About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Tssr117343
transcription start site region 117343
MGI:6045110

<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 120

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
SNP Density Heatmap
Chr12 from 100,980,381 bp to 100,984,407 bp
(4,027 bp)
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs235784209
MGI SNP Detail		 Chr12:100980402 Ccdc88c within coordinates of
Gm36756 within coordinates of
Rr369588 within coordinates of
Tssr117343 1979 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32966676
MGI SNP Detail		 Chr12:100980408 Ccdc88c within coordinates of
Gm36756 within coordinates of
Rr369588 within coordinates of
Tssr117343 1973 bp downstream
 SNP C/T C C C C C T C C C T C C T C
rs32966679
MGI SNP Detail		 Chr12:100980422 Ccdc88c within coordinates of
Gm36756 within coordinates of
Rr369588 within coordinates of
Tssr117343 1959 bp downstream
 SNP C/T C C C C C C C C C C T C C T C
rs229397195
MGI SNP Detail		 Chr12:100980439 Ccdc88c within coordinates of
Gm36756 within coordinates of
Rr369588 within coordinates of
Tssr117343 1942 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32966682
MGI SNP Detail		 Chr12:100980462 Ccdc88c within coordinates of
Gm36756 within coordinates of
Rr369588 within coordinates of
Tssr117343 1919 bp downstream
 SNP C/T T T T T T T C T T T T T T T T
rs32967434
MGI SNP Detail		 Chr12:100980532 Ccdc88c within coordinates of
Gm36756 within coordinates of
Rr369588 within coordinates of
Tssr117343 1849 bp downstream
 SNP C/T C C C C C C C C C C T C C T C
rs234549531
MGI SNP Detail		 Chr12:100980537 Ccdc88c within coordinates of
Gm36756 within coordinates of
Rr369588 within coordinates of
Tssr117343 1844 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32967437
MGI SNP Detail		 Chr12:100980549 Ccdc88c within coordinates of
Gm36756 within coordinates of
Rr369588 within coordinates of
Tssr117343 1832 bp downstream
 SNP C/T C C C C C C T C C C C C C C C
rs217280751
MGI SNP Detail		 Chr12:100980657 Ccdc88c within coordinates of
Gm36756 within coordinates of
Rr369588 within coordinates of
Tssr117343 1724 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs236222366
MGI SNP Detail		 Chr12:100980658 Ccdc88c within coordinates of
Gm36756 within coordinates of
Rr369588 within coordinates of
Tssr117343 1723 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs256220710
MGI SNP Detail		 Chr12:100980666 Ccdc88c within coordinates of
Gm36756 within coordinates of
Rr369588 within coordinates of
Tssr117343 1715 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs221205505
MGI SNP Detail		 Chr12:100980682 Ccdc88c within coordinates of
Gm36756 within coordinates of
Rr369588 within coordinates of
Tssr117343 1699 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs32967440
MGI SNP Detail		 Chr12:100980695 Ccdc88c within coordinates of
Gm36756 within coordinates of
Rr369588 within coordinates of
Tssr117343 1686 bp downstream
 SNP G/T G G G G G G T G G G T G G T G
rs250552878
MGI SNP Detail		 Chr12:100980701 Ccdc88c within coordinates of
Gm36756 within coordinates of
Rr369588 within coordinates of
Tssr117343 1680 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29193594
MGI SNP Detail		 Chr12:100980724 Ccdc88c within coordinates of
Gm36756 within coordinates of
Rr369588 within coordinates of
Tssr117343 1657 bp downstream
 SNP A/C C A C C A A C C C A C C C C C C
rs240195298
MGI SNP Detail		 Chr12:100980837 Ccdc88c within coordinates of
Gm36756 within coordinates of
Rr369588 within coordinates of
Tssr117343 1544 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259357879
MGI SNP Detail		 Chr12:100981036 Ccdc88c within coordinates of
Gm36756 within coordinates of
Rr369588 within coordinates of
Tssr117343 1345 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227004462
MGI SNP Detail		 Chr12:100981060 Ccdc88c within coordinates of
Gm36756 within coordinates of
Rr369588 within coordinates of
Tssr117343 1321 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs244512100
MGI SNP Detail		 Chr12:100981064 Ccdc88c within coordinates of
Gm36756 within coordinates of
Rr369588 within coordinates of
Tssr117343 1317 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs262130694
MGI SNP Detail		 Chr12:100981066 Ccdc88c within coordinates of
Gm36756 within coordinates of
Rr369588 within coordinates of
Tssr117343 1315 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs229808609
MGI SNP Detail		 Chr12:100981067 Ccdc88c within coordinates of
Gm36756 within coordinates of
Rr369588 within coordinates of
Tssr117343 1314 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs239429044
MGI SNP Detail		 Chr12:100981085 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 1296 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs258775611
MGI SNP Detail		 Chr12:100981092 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 1289 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227936297
MGI SNP Detail		 Chr12:100981107 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 1274 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247765009
MGI SNP Detail		 Chr12:100981168 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 1213 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32968244
MGI SNP Detail		 Chr12:100981191 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 1190 bp downstream
 SNP C/T T T C C C C T T C C T C T C
rs227472107
MGI SNP Detail		 Chr12:100981271 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 1110 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs254182561
MGI SNP Detail		 Chr12:100981336 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 1045 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213674722
MGI SNP Detail		 Chr12:100981441 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 940 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238973355
MGI SNP Detail		 Chr12:100981506 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 875 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250591372
MGI SNP Detail		 Chr12:100981507 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 874 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32968247
MGI SNP Detail		 Chr12:100981512 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 869 bp downstream
 SNP C/T C C C C C C T C C C C C C C C
rs233750182
MGI SNP Detail		 Chr12:100981523 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 858 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs252727482
MGI SNP Detail		 Chr12:100981559 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 822 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs32968249
MGI SNP Detail		 Chr12:100981573 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 808 bp downstream
 SNP A/G A A A A A A G A G A
rs241488844
MGI SNP Detail		 Chr12:100981575 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 806 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs585882218
MGI SNP Detail		 Chr12:100981582 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 799 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs261711734
MGI SNP Detail		 Chr12:100981590 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 791 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs32968252
MGI SNP Detail		 Chr12:100981631 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 750 bp downstream
 SNP A/C C C C C C C A C C C C C C C C
rs240080995
MGI SNP Detail		 Chr12:100981648 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 733 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258810789
MGI SNP Detail		 Chr12:100981674 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 707 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227794062
MGI SNP Detail		 Chr12:100981686 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 695 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs241802465
MGI SNP Detail		 Chr12:100981697 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 684 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs579809538
MGI SNP Detail		 Chr12:100981727 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 654 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs264289596
MGI SNP Detail		 Chr12:100981776 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 605 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs583608290
MGI SNP Detail		 Chr12:100981804 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 577 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585900946
MGI SNP Detail		 Chr12:100981865 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 516 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs227990465
MGI SNP Detail		 Chr12:100981957 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 424 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249811621
MGI SNP Detail		 Chr12:100981973 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 408 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs29187329
MGI SNP Detail		 Chr12:100981983 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 398 bp downstream
 SNP C/T C C T C C T T C C C C T C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32969007
MGI SNP Detail		 Chr12:100982070 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 311 bp downstream
 SNP C/T T T T T T C T T T T T T T
rs245220644
MGI SNP Detail		 Chr12:100982117 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 264 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs215277066
MGI SNP Detail		 Chr12:100982125 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 256 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233604353
MGI SNP Detail		 Chr12:100982227 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 154 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs252754186
MGI SNP Detail		 Chr12:100982230 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 151 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs219536498
MGI SNP Detail		 Chr12:100982247 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 134 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs32969008
MGI SNP Detail		 Chr12:100982261 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 120 bp downstream
 SNP C/T C C C C C C T C C C C C C C C
rs256597403
MGI SNP Detail		 Chr12:100982281 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 100 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs222444151
MGI SNP Detail		 Chr12:100982285 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 96 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs240119116
MGI SNP Detail		 Chr12:100982344 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 37 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs253189105
MGI SNP Detail		 Chr12:100982384 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221493282
MGI SNP Detail		 Chr12:100982392 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs29128608
MGI SNP Detail		 Chr12:100982461 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 54 bp upstream
 SNP A/G G G A G G A A G G G G A G G G G G A
rs266049272
MGI SNP Detail		 Chr12:100982598 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 191 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs32969012
MGI SNP Detail		 Chr12:100982665 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 258 bp upstream
 SNP A/G A A A A A G A A A A A A A
rs244733312
MGI SNP Detail		 Chr12:100982722 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 315 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs262320084
MGI SNP Detail		 Chr12:100982767 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 360 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs225924385
MGI SNP Detail		 Chr12:100982779 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 372 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245251192
MGI SNP Detail		 Chr12:100982781 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 374 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs258020035
MGI SNP Detail		 Chr12:100982821 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 414 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228380604
MGI SNP Detail		 Chr12:100982904 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 497 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247818855
MGI SNP Detail		 Chr12:100982948 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 541 bp upstream
 SNP G/T G T
rs32970045
MGI SNP Detail		 Chr12:100983035 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 628 bp upstream
 SNP A/G G G G G G G A G G G G G G G
rs219161967
MGI SNP Detail		 Chr12:100983063 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 656 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234879902
MGI SNP Detail		 Chr12:100983101 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 694 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254374773
MGI SNP Detail		 Chr12:100983118 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 711 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214159767
MGI SNP Detail		 Chr12:100983119 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 712 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233142035
MGI SNP Detail		 Chr12:100983126 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 719 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580414357
MGI SNP Detail		 Chr12:100983171 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 764 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253225447
MGI SNP Detail		 Chr12:100983184 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 777 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs222268237
MGI SNP Detail		 Chr12:100983186 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 779 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs235928840
MGI SNP Detail		 Chr12:100983259 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 852 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs260659215
MGI SNP Detail		 Chr12:100983264 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 857 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs219666228
MGI SNP Detail		 Chr12:100983314 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 907 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs241954708
MGI SNP Detail		 Chr12:100983317 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 910 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs265001436
MGI SNP Detail		 Chr12:100983380 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 973 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T
rs32970047
MGI SNP Detail		 Chr12:100983433 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 1026 bp upstream
 SNP C/T C C C C C C T C C C C C C C C
rs239151225
MGI SNP Detail		 Chr12:100983439 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 1032 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32970050
MGI SNP Detail		 Chr12:100983448 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 1041 bp upstream
 SNP A/C C C C C C C C C C A C C A C
rs228428573
MGI SNP Detail		 Chr12:100983452 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 1045 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs260127703
MGI SNP Detail		 Chr12:100983457 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 1050 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264473040
MGI SNP Detail		 Chr12:100983471 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 1064 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228229915
MGI SNP Detail		 Chr12:100983482 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 1075 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs250078328
MGI SNP Detail		 Chr12:100983525 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 1118 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs213774783
MGI SNP Detail		 Chr12:100983527 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 1120 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233062375
MGI SNP Detail		 Chr12:100983588 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 1181 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs246807886
MGI SNP Detail		 Chr12:100983600 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 1193 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs216158712
MGI SNP Detail		 Chr12:100983612 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 1205 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs583962496
MGI SNP Detail		 Chr12:100983663 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 1256 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs239900044
MGI SNP Detail		 Chr12:100983668 Ccdc88c within coordinates of
Rr369588 within coordinates of
Tssr117343 1261 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 120
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory