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Mouse SNP Summary
Symbol
Name
ID 		Tssr117883
transcription start site region 117883
MGI:6045650

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Showing SNP(s) 1 - 58 of 58

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs257063645
MGI SNP Detail
Alliance Variant		 Chr12:112639358 Akt1 Intron
Akt1 Noncoding-Transcript-Variant
Rr473552 within coordinates of
Tssr117883 1850 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs227498265
MGI SNP Detail
Alliance Variant		 Chr12:112639585 Akt1 Intron
Akt1 Noncoding-Transcript-Variant
Rr473553 within coordinates of
Tssr117883 1623 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs29489966
MGI SNP Detail
Alliance Variant		 Chr12:112639806 Akt1 Intron
Akt1 Noncoding-Transcript-Variant
Cpgi5173 within coordinates of
Rr473553 within coordinates of
Tssr117883 1402 bp downstream
 SNP G/T T G
rs220140142
MGI SNP Detail
Alliance Variant		 Chr12:112639808 Akt1 Intron
Akt1 Noncoding-Transcript-Variant
Cpgi5173 within coordinates of
Rr473553 within coordinates of
Tssr117883 1400 bp downstream
 SNP A A A
rs48088355
MGI SNP Detail
Alliance Variant		 Chr12:112639976 Akt1 Intron
Akt1 Noncoding-Transcript-Variant
Cpgi5173 within coordinates of
Rr473553 within coordinates of
Tssr117883 1232 bp downstream
 SNP T T
rs237735857
MGI SNP Detail
Alliance Variant		 Chr12:112640236 Akt1 Intron
Akt1 mRNA-UTR
Akt1 Noncoding-Transcript-Variant
Cpgi5173 within coordinates of
Rr473553 within coordinates of
Tssr117883 972 bp downstream
 SNP C/T T C
rs216768006
MGI SNP Detail
Alliance Variant		 Chr12:112640359 Akt1 Intron
Akt1 mRNA-UTR
Akt1 Noncoding-Transcript-Variant
Cpgi5173 within coordinates of
Rr473553 within coordinates of
Tssr117883 849 bp downstream
 SNP A/G A G G A A A A G G A A A A A G G G A A G A A G A A A A A G G A A A A G G G G G
rs584266663
MGI SNP Detail
Alliance Variant		 Chr12:112640579 Akt1 Intron
Akt1 mRNA-UTR
Akt1 Noncoding-Transcript-Variant
Cpgi5173 within coordinates of
Rr473553 within coordinates of
Tssr117883 629 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C
rs236553773
MGI SNP Detail
Alliance Variant		 Chr12:112640590 Akt1 Intron
Akt1 mRNA-UTR
Akt1 Noncoding-Transcript-Variant
Cpgi5173 within coordinates of
Rr473553 within coordinates of
Tssr117883 618 bp downstream
 SNP A/G G G A A A A G A A A G G A A G A A A A A G G A A A A G G G G
rs216175065
MGI SNP Detail
Alliance Variant		 Chr12:112640663 Akt1 Intron
Akt1 mRNA-UTR
Akt1 Noncoding-Transcript-Variant
Cpgi5173 within coordinates of
Rr473553 within coordinates of
Tssr117879 within coordinates of
Tssr117883 545 bp downstream
 SNP A/C C A A A C A A C C C A C A A A A A C A A A C C C C
rs236500503
MGI SNP Detail
Alliance Variant		 Chr12:112640879 Akt1 Intron
Akt1 Noncoding-Transcript-Variant
Cpgi5173 within coordinates of
Rr473556 within coordinates of
Tssr117883 329 bp downstream
 SNP C/G C C G G C C C C C G C C C C C C C C G G C C C G C C C C C C C C C C C C C G C C C C C C C C C G G G G
rs254807752
MGI SNP Detail
Alliance Variant		 Chr12:112640927 Akt1 Intron
Akt1 Noncoding-Transcript-Variant
Cpgi5173 within coordinates of
Gm30150 within coordinates of
Rr473556 within coordinates of
Tssr117883 281 bp downstream
 SNP G G G
rs223653848
MGI SNP Detail
Alliance Variant		 Chr12:112640986 Akt1 Intron
Akt1 Noncoding-Transcript-Variant
Cpgi5173 within coordinates of
Gm30150 within coordinates of
Rr473556 within coordinates of
Tssr117883 222 bp downstream
 SNP C/T C T
rs251708937
MGI SNP Detail
Alliance Variant		 Chr12:112641056 Akt1 Intron
Akt1 Noncoding-Transcript-Variant
Cpgi5173 within coordinates of
Gm30150 within coordinates of
Rr473556 within coordinates of
Tssr117883 152 bp downstream
 SNP T T T
rs47164281
MGI SNP Detail
Alliance Variant		 Chr12:112641066 Akt1 Intron
Akt1 Noncoding-Transcript-Variant
Cpgi5173 within coordinates of
Gm30150 within coordinates of
Rr473556 within coordinates of
Tssr117883 142 bp downstream
 SNP A/G G A G G
rs221771740
MGI SNP Detail
Alliance Variant		 Chr12:112641124 Akt1 Intron
Akt1 Noncoding-Transcript-Variant
Cpgi5173 within coordinates of
Gm30150 within coordinates of
Rr473556 within coordinates of
Tssr117883 84 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C T C C C C C C C C C C C C C C T C C C C C C C
rs108190790
MGI SNP Detail
Alliance Variant		 Chr12:112641127 Akt1 Intron
Akt1 Noncoding-Transcript-Variant
Cpgi5173 within coordinates of
Gm30150 within coordinates of
Rr473556 within coordinates of
Tssr117883 81 bp downstream
 SNP C/T T C
rs49627293
MGI SNP Detail		 Chr12:112641357 Gm30150 within coordinates of
Rr473556 within coordinates of
Tssr117883 109 bp upstream
 SNP A/G A G G A
rs387003701
MGI SNP Detail		 Chr12:112641547 Gm30150 within coordinates of
Rr473556 within coordinates of
Tssr117883 299 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G A A G G
rs49016476
MGI SNP Detail		 Chr12:112641566 Gm30150 within coordinates of
Rr473556 within coordinates of
Tssr117883 318 bp upstream
 SNP A/G G A G A
rs258762473
MGI SNP Detail		 Chr12:112641577 Gm30150 within coordinates of
Rr473556 within coordinates of
Tssr117883 329 bp upstream
 SNP G/T G T
rs45792286
MGI SNP Detail		 Chr12:112641615 Gm30150 within coordinates of
Rr473556 within coordinates of
Tssr117883 367 bp upstream
 SNP C/T T C T T
rs45917895
MGI SNP Detail		 Chr12:112641617 Gm30150 within coordinates of
Rr473556 within coordinates of
Tssr117883 369 bp upstream
 SNP A/T A T A A
rs212617400
MGI SNP Detail		 Chr12:112641625 Gm30150 within coordinates of
Rr473556 within coordinates of
Tssr117883 377 bp upstream
 SNP C/G G C
rs244289163
MGI SNP Detail		 Chr12:112641716 Gm30150 within coordinates of
Rr473556 within coordinates of
Tssr117883 468 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs108785229
MGI SNP Detail		 Chr12:112641738 Gm30150 within coordinates of
Rr473556 within coordinates of
Tssr117883 490 bp upstream
 SNP A/G G A G
rs108030613
MGI SNP Detail		 Chr12:112641740 Gm30150 within coordinates of
Rr473556 within coordinates of
Tssr117883 492 bp upstream
 SNP A/T A T A
rs246657013
MGI SNP Detail		 Chr12:112641762 Gm30150 within coordinates of
Rr473556 within coordinates of
Tssr117883 514 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234445520
MGI SNP Detail		 Chr12:112641767 Gm30150 within coordinates of
Rr473556 within coordinates of
Tssr117883 519 bp upstream
 SNP C/T C T
rs259971793
MGI SNP Detail		 Chr12:112641801 Gm30150 within coordinates of
Rr473556 within coordinates of
Tssr117883 553 bp upstream
 SNP A/G A G
rs251745482
MGI SNP Detail		 Chr12:112641842 Gm30150 within coordinates of
Rr473556 within coordinates of
Tssr117883 594 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217902850
MGI SNP Detail		 Chr12:112642010 Gm30150 within coordinates of
Rr473556 within coordinates of
Tssr117883 762 bp upstream
 SNP C C C
rs235771704
MGI SNP Detail		 Chr12:112642039 Gm30150 within coordinates of
Rr473556 within coordinates of
Tssr117883 791 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241008878
MGI SNP Detail		 Chr12:112642049 Gm30150 within coordinates of
Rr473556 within coordinates of
Tssr117883 801 bp upstream
 SNP C/T T C
rs258649996
MGI SNP Detail		 Chr12:112642146 Gm30150 within coordinates of
Rr473556 within coordinates of
Tssr117883 898 bp upstream
 SNP A A A
rs220079288
MGI SNP Detail		 Chr12:112642172 Gm30150 within coordinates of
Rr473556 within coordinates of
Tssr117883 924 bp upstream
 SNP C/G C G
rs231454550
MGI SNP Detail		 Chr12:112642222 Gm30150 within coordinates of
Rr473556 within coordinates of
Tssr117883 974 bp upstream
 SNP A/T T A
rs224733005
MGI SNP Detail		 Chr12:112642290 Gm30150 within coordinates of
Rr473556 within coordinates of
Tssr117883 1042 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs29123565
MGI SNP Detail		 Chr12:112642405 Tssr117883 1157 bp upstream
 SNP A/C C A C
rs262709199
MGI SNP Detail		 Chr12:112642492 Tssr117883 1244 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249002317
MGI SNP Detail		 Chr12:112642522 Tssr117883 1274 bp upstream
 SNP A/G A G
rs47096497
MGI SNP Detail		 Chr12:112642591 Tssr117883 1343 bp upstream
 SNP G G G
rs51416506
MGI SNP Detail		 Chr12:112642637 Tssr117883 1389 bp upstream
 SNP A/G A G
rs45980574
MGI SNP Detail		 Chr12:112642691 Tssr117883 1443 bp upstream
 SNP C/T C T C T C
rs48703133
MGI SNP Detail		 Chr12:112642718 Tssr117883 1470 bp upstream
 SNP A/C C A C
rs52014071
MGI SNP Detail		 Chr12:112642724 Tssr117883 1476 bp upstream
 SNP C/T T C T C T
rs230144523
MGI SNP Detail		 Chr12:112642725 Tssr117883 1477 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs29173076
MGI SNP Detail		 Chr12:112642786 Tssr117883 1538 bp upstream
 SNP C/G G C G C G
rs258658338
MGI SNP Detail		 Chr12:112642790 Tssr117883 1542 bp upstream
 SNP C/G C G
rs29490477
MGI SNP Detail		 Chr12:112642850 Tssr117883 1602 bp upstream
 SNP A/G A G A G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs246962139
MGI SNP Detail		 Chr12:112642851 Tssr117883 1603 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs29217755
MGI SNP Detail		 Chr12:112642911 Tssr117883 1663 bp upstream
 SNP C/T T C
rs233209910
MGI SNP Detail		 Chr12:112643074 Tssr117883 1826 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs29186225
MGI SNP Detail		 Chr12:112643085 Tssr117883 1837 bp upstream
 SNP C/G C G C G C
rs48452251
MGI SNP Detail		 Chr12:112643130 Tssr117883 1882 bp upstream
 SNP A/G G A G G
rs29153291
MGI SNP Detail		 Chr12:112643177 Tssr117883 1929 bp upstream
 SNP A/G G A G A G
rs262355627
MGI SNP Detail		 Chr12:112643203 Tssr117883 1955 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220210294
MGI SNP Detail		 Chr12:112643228 Tssr117883 1980 bp upstream
 SNP C/T C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
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Showing SNP(s) 1 - 58 of 58
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory