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Mouse SNP Summary
Symbol
Name
ID 		Tssr117531
transcription start site region 117531
MGI:6045298

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Showing SNP(s) 1 - 87 of 87

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs107893691
MGI SNP Detail		 Chr12:103829953 Rr471836 within coordinates of
Tssr117531 1978 bp downstream
 SNP G G
rs583144649
MGI SNP Detail		 Chr12:103829978 Rr471836 within coordinates of
Tssr117531 1953 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs585881206
MGI SNP Detail		 Chr12:103829990 Rr471836 within coordinates of
Tssr117531 1941 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs108209632
MGI SNP Detail		 Chr12:103830039 Rr471836 within coordinates of
Tssr117531 1892 bp downstream
 SNP C/T C T
rs580451013
MGI SNP Detail		 Chr12:103830052 Rr471836 within coordinates of
Tssr117531 1879 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs583341610
MGI SNP Detail		 Chr12:103830070 Rr471836 within coordinates of
Tssr117531 1861 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs587436575
MGI SNP Detail		 Chr12:103830114 Rr471836 within coordinates of
Tssr117531 1817 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs581024927
MGI SNP Detail		 Chr12:103830115 Rr471836 within coordinates of
Tssr117531 1816 bp downstream
 SNP G/T G G G T G T G G G G T T T T T T G G T G G G T G G G G T G G T G T T G G G T T G G G G G G G T G G G G G
rs583556705
MGI SNP Detail		 Chr12:103830124 Rr471836 within coordinates of
Tssr117531 1807 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs586145624
MGI SNP Detail		 Chr12:103830220 Rr471836 within coordinates of
Tssr117531 1711 bp downstream
 SNP C/T T C T T T T T T T T C T C T T C T T C T T C T
rs221850122
MGI SNP Detail		 Chr12:103830375 Tssr117531 1556 bp downstream
 SNP C/G C C C C C C C C C C G C C C C C C C C C C G
rs584280800
MGI SNP Detail		 Chr12:103830424 Tssr117531 1507 bp downstream
 SNP C C C C C C C C C C C C C C C C C C
rs579131392
MGI SNP Detail		 Chr12:103830429 Tssr117531 1502 bp downstream
 SNP A/T T T T T T T T T T A T T T T T T T T
rs262689498
MGI SNP Detail		 Chr12:103830436 Tssr117531 1495 bp downstream
 SNP C C C C C C C C C C C C C C C C C C
rs579079032
MGI SNP Detail		 Chr12:103830486 Tssr117531 1445 bp downstream
 SNP C C C C C C C C C C C C C C C C C C
rs582224979
MGI SNP Detail		 Chr12:103830510 Tssr117531 1421 bp downstream
 SNP A/G G A A A A A A A A A A A A A A A A A
rs50979173
MGI SNP Detail		 Chr12:103830571 Tssr117531 1360 bp downstream
 SNP A/G G A
rs46255341
MGI SNP Detail		 Chr12:103830582 Tssr117531 1349 bp downstream
 SNP C/T C T
rs51970527
MGI SNP Detail		 Chr12:103830583 Tssr117531 1348 bp downstream
 SNP G/T T G
rs585450212
MGI SNP Detail		 Chr12:103830591 Tssr117531 1340 bp downstream
 SNP A/C A A A A A A A A A C A A A A A C A A C A
rs261185058
MGI SNP Detail		 Chr12:103830595 Tssr117531 1336 bp downstream
 SNP C/T C C C C C C C C C T C C C C C T C C T C
rs45925464
MGI SNP Detail		 Chr12:103830609 Tssr117531 1322 bp downstream
 SNP C/T C T
rs108882619
MGI SNP Detail		 Chr12:103830638 Tssr117531 1293 bp downstream
 SNP C C
rs580359120
MGI SNP Detail		 Chr12:103830669 Tssr117531 1262 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G
rs51906003
MGI SNP Detail		 Chr12:103830931 Tssr117531 1000 bp downstream
 SNP C/T C T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs582891865
MGI SNP Detail		 Chr12:103830955 Tssr117531 976 bp downstream
 SNP C/G G G G G G G G G G C G G G G G G G G C
rs586105716
MGI SNP Detail		 Chr12:103831049 Tssr117531 882 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs48809719
MGI SNP Detail		 Chr12:103831068 Tssr117531 863 bp downstream
 SNP G G
rs48274883
MGI SNP Detail		 Chr12:103831091 Tssr117531 840 bp downstream
 SNP A/G G A G
rs580255924
MGI SNP Detail		 Chr12:103831155 Tssr117531 776 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C T
rs583817773
MGI SNP Detail		 Chr12:103831244 Tssr117531 687 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs586949694
MGI SNP Detail		 Chr12:103831257 Tssr117531 674 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs579856445
MGI SNP Detail		 Chr12:103831285 Tssr117531 646 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A
rs582914406
MGI SNP Detail		 Chr12:103831288 Tssr117531 643 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs46697114
MGI SNP Detail		 Chr12:103831301 Tssr117531 630 bp downstream
 SNP A/G G A G
rs581463114
MGI SNP Detail		 Chr12:103831311 Tssr117531 620 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs585306831
MGI SNP Detail		 Chr12:103831336 Tssr117531 595 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs587473023
MGI SNP Detail		 Chr12:103831435 Tssr117531 496 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs581306410
MGI SNP Detail		 Chr12:103831436 Tssr117531 495 bp downstream
 SNP G/T G G T G T G G G G T T T T T T G G T G G T G G G G T G T G T T G G G T T G G G G G G G T G G G G
rs584949743
MGI SNP Detail		 Chr12:103831439 Tssr117531 492 bp downstream
 SNP C/T T T C T C T T T T C C C C C C T T C T T C T T T T C T C T C C T T T C C T T T T T T T C T T T T
rs578558705
MGI SNP Detail		 Chr12:103831509 Tssr117531 422 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50202297
MGI SNP Detail		 Chr12:103831605 Tssr117531 326 bp downstream
 SNP C/T C T C
rs582326652
MGI SNP Detail		 Chr12:103831702 Tssr117531 229 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs584008973
MGI SNP Detail		 Chr12:103831740 Tssr117531 191 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A
rs578524543
MGI SNP Detail		 Chr12:103831776 Tssr117531 155 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs582568886
MGI SNP Detail		 Chr12:103831786 Tssr117531 145 bp downstream
 SNP C C C C C C C C C C C C C C C C C C
rs586358745
MGI SNP Detail		 Chr12:103831831 Tssr117531 100 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G
rs580504754
MGI SNP Detail		 Chr12:103831878 Tssr117531 53 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs582428807
MGI SNP Detail		 Chr12:103831887 Tssr117531 44 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs586305081
MGI SNP Detail		 Chr12:103831909 Tssr117531 22 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs579783525
MGI SNP Detail		 Chr12:103831912 Tssr117531 19 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs252212822
MGI SNP Detail		 Chr12:103831926 Tssr117531 5 bp downstream
 SNP C/T C C C T C T C C C C T T T T T T C C T C C T C C C C T C C T C T T C C C T T C C C C C C C T C C C C
rs583478744
MGI SNP Detail		 Chr12:103831930 Tssr117531 1 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs586198502
MGI SNP Detail		 Chr12:103831931 Tssr117531 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs49106693
MGI SNP Detail		 Chr12:103831943 Tssr117531 within coordinates of
 SNP C/T C T
rs583190724
MGI SNP Detail		 Chr12:103831967 Tssr117531 23 bp upstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs587341049
MGI SNP Detail		 Chr12:103831980 Tssr117531 36 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs587326139
MGI SNP Detail		 Chr12:103832009 Tssr117531 65 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs580893088
MGI SNP Detail		 Chr12:103832022 Tssr117531 78 bp upstream
Tssr117533 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs584620811
MGI SNP Detail		 Chr12:103832029 Tssr117531 85 bp upstream
Tssr117533 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs578747667
MGI SNP Detail		 Chr12:103832048 Tssr117531 104 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs581842910
MGI SNP Detail		 Chr12:103832064 Tssr117531 120 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T C T T T
rs584365897
MGI SNP Detail		 Chr12:103832169 Tssr117531 225 bp upstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs241916990
MGI SNP Detail		 Chr12:103832276 Tssr117531 332 bp upstream
 SNP A/T T T T A T A T T T T A A A A A A T T A T T A T T T T A T T A T A A T T T A A T T T T T T T A T T T T
rs252331166
MGI SNP Detail		 Chr12:103832301 Tssr117531 357 bp upstream
 SNP C/T C C C T C T C C C C T T T T T T C C T C C T C C C C T C C T C T T C C C T T C C C C C C C T C C C
rs387657441
MGI SNP Detail		 Chr12:103832317 Tssr117531 373 bp upstream
 SNP A/G G G A G A G G G G A A A A A A G G A G G A G G G G A G A G A A G G G A A G G G G G G G A G G G
rs582982414
MGI SNP Detail		 Chr12:103832336 Tssr117531 392 bp upstream
 SNP A/T A A A T A T T A A A A A A A A A A A T A A T A T A T A A A A T A A A A T T T T T T A A T A A
rs386839735
MGI SNP Detail		 Chr12:103832347 Tssr117531 403 bp upstream
 SNP C/G C C G C G C C C C G G G G G G C C G C C G C C C C G C G C G G C C C G G C C C C C C C G C C C
rs108492007
MGI SNP Detail		 Chr12:103832395 Tssr117531 451 bp upstream
 SNP C/T T C
rs108216381
MGI SNP Detail		 Chr12:103832410 Tssr117531 466 bp upstream
 SNP A/T A T
rs108688684
MGI SNP Detail		 Chr12:103832471 Tssr117531 527 bp upstream
 SNP G/T T G
rs108404984
MGI SNP Detail		 Chr12:103832498 Tssr117531 554 bp upstream
 SNP G/T T G
rs108746332
MGI SNP Detail		 Chr12:103832624 Tssr117531 680 bp upstream
 SNP C/T C T
rs582410052
MGI SNP Detail		 Chr12:103832673 Tssr117531 729 bp upstream
 SNP C/T T T T C T C T T T T C C C C C C T T C T T C T T T T C T T C T C C T T T C C T T T T T T T C T T T T
rs585631875
MGI SNP Detail		 Chr12:103832882 Tssr117531 938 bp upstream
 SNP A A A A A A A A A A A A A A A A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs579829092
MGI SNP Detail		 Chr12:103832999 Tssr117531 1055 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs387372690
MGI SNP Detail		 Chr12:103833102 Tssr117531 1158 bp upstream
 SNP T T T T T T T T T T T T T T T T T T
rs585632020
MGI SNP Detail		 Chr12:103833289 Tssr117531 1345 bp upstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs249666202
MGI SNP Detail		 Chr12:103833363 Tssr117531 1419 bp upstream
 SNP A/G G G G A G A G G G G A A A A A A G G A G G A G G G G A G G A G A A G G G A A G G G G G G G A G G G G
rs45840023
MGI SNP Detail		 Chr12:103833370 Tssr117531 1426 bp upstream
 SNP A/C C A C
rs48532788
MGI SNP Detail		 Chr12:103833410 Tssr117531 1466 bp upstream
 SNP C/T T C
rs47733669
MGI SNP Detail		 Chr12:103833438 Tssr117531 1494 bp upstream
 SNP A/T A T A
rs580488847
MGI SNP Detail		 Chr12:103833530 Tssr117531 1586 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs584137064
MGI SNP Detail		 Chr12:103833541 Tssr117531 1597 bp upstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs586757388
MGI SNP Detail		 Chr12:103833565 Tssr117531 1621 bp upstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs586807828
MGI SNP Detail		 Chr12:103833859 Tssr117531 1915 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G G G G G G G G G G G G
rs30766048
MGI SNP Detail		 Chr12:103833874 Tssr117531 1930 bp upstream
 SNP A/G A G
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Showing SNP(s) 1 - 87 of 87
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory