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Mouse SNP Summary
Symbol
Name
ID
Tssr116747
transcription start site region 116747
MGI:6044514

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs240997785
MGI SNP Detail
Chr12:76754813 Sptb within coordinates of
Tssr116747 1990 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs266095725
MGI SNP Detail
Chr12:76754815 Sptb within coordinates of
Tssr116747 1988 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs228544509
MGI SNP Detail
Chr12:76754827 Sptb within coordinates of
Tssr116747 1976 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247184878
MGI SNP Detail
Chr12:76754831 Sptb within coordinates of
Tssr116747 1972 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260036934
MGI SNP Detail
Chr12:76754871 Sptb within coordinates of
Tssr116747 1932 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227409444
MGI SNP Detail
Chr12:76754876 Sptb within coordinates of
Tssr116747 1927 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs256528612
MGI SNP Detail
Chr12:76754983 Sptb within coordinates of
Tssr116747 1820 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs213990851
MGI SNP Detail
Chr12:76755010 Sptb within coordinates of
Tssr116747 1793 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237382137
MGI SNP Detail
Chr12:76755021 Sptb within coordinates of
Tssr116747 1782 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs249383001
MGI SNP Detail
Chr12:76755174 Sptb within coordinates of
Tssr116747 1629 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217473666
MGI SNP Detail
Chr12:76755229 Sptb within coordinates of
Tssr116747 1574 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs32451219
MGI SNP Detail
Chr12:76755239 Sptb within coordinates of
Tssr116747 1564 bp downstream
SNP A/G G A A A G A G A A A A G A
rs579408222
MGI SNP Detail
Chr12:76755240 Sptb within coordinates of
Tssr116747 1563 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs582809520
MGI SNP Detail
Chr12:76755248 Sptb within coordinates of
Tssr116747 1555 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs252276853
MGI SNP Detail
Chr12:76755252 Sptb within coordinates of
Tssr116747 1551 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs214928172
MGI SNP Detail
Chr12:76755253 Sptb within coordinates of
Tssr116747 1550 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231825729
MGI SNP Detail
Chr12:76755429 Sptb within coordinates of
Tssr116747 1374 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs261907184
MGI SNP Detail
Chr12:76755502 Sptb within coordinates of
Tssr116747 1301 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs221222437
MGI SNP Detail
Chr12:76755513 Sptb within coordinates of
Tssr116747 1290 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs243699313
MGI SNP Detail
Chr12:76755537 Sptb within coordinates of
Tssr116747 1266 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260792730
MGI SNP Detail
Chr12:76755663 Sptb within coordinates of
Tssr116747 1140 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222502776
MGI SNP Detail
Chr12:76755678 Sptb within coordinates of
Tssr116747 1125 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241277313
MGI SNP Detail
Chr12:76755685 Sptb within coordinates of
Tssr116747 1118 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259044600
MGI SNP Detail
Chr12:76755714 Sptb within coordinates of
Tssr116747 1089 bp downstream
SNP A/G G G G A A A A A G A A A A A A A A A A A A A A A A A A A A A A G A A A A G G G A A G G A A A A A A A A A A
rs227455489
MGI SNP Detail
Chr12:76755886 Sptb within coordinates of
Tssr116747 917 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs244231243
MGI SNP Detail
Chr12:76756090 Sptb within coordinates of
Tssr116747 713 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs265083758
MGI SNP Detail
Chr12:76756134 Cpgi4785 within coordinates of
Sptb within coordinates of
Tssr116747 669 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs229013380
MGI SNP Detail
Chr12:76756143 Cpgi4785 within coordinates of
Sptb within coordinates of
Tssr116747 660 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252866541
MGI SNP Detail
Chr12:76756224 Cpgi4785 within coordinates of
Sptb within coordinates of
Tssr116747 579 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs217540983
MGI SNP Detail
Chr12:76756326 Cpgi4785 within coordinates of
Sptb within coordinates of
Tssr116747 477 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585638395
MGI SNP Detail
Chr12:76756344 Cpgi4785 within coordinates of
Sptb within coordinates of
Tssr116747 459 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs228749142
MGI SNP Detail
Chr12:76756385 Cpgi4785 within coordinates of
Sptb within coordinates of
Tssr116747 418 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs578384169
MGI SNP Detail
Chr12:76756426 Cpgi4785 within coordinates of
Sptb within coordinates of
Tssr116747 377 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246342499
MGI SNP Detail
Chr12:76756484 Cpgi4785 within coordinates of
Sptb within coordinates of
Tssr116747 319 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215538140
MGI SNP Detail
Chr12:76756533 Cpgi4785 within coordinates of
Sptb within coordinates of
Tssr116747 270 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs239395328
MGI SNP Detail
Chr12:76756664 Cpgi4785 within coordinates of
Sptb within coordinates of
Tssr116747 139 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs50376853
MGI SNP Detail
Chr12:76756733 Cpgi4785 within coordinates of
Sptb within coordinates of
Tssr116745 within coordinates of
Tssr116747 70 bp downstream
SNP C/T C T T T T T C T T T T T T T T T T C T T C T T C T C T T C T C T T C C C T C C C T T T T T C T C C C
rs212794276
MGI SNP Detail
Chr12:76756738 Cpgi4785 within coordinates of
Sptb within coordinates of
Tssr116745 within coordinates of
Tssr116747 65 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs234458529
MGI SNP Detail
Chr12:76757049 Cpgi4785 within coordinates of
Sptb within coordinates of
Tssr116747 221 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs255030884
MGI SNP Detail
Chr12:76757153 Cpgi4785 within coordinates of
Sptb within coordinates of
Tssr116747 325 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs222567060
MGI SNP Detail
Chr12:76757293 Cpgi4785 within coordinates of
Sptb within coordinates of
Tssr116747 465 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241143086
MGI SNP Detail
Chr12:76757314 Cpgi4785 within coordinates of
Sptb within coordinates of
Tssr116747 486 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29215423
MGI SNP Detail
Chr12:76757357 Cpgi4785 within coordinates of
Tssr116747 529 bp upstream
SNP C/T T C C
rs220275321
MGI SNP Detail
Chr12:76757494 Cpgi4785 within coordinates of
Tssr116747 666 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs245874481
MGI SNP Detail
Chr12:76757502 Cpgi4785 within coordinates of
Tssr116747 674 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs262410823
MGI SNP Detail
Chr12:76757503 Cpgi4785 within coordinates of
Tssr116747 675 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs229307745
MGI SNP Detail
Chr12:76757801 Tssr116747 973 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241482318
MGI SNP Detail
Chr12:76757951 Tssr116747 1123 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs29218397
MGI SNP Detail
Chr12:76758081 Tssr116747 1253 bp upstream
SNP G/T G G T T T
rs228785982
MGI SNP Detail
Chr12:76758085 Tssr116747 1257 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs246243387
MGI SNP Detail
Chr12:76758112 Tssr116747 1284 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs215426498
MGI SNP Detail
Chr12:76758118 Tssr116747 1290 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231265767
MGI SNP Detail
Chr12:76758304 Tssr116747 1476 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs255684365
MGI SNP Detail
Chr12:76758330 Tssr116747 1502 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs212540339
MGI SNP Detail
Chr12:76758336 Tssr116747 1508 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs235834285
MGI SNP Detail
Chr12:76758348 Tssr116747 1520 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs248605462
MGI SNP Detail
Chr12:76758456 Tssr116747 1628 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs387858030
MGI SNP Detail
Chr12:76758465 Tssr116747 1637 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A G A G
rs216488006
MGI SNP Detail
Chr12:76758470 Tssr116747 1642 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234524254
MGI SNP Detail
Chr12:76758475 Tssr116747 1647 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs252690738
MGI SNP Detail
Chr12:76758506 Tssr116747 1678 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs222942180
MGI SNP Detail
Chr12:76758535 Tssr116747 1707 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs236228237
MGI SNP Detail
Chr12:76758623 Tssr116747 1795 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs261523755
MGI SNP Detail
Chr12:76758628 Tssr116747 1800 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221702425
MGI SNP Detail
Chr12:76758710 Tssr116747 1882 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs244096356
MGI SNP Detail
Chr12:76758725 Tssr116747 1897 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G A A A
rs259912712
MGI SNP Detail
Chr12:76758814 Tssr116747 1986 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
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Showing SNP(s) 1 - 67 of 67

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory

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