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Mouse SNP Summary
Symbol
Name
ID 		Tssr116530
transcription start site region 116530
MGI:6044297

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs247792534
MGI SNP Detail		 Chr12:69835380 Cdkl1 within coordinates of
Tssr116530 1999 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs212354690
MGI SNP Detail		 Chr12:69835389 Cdkl1 within coordinates of
Tssr116530 1990 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36411800
MGI SNP Detail		 Chr12:69835416 Cdkl1 within coordinates of
Tssr116530 1963 bp downstream
 SNP A/C A A A A A A C A A A A A A
rs257325213
MGI SNP Detail		 Chr12:69835452 Cdkl1 within coordinates of
Tssr116530 1927 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36293227
MGI SNP Detail		 Chr12:69835502 Cdkl1 within coordinates of
Tssr116530 1877 bp downstream
 SNP A/C C C A A A C A A A C A C
rs50134290
MGI SNP Detail		 Chr12:69835617 Cdkl1 within coordinates of
Tssr116530 1762 bp downstream
 SNP C/T T C C
rs46653766
MGI SNP Detail		 Chr12:69835630 Cdkl1 within coordinates of
Tssr116530 1749 bp downstream
 SNP C C C
rs222339031
MGI SNP Detail		 Chr12:69835647 Cdkl1 within coordinates of
Tssr116530 1732 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs242417689
MGI SNP Detail		 Chr12:69835660 Cdkl1 within coordinates of
Tssr116530 1719 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs49854096
MGI SNP Detail		 Chr12:69835696 Cdkl1 within coordinates of
Tssr116530 1683 bp downstream
 SNP C/T C T T
rs45739040
MGI SNP Detail		 Chr12:69835804 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 1575 bp downstream
 SNP A A A
rs582220640
MGI SNP Detail		 Chr12:69835829 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 1550 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221420568
MGI SNP Detail		 Chr12:69835871 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 1508 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs245849846
MGI SNP Detail		 Chr12:69835874 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 1505 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs50868087
MGI SNP Detail		 Chr12:69835926 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 1453 bp downstream
 SNP T T T
rs47019172
MGI SNP Detail		 Chr12:69835941 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 1438 bp downstream
 SNP G G G
rs239401208
MGI SNP Detail		 Chr12:69835955 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 1424 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs46890946
MGI SNP Detail		 Chr12:69835956 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 1423 bp downstream
 SNP A/G G A A
rs50011590
MGI SNP Detail		 Chr12:69835971 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 1408 bp downstream
 SNP A A A
rs47482321
MGI SNP Detail		 Chr12:69836002 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 1377 bp downstream
 SNP G/T T G G G
rs212749035
MGI SNP Detail		 Chr12:69836022 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 1357 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs229270511
MGI SNP Detail		 Chr12:69836066 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 1313 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs46135766
MGI SNP Detail		 Chr12:69836088 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 1291 bp downstream
 SNP C/T T C C C C T
rs215062419
MGI SNP Detail		 Chr12:69836101 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 1278 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233682880
MGI SNP Detail		 Chr12:69836125 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 1254 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs253407869
MGI SNP Detail		 Chr12:69836133 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 1246 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs216441095
MGI SNP Detail		 Chr12:69836136 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 1243 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs236077804
MGI SNP Detail		 Chr12:69836206 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 1173 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs255154298
MGI SNP Detail		 Chr12:69836264 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 1115 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221092833
MGI SNP Detail		 Chr12:69836310 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 1069 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs243098456
MGI SNP Detail		 Chr12:69836339 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 1040 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs584398844
MGI SNP Detail		 Chr12:69836422 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 957 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs578310269
MGI SNP Detail		 Chr12:69836423 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 956 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264107670
MGI SNP Detail		 Chr12:69836424 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 955 bp downstream
 SNP A/G A G
rs582662519
MGI SNP Detail		 Chr12:69836426 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 953 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs586194391
MGI SNP Detail		 Chr12:69836427 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 952 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580378251
MGI SNP Detail		 Chr12:69836428 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 951 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs52171906
MGI SNP Detail		 Chr12:69836445 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 934 bp downstream
 SNP C/T C C T
rs220644293
MGI SNP Detail		 Chr12:69836572 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 807 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239857703
MGI SNP Detail		 Chr12:69836621 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 758 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs258306422
MGI SNP Detail		 Chr12:69836648 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 731 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs228626015
MGI SNP Detail		 Chr12:69836737 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 642 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241661216
MGI SNP Detail		 Chr12:69837029 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116527 within coordinates of
Tssr116530 350 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs29198676
MGI SNP Detail		 Chr12:69837057 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116529 within coordinates of
Tssr116530 322 bp downstream
 SNP A/G A A G G A G G G G G G G G G G A A
rs229725776
MGI SNP Detail		 Chr12:69837115 Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 264 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs29176171
MGI SNP Detail		 Chr12:69837191 4930512B01Rik within coordinates of
Cdkl1 within coordinates of
Rr265514 within coordinates of
Tssr116530 188 bp downstream
 SNP A/C C C A C A C A A A A A A A A A C C
rs215576865
MGI SNP Detail		 Chr12:69837294 4930512B01Rik within coordinates of
Cdkl1 within coordinates of
Cpgi4702 within coordinates of
Rr265514 within coordinates of
Tssr116530 85 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227652351
MGI SNP Detail		 Chr12:69837314 4930512B01Rik within coordinates of
Cdkl1 within coordinates of
Cpgi4702 within coordinates of
Rr265514 within coordinates of
Tssr116530 65 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29137587
MGI SNP Detail		 Chr12:69837428 4930512B01Rik within coordinates of
Cdkl1 within coordinates of
Cpgi4702 within coordinates of
Rr265514 within coordinates of
Tssr116530 23 bp upstream
 SNP A/C C C C A C A C
rs216496437
MGI SNP Detail		 Chr12:69837439 4930512B01Rik within coordinates of
Cdkl1 within coordinates of
Cpgi4702 within coordinates of
Rr265514 within coordinates of
Tssr116530 34 bp upstream
Tssr116531 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236136520
MGI SNP Detail		 Chr12:69837479 4930512B01Rik within coordinates of
Cdkl1 within coordinates of
Cpgi4702 within coordinates of
Rr265514 within coordinates of
Tssr116530 74 bp upstream
Tssr116531 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252085141
MGI SNP Detail		 Chr12:69837503 4930512B01Rik within coordinates of
Cdkl1 within coordinates of
Cpgi4702 within coordinates of
Rr265514 within coordinates of
Tssr116530 98 bp upstream
Tssr116531 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212492372
MGI SNP Detail		 Chr12:69837539 4930512B01Rik within coordinates of
Cdkl1 within coordinates of
Cpgi4702 within coordinates of
Rr265514 within coordinates of
Tssr116530 134 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs230508602
MGI SNP Detail		 Chr12:69837571 4930512B01Rik within coordinates of
Cdkl1 within coordinates of
Cpgi4702 within coordinates of
Rr265514 within coordinates of
Tssr116530 166 bp upstream
 SNP C/G C G
rs244860886
MGI SNP Detail		 Chr12:69837572 4930512B01Rik within coordinates of
Cdkl1 within coordinates of
Cpgi4702 within coordinates of
Rr265514 within coordinates of
Tssr116530 167 bp upstream
 SNP C/T T C
rs237583665
MGI SNP Detail		 Chr12:69837604 4930512B01Rik within coordinates of
Cdkl1 within coordinates of
Cpgi4702 within coordinates of
Rr265514 within coordinates of
Tssr116530 199 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257848041
MGI SNP Detail		 Chr12:69837618 4930512B01Rik within coordinates of
Cdkl1 within coordinates of
Cpgi4702 within coordinates of
Rr265514 within coordinates of
Tssr116530 213 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs220701037
MGI SNP Detail		 Chr12:69837621 4930512B01Rik within coordinates of
Cdkl1 within coordinates of
Cpgi4702 within coordinates of
Rr265514 within coordinates of
Tssr116530 216 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233481318
MGI SNP Detail		 Chr12:69837694 4930512B01Rik within coordinates of
Cdkl1 within coordinates of
Cpgi4702 within coordinates of
Rr265514 within coordinates of
Tssr116530 289 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256867419
MGI SNP Detail		 Chr12:69837723 4930512B01Rik within coordinates of
Cdkl1 within coordinates of
Cpgi4702 within coordinates of
Rr265514 within coordinates of
Tssr116530 318 bp upstream
 SNP A/G A G
rs252523074
MGI SNP Detail		 Chr12:69837828 4930512B01Rik within coordinates of
Cdkl1 within coordinates of
Cpgi4702 within coordinates of
Rr265514 within coordinates of
Tssr116530 423 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs582617156
MGI SNP Detail		 Chr12:69837848 4930512B01Rik within coordinates of
Cdkl1 within coordinates of
Cpgi4702 within coordinates of
Rr265514 within coordinates of
Tssr116530 443 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
rs227266456
MGI SNP Detail		 Chr12:69837849 4930512B01Rik within coordinates of
Cdkl1 within coordinates of
Cpgi4702 within coordinates of
Rr265514 within coordinates of
Tssr116530 444 bp upstream
 SNP A/G A G
rs222130647
MGI SNP Detail		 Chr12:69837857 4930512B01Rik within coordinates of
Cdkl1 within coordinates of
Cpgi4702 within coordinates of
Rr265514 within coordinates of
Tssr116530 452 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs37681113
MGI SNP Detail		 Chr12:69837901 4930512B01Rik within coordinates of
Cdkl1 within coordinates of
Cpgi4702 within coordinates of
Rr265514 within coordinates of
Tssr116530 496 bp upstream
 SNP G/T T T T T T T T T T T G G T G T T
rs586120088
MGI SNP Detail		 Chr12:69838040 4930512B01Rik within coordinates of
Cdkl1 within coordinates of
Cpgi4702 within coordinates of
Rr265514 within coordinates of
Tssr116530 635 bp upstream
Tssr116532 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs264683791
MGI SNP Detail		 Chr12:69838041 4930512B01Rik within coordinates of
Cdkl1 within coordinates of
Cpgi4702 within coordinates of
Rr265514 within coordinates of
Tssr116530 636 bp upstream
Tssr116532 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs37128299
MGI SNP Detail		 Chr12:69838194 4930512B01Rik within coordinates of
Rr265514 within coordinates of
Tssr116530 789 bp upstream
 SNP A/G A A A A A A G A A A G A A A A A
rs246001855
MGI SNP Detail		 Chr12:69838279 4930512B01Rik within coordinates of
Rr265514 within coordinates of
Tssr116530 874 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs258711839
MGI SNP Detail		 Chr12:69838301 4930512B01Rik within coordinates of
Rr265514 within coordinates of
Tssr116530 896 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs227709211
MGI SNP Detail		 Chr12:69838314 4930512B01Rik within coordinates of
Rr265514 within coordinates of
Tssr116530 909 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs236102599
MGI SNP Detail		 Chr12:69838332 4930512B01Rik within coordinates of
Rr265514 within coordinates of
Tssr116530 927 bp upstream
 SNP A/T A T
rs249787798
MGI SNP Detail		 Chr12:69838340 4930512B01Rik within coordinates of
Rr265514 within coordinates of
Tssr116530 935 bp upstream
 SNP G/T T G
rs214006588
MGI SNP Detail		 Chr12:69838342 4930512B01Rik within coordinates of
Rr265514 within coordinates of
Tssr116530 937 bp upstream
 SNP G/T G T
rs248958666
MGI SNP Detail		 Chr12:69838390 4930512B01Rik within coordinates of
Rr265514 within coordinates of
Tssr116530 985 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212932068
MGI SNP Detail		 Chr12:69838397 4930512B01Rik within coordinates of
Rr265514 within coordinates of
Tssr116530 992 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs235886006
MGI SNP Detail		 Chr12:69838398 4930512B01Rik within coordinates of
Rr265514 within coordinates of
Tssr116530 993 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255834281
MGI SNP Detail		 Chr12:69838438 4930512B01Rik within coordinates of
Rr265514 within coordinates of
Tssr116530 1033 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs232808840
MGI SNP Detail		 Chr12:69838452 4930512B01Rik within coordinates of
Rr265514 within coordinates of
Tssr116530 1047 bp upstream
 SNP C/T C T
rs215188951
MGI SNP Detail		 Chr12:69838481 4930512B01Rik within coordinates of
Rr265514 within coordinates of
Tssr116530 1076 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233538469
MGI SNP Detail		 Chr12:69838502 4930512B01Rik within coordinates of
Rr265514 within coordinates of
Tssr116530 1097 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs252576267
MGI SNP Detail		 Chr12:69838522 4930512B01Rik within coordinates of
Rr265514 within coordinates of
Tssr116530 1117 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs222551018
MGI SNP Detail		 Chr12:69838525 4930512B01Rik within coordinates of
Rr265514 within coordinates of
Tssr116530 1120 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs236028854
MGI SNP Detail		 Chr12:69838528 4930512B01Rik within coordinates of
Rr265514 within coordinates of
Tssr116530 1123 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs255672606
MGI SNP Detail		 Chr12:69838534 4930512B01Rik within coordinates of
Rr265514 within coordinates of
Tssr116530 1129 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221264460
MGI SNP Detail		 Chr12:69838537 4930512B01Rik within coordinates of
Rr265514 within coordinates of
Tssr116530 1132 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs243260129
MGI SNP Detail		 Chr12:69838661 4930512B01Rik within coordinates of
Rr257091 within coordinates of
Tssr116530 1256 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258386266
MGI SNP Detail		 Chr12:69838671 4930512B01Rik within coordinates of
Rr257091 within coordinates of
Tssr116530 1266 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221426546
MGI SNP Detail		 Chr12:69838695 4930512B01Rik within coordinates of
Rr257091 within coordinates of
Tssr116530 1290 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs241600854
MGI SNP Detail		 Chr12:69838696 4930512B01Rik within coordinates of
Rr257091 within coordinates of
Tssr116530 1291 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs260894065
MGI SNP Detail		 Chr12:69838697 4930512B01Rik within coordinates of
Rr257091 within coordinates of
Tssr116530 1292 bp upstream
 SNP A/T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs234138431
MGI SNP Detail		 Chr12:69838723 4930512B01Rik within coordinates of
Rr257091 within coordinates of
Tssr116530 1318 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253107449
MGI SNP Detail		 Chr12:69838737 4930512B01Rik within coordinates of
Rr257091 within coordinates of
Tssr116530 1332 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs29184270
MGI SNP Detail		 Chr12:69838793 4930512B01Rik within coordinates of
Rr257091 within coordinates of
Tssr116530 1388 bp upstream
 SNP A/G G G A G A
rs29124533
MGI SNP Detail		 Chr12:69838797 4930512B01Rik within coordinates of
Rr257091 within coordinates of
Tssr116530 1392 bp upstream
 SNP C/T T T C T C
rs244303997
MGI SNP Detail		 Chr12:69838885 4930512B01Rik within coordinates of
Rr257091 within coordinates of
Tssr116530 1480 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214871584
MGI SNP Detail		 Chr12:69838944 4930512B01Rik within coordinates of
Rr257091 within coordinates of
Tssr116530 1539 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36424630
MGI SNP Detail		 Chr12:69838947 4930512B01Rik within coordinates of
Rr257091 within coordinates of
Tssr116530 1542 bp upstream
 SNP C/T C C C C C C C C C C C C C T C
rs29218150
MGI SNP Detail		 Chr12:69839023 4930512B01Rik within coordinates of
Tssr116530 1618 bp upstream
 SNP C/T T T C T T T
rs217276807
MGI SNP Detail		 Chr12:69839025 4930512B01Rik within coordinates of
Tssr116530 1620 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 100 of 111
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory