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Mouse SNP Summary
Symbol
Name
ID
Tssr120403
transcription start site region 120403
MGI:6048170

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs49634575
MGI SNP Detail
Chr13:75986150 Tssr120403 1971 bp upstream
SNP A/G G G G G G G A G G G A G G A G G
rs237519434
MGI SNP Detail
Chr13:75986246 Tssr120403 1875 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs45973651
MGI SNP Detail
Chr13:75986330 Tssr120403 1791 bp upstream
SNP C/T C C C C T C C C T C C T C C
rs29251675
MGI SNP Detail
Chr13:75986369 Tssr120403 1752 bp upstream
SNP A/G G G G G A A G G G A G G A G G
rs236590272
MGI SNP Detail
Chr13:75986532 Tssr120403 1589 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs248025825
MGI SNP Detail
Chr13:75986542 Tssr120403 1579 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A
rs29639907
MGI SNP Detail
Chr13:75986643 Tssr120403 1478 bp upstream
SNP A/C A A A A A A C C A A A C A A C A A
rs246221990
MGI SNP Detail
Chr13:75986648 Tssr120403 1473 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs263704539
MGI SNP Detail
Chr13:75986743 Tssr120403 1378 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29227254
MGI SNP Detail
Chr13:75986953 Tssr120403 1168 bp upstream
SNP A/G G G G G G G G A A G G G A G G G G G
rs248377663
MGI SNP Detail
Chr13:75986975 Tssr120403 1146 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs29635207
MGI SNP Detail
Chr13:75986985 Tssr120403 1136 bp upstream
SNP C/T T T T T T T T C C T T T C T T C T T
rs225288224
MGI SNP Detail
Chr13:75986986 Tssr120403 1135 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243793269
MGI SNP Detail
Chr13:75987010 Tssr120403 1111 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs258631767
MGI SNP Detail
Chr13:75987076 Tssr120403 1045 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226046946
MGI SNP Detail
Chr13:75987088 Tssr120403 1033 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254993127
MGI SNP Detail
Chr13:75987121 Tssr120403 1000 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs216393219
MGI SNP Detail
Chr13:75987137 Tssr120403 984 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs29239184
MGI SNP Detail
Chr13:75987147 Tssr120403 974 bp upstream
SNP C/T T T T T T C C T T T C T T T
rs254351893
MGI SNP Detail
Chr13:75987177 Tssr120403 944 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29235149
MGI SNP Detail
Chr13:75987178 Tssr120403 943 bp upstream
SNP A/G A A G A A A
rs30046829
MGI SNP Detail
Chr13:75987182 Tssr120403 939 bp upstream
SNP C/G C C G C C C
rs29880183
MGI SNP Detail
Chr13:75987228 Tssr120403 893 bp upstream
SNP C/T T T T T T T T C C T T T C T T C T T
rs219975265
MGI SNP Detail
Chr13:75987246 Tssr120403 875 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236074543
MGI SNP Detail
Chr13:75987267 Tssr120403 854 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs263468880
MGI SNP Detail
Chr13:75987387 Tssr120403 734 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29911093
MGI SNP Detail
Chr13:75987395 Tssr120403 726 bp upstream
SNP C/T C C T C C C
rs251440742
MGI SNP Detail
Chr13:75987398 Tssr120403 723 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs29571343
MGI SNP Detail
Chr13:75987409 Tssr120403 712 bp upstream
SNP A/G G G A G G G
rs218922059
MGI SNP Detail
Chr13:75987439 Tssr120403 682 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs29513943
MGI SNP Detail
Chr13:75987443 Tssr120403 678 bp upstream
SNP C/T T T T T T T C C T T T C T T C T T
rs258669523
MGI SNP Detail
Chr13:75987470 Tssr120403 651 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230582139
MGI SNP Detail
Chr13:75987501 Tssr120403 620 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs253391154
MGI SNP Detail
Chr13:75987526 Tssr120403 595 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29526315
MGI SNP Detail
Chr13:75987567 Tssr120403 554 bp upstream
SNP C/T C C C C C C C T T C C C T C C T C C
rs30006285
MGI SNP Detail
Chr13:75987611 Tssr120403 510 bp upstream
SNP A/G A A A A A A A G G A A A G A A A A A
rs259884701
MGI SNP Detail
Chr13:75987647 Tssr120403 474 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A G A A A A A A A A A A A A A G A A A A A A A A A A A G
rs29902639
MGI SNP Detail
Chr13:75987790 Tssr120403 331 bp upstream
SNP A/T A A A A A A A T T A A A T A A T A
rs230405711
MGI SNP Detail
Chr13:75987797 Tssr120403 324 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580985723
MGI SNP Detail
Chr13:75987828 Tssr120403 293 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs242318558
MGI SNP Detail
Chr13:75987831 Tssr120403 290 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214344273
MGI SNP Detail
Chr13:75987834 Tssr120403 287 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs237931690
MGI SNP Detail
Chr13:75987871 Tssr120403 250 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs259272555
MGI SNP Detail
Chr13:75987880 Tssr120403 241 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs29493924
MGI SNP Detail
Chr13:75987905 Tssr120403 216 bp upstream
SNP C/G G G G G G G G C C G G G C G G C G G
rs240533701
MGI SNP Detail
Chr13:75988254 Glrx within coordinates of
Tssr120403 91 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs254594790
MGI SNP Detail
Chr13:75988347 Glrx within coordinates of
Tssr120403 184 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29550902
MGI SNP Detail
Chr13:75988386 Glrx within coordinates of
Tssr120403 223 bp downstream
SNP A/C A A A A A C C A A A C A A C A A
rs237248312
MGI SNP Detail
Chr13:75988412 Glrx within coordinates of
Tssr120403 249 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs252421020
MGI SNP Detail
Chr13:75988451 Glrx within coordinates of
Tssr120403 288 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29234460
MGI SNP Detail
Chr13:75988512 Glrx within coordinates of
Tssr120403 349 bp downstream
SNP C/T T T T T T T C C T T T C T T C T T
rs249476825
MGI SNP Detail
Chr13:75988583 Glrx within coordinates of
Tssr120403 420 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs263294496
MGI SNP Detail
Chr13:75988602 Glrx within coordinates of
Tssr120403 439 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235379383
MGI SNP Detail
Chr13:75988854 Glrx within coordinates of
Tssr120403 691 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs49702130
MGI SNP Detail
Chr13:75988912 Glrx within coordinates of
Tssr120403 749 bp downstream
SNP A/G A A G A A G A A G A
rs258703988
MGI SNP Detail
Chr13:75988932 Glrx within coordinates of
Tssr120403 769 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48455484
MGI SNP Detail
Chr13:75988968 Glrx within coordinates of
Tssr120403 805 bp downstream
SNP C/T C C C C C C T C C C T C C T C C
rs49490283
MGI SNP Detail
Chr13:75989059 Glrx within coordinates of
Tssr120403 896 bp downstream
SNP C C C C C C
rs50198327
MGI SNP Detail
Chr13:75989097 Glrx within coordinates of
Tssr120403 934 bp downstream
SNP A/T T T T T T T T A T T T A T T A T T
rs229851197
MGI SNP Detail
Chr13:75989103 Glrx within coordinates of
Tssr120403 940 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs258209181
MGI SNP Detail
Chr13:75989171 Glrx within coordinates of
Tssr120403 1008 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215632519
MGI SNP Detail
Chr13:75989185 Glrx within coordinates of
Tssr120403 1022 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29243423
MGI SNP Detail
Chr13:75989277 Glrx within coordinates of
Tssr120403 1114 bp downstream
SNP A/G G G G G G G G A A G G G A G G G G G
rs254638384
MGI SNP Detail
Chr13:75989350 Glrx within coordinates of
Tssr120403 1187 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29512953
MGI SNP Detail
Chr13:75989418 Glrx within coordinates of
Tssr120403 1255 bp downstream
SNP A/C C C A C C C
rs29547332
MGI SNP Detail
Chr13:75989430 Glrx within coordinates of
Tssr120403 1267 bp downstream
SNP A/G G G A G G G
rs252081861
MGI SNP Detail
Chr13:75989439 Glrx within coordinates of
Tssr120403 1276 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246931658
MGI SNP Detail
Chr13:75989630 Glrx within coordinates of
Tssr120403 1467 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs50703339
MGI SNP Detail
Chr13:75989658 Glrx within coordinates of
Tssr120403 1495 bp downstream
SNP G G G
rs227077761
MGI SNP Detail
Chr13:75989684 Glrx within coordinates of
Tssr120403 1521 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241052862
MGI SNP Detail
Chr13:75989687 Glrx within coordinates of
Tssr120403 1524 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs51479569
MGI SNP Detail
Chr13:75989787 Glrx within coordinates of
Tssr120403 1624 bp downstream
SNP C/T C C T C C T T T C
rs224039677
MGI SNP Detail
Chr13:75989794 Glrx within coordinates of
Tssr120403 1631 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs578879577
MGI SNP Detail
Chr13:75989809 Glrx within coordinates of
Tssr120403 1646 bp downstream
SNP C/T T T T T T T T T T T T T T C
rs50512203
MGI SNP Detail
Chr13:75989818 Glrx within coordinates of
Tssr120403 1655 bp downstream
SNP G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs263567685
MGI SNP Detail
Chr13:75989845 Glrx within coordinates of
Tssr120403 1682 bp downstream
SNP C/T C T
rs229795778
MGI SNP Detail
Chr13:75989885 Glrx within coordinates of
Tssr120403 1722 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs51021910
MGI SNP Detail
Chr13:75989918 Glrx within coordinates of
Tssr120403 1755 bp downstream
SNP A A A A A
rs216124124
MGI SNP Detail
Chr13:75989956 Glrx within coordinates of
Tssr120403 1793 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29868384
MGI SNP Detail
Chr13:75989989 Glrx within coordinates of
Tssr120403 1826 bp downstream
SNP C/T C C C C C T T C C C T C C T C C
rs247852752
MGI SNP Detail
Chr13:75989996 Glrx within coordinates of
Tssr120403 1833 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs30074622
MGI SNP Detail
Chr13:75990012 Glrx within coordinates of
Tssr120403 1849 bp downstream
SNP A/G A A G A A
rs49500353
MGI SNP Detail
Chr13:75990039 Glrx within coordinates of
Tssr120403 1876 bp downstream
SNP A/C C A C A C A C
rs230001664
MGI SNP Detail
Chr13:75990043 Glrx within coordinates of
Tssr120403 1880 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs29820935
MGI SNP Detail
Chr13:75990045 Glrx within coordinates of
Tssr120403 1882 bp downstream
SNP C/T C C C C C C T T C C C T C C C C
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Showing SNP(s) 1 - 85 of 85

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory

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