12:4644043 Itsn2 within coordinates of
Rr265387 within coordinates of
Tssr115641 253 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs225876769
MGI SNP Detail		 Chr12:4644113 Itsn2 within coordinates of
Rr265387 within coordinates of
Tssr115641 323 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs249981901
MGI SNP Detail		 Chr12:4644114 Itsn2 within coordinates of
Rr265387 within coordinates of
Tssr115641 324 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs212430937
MGI SNP Detail		 Chr12:4644127 Itsn2 within coordinates of
Rr265387 within coordinates of
Tssr115641 337 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218563359
MGI SNP Detail		 Chr12:4644235 Itsn2 within coordinates of
Rr265387 within coordinates of
Tssr115641 445 bp upstream
 SNP C/T T C
rs235742078
MGI SNP Detail		 Chr12:4644248 Itsn2 within coordinates of
Rr265387 within coordinates of
Tssr115641 458 bp upstream
 SNP A/G A G
rs265245715
MGI SNP Detail		 Chr12:4644316 Itsn2 within coordinates of
Rr265387 within coordinates of
Tssr115641 526 bp upstream
 SNP A A A
rs233546614
MGI SNP Detail		 Chr12:4644325 Itsn2 within coordinates of
Rr265387 within coordinates of
Tssr115641 535 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs251228278
MGI SNP Detail		 Chr12:4644437 Itsn2 within coordinates of
Rr265387 within coordinates of
Tssr115641 647 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs46604446
MGI SNP Detail		 Chr12:4644480 Itsn2 within coordinates of
Rr265387 within coordinates of
Tssr115641 690 bp upstream
 SNP C/T C C C C C C C C C T C T C
rs51146695
MGI SNP Detail		 Chr12:4644514 Itsn2 within coordinates of
Rr265387 within coordinates of
Tssr115641 724 bp upstream
 SNP A/G G G G G G G G G G A G G A G
rs255973000
MGI SNP Detail		 Chr12:4644534 Itsn2 within coordinates of
Rr265387 within coordinates of
Tssr115641 744 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219769047
MGI SNP Detail		 Chr12:4644566 Itsn2 within coordinates of
Rr265387 within coordinates of
Tssr115641 776 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs240092250
MGI SNP Detail		 Chr12:4644588 Itsn2 within coordinates of
Rr265387 within coordinates of
Tssr115641 798 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs229638341
MGI SNP Detail		 Chr12:4644796 Itsn2 within coordinates of
Tssr115641 1006 bp upstream
 SNP C C C
rs222179522
MGI SNP Detail		 Chr12:4644800 Itsn2 within coordinates of
Tssr115641 1010 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs45703356
MGI SNP Detail		 Chr12:4644880 Itsn2 within coordinates of
Tssr115641 1090 bp upstream
 SNP G/T T T T T T T T T T G T G
rs581131176
MGI SNP Detail		 Chr12:4644884 Itsn2 within coordinates of
Tssr115641 1094 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs584312626
MGI SNP Detail		 Chr12:4644960 Itsn2 within coordinates of
Tssr115641 1170 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A
rs586727481
MGI SNP Detail		 Chr12:4644961 Itsn2 within coordinates of
Tssr115641 1171 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T
rs580615481
MGI SNP Detail		 Chr12:4644964 Itsn2 within coordinates of
Tssr115641 1174 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T
rs584236852
MGI SNP Detail		 Chr12:4644965 Itsn2 within coordinates of
Tssr115641 1175 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs248642586
MGI SNP Detail		 Chr12:4644979 Itsn2 within coordinates of
Tssr115641 1189 bp upstream
 SNP C/G G C
rs258659533
MGI SNP Detail		 Chr12:4645070 Itsn2 within coordinates of
Tssr115641 1280 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219904146
MGI SNP Detail		 Chr12:4645092 Itsn2 within coordinates of
Tssr115641 1302 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs263039226
MGI SNP Detail		 Chr12:4645195 Itsn2 within coordinates of
Tssr115641 1405 bp upstream
 SNP C/T C T
rs245068369
MGI SNP Detail		 Chr12:4645222 Itsn2 within coordinates of
Tssr115641 1432 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs261567305
MGI SNP Detail		 Chr12:4645297 Itsn2 within coordinates of
Tssr115641 1507 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs582735605
MGI SNP Detail		 Chr12:4645309 Itsn2 within coordinates of
Tssr115641 1519 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs235140009
MGI SNP Detail		 Chr12:4645333 Itsn2 within coordinates of
Tssr115641 1543 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs234542884
MGI SNP Detail		 Chr12:4645356 Gm48678 within coordinates of
Itsn2 within coordinates of
Tssr115641 1566 bp upstream
 SNP A/C A C
rs46211108
MGI SNP Detail		 Chr12:4645379 Gm48678 within coordinates of
Itsn2 within coordinates of
Tssr115641 1589 bp upstream
 SNP A/G A A A A A A A A A A A G A
rs51415856
MGI SNP Detail		 Chr12:4645434 Gm48678 within coordinates of
Itsn2 within coordinates of
Tssr115641 1644 bp upstream
 SNP A/G A A A A A A A A A G A G
rs48457640
MGI SNP Detail		 Chr12:4645504 Gm48678 within coordinates of
Itsn2 within coordinates of
Tssr115641 1714 bp upstream
 SNP A/T T T T T T T A T T A T A
rs45706248
MGI SNP Detail		 Chr12:4645550 Gm48678 within coordinates of
Itsn2 within coordinates of
Tssr115641 1760 bp upstream
 SNP C/T T T T T T T T T C T T C T
rs47400293
MGI SNP Detail		 Chr12:4645564 Gm48678 within coordinates of
Itsn2 within coordinates of
Tssr115641 1774 bp upstream
 SNP A/G G G G G G G A G G A A G G A G
rs236194739
MGI SNP Detail		 Chr12:4645596 Gm48678 within coordinates of
Itsn2 within coordinates of
Tssr115641 1806 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G T G G G T G G G G G G G T G G G G
rs51470393
MGI SNP Detail		 Chr12:4645600 Gm48678 within coordinates of
Itsn2 within coordinates of
Tssr115641 1810 bp upstream
 SNP A/T A A T A A A T A A T A T T
rs253504670
MGI SNP Detail		 Chr12:4645602 Gm48678 within coordinates of
Itsn2 within coordinates of
Tssr115641 1812 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G A G G G G
rs211784772
MGI SNP Detail		 Chr12:4645623 Gm48678 within coordinates of
Itsn2 within coordinates of
Tssr115641 1833 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G C G G G G G G G G G G G G G C
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Showing SNP(s) 1 - 88 of 88
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory