Tssr120626 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Tssr120626
transcription start site region 120626
MGI:6048393

<< first < prev1 next > last >>
Showing SNP(s) 1 - 97 of 97

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.

Show only selected strains with alleles Show all selected strains
Drag columns to re-order.

Column order is reset with Filter or Show option change.

Export:

SNPs to Text File

SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs50793434 MGI SNP Detail Alliance Variant	Chr13:92489960	Msh3 Intron Msh3 Noncoding-Transcript-Variant Tssr120626 1787 bp upstream	SNP	A/G																																			G	A						G
rs226118629 MGI SNP Detail Alliance Variant	Chr13:92490051	Msh3 Intron Msh3 Noncoding-Transcript-Variant Tssr120626 1696 bp upstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs240393562 MGI SNP Detail Alliance Variant	Chr13:92490065	Msh3 Intron Msh3 Noncoding-Transcript-Variant Tssr120626 1682 bp upstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	A	G	G	G	G	G	A	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs257674890 MGI SNP Detail Alliance Variant	Chr13:92490066	Msh3 Intron Msh3 Noncoding-Transcript-Variant Tssr120626 1681 bp upstream	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	C	A	A	A	A	A	A	A	C	A	A	A	A	A	C	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A
rs226127754 MGI SNP Detail Alliance Variant	Chr13:92490085	Msh3 Intron Msh3 Noncoding-Transcript-Variant Tssr120626 1662 bp upstream	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs237672160 MGI SNP Detail Alliance Variant	Chr13:92490136	Msh3 Intron Msh3 Noncoding-Transcript-Variant Tssr120626 1611 bp upstream	SNP	A/C	C	C			C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C
rs262011032 MGI SNP Detail Alliance Variant	Chr13:92490152	Msh3 Intron Msh3 Noncoding-Transcript-Variant Tssr120626 1595 bp upstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs46862315 MGI SNP Detail Alliance Variant	Chr13:92490171	Msh3 Intron Msh3 Noncoding-Transcript-Variant Tssr120626 1576 bp upstream	SNP	A/G		A			A	A		A		A			A								G					A	A			A					G	A						G												A
rs51316166 MGI SNP Detail Alliance Variant	Chr13:92490232	Msh3 Intron Msh3 Noncoding-Transcript-Variant Tssr120626 1515 bp upstream	SNP	A/G					A	A															G									A					G	A						G
rs50507823 MGI SNP Detail Alliance Variant	Chr13:92490445	Msh3 Intron Msh3 Noncoding-Transcript-Variant Tssr120626 1302 bp upstream	SNP	A/C		C			C	C		C		C			C								A					C	C			C					A	C				C		A												C
rs228497408 MGI SNP Detail Alliance Variant	Chr13:92490449	Msh3 Intron Msh3 Noncoding-Transcript-Variant Tssr120626 1298 bp upstream	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A	A	A
rs247204019 MGI SNP Detail Alliance Variant	Chr13:92490488	Msh3 Intron Msh3 Noncoding-Transcript-Variant Tssr120626 1259 bp upstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs51693723 MGI SNP Detail Alliance Variant	Chr13:92490497	Msh3 Intron Msh3 Noncoding-Transcript-Variant Msh3 Splice-Site Tssr120626 1250 bp upstream	SNP	G/T		T			T	T		T		T			T								G					T	T			T					G	T						G												T
rs46373764 MGI SNP Detail Alliance Variant	Chr13:92490520	Msh3 Intron Msh3 Noncoding-Transcript-Variant Tssr120626 1227 bp upstream	SNP	C/T		T			T	T		T		T			T													T	T			T					C	T						C												T
rs261829786 MGI SNP Detail Alliance Variant	Chr13:92490621	Msh3 Intron Msh3 Noncoding-Transcript-Variant Tssr120626 1126 bp upstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs48617292 MGI SNP Detail Alliance Variant	Chr13:92490750	Msh3 Intron Msh3 Noncoding-Transcript-Variant Rr483661 within coordinates of Tssr120626 997 bp upstream	SNP	G/T		G			G	G		G		G			G								T					G	G			G					T	G						T												G
rs235970704 MGI SNP Detail Alliance Variant	Chr13:92490813	Msh3 Intron Msh3 Noncoding-Transcript-Variant Rr483661 within coordinates of Tssr120626 934 bp upstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G	G	G	G	A	G	G	G	G	G	A	G	G	G	G	G	G		A	G	G	G	G	G	G	G	G	G	G	G	G
rs260737182 MGI SNP Detail Alliance Variant	Chr13:92490929	Cpgi5933 within coordinates of Msh3 Intron Msh3 Noncoding-Transcript-Variant Rr483661 within coordinates of Tssr120626 818 bp upstream	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs222168417 MGI SNP Detail Alliance Variant	Chr13:92491000	Cpgi5933 within coordinates of Msh3 Intron Msh3 Noncoding-Transcript-Variant Rr483661 within coordinates of Tssr120626 747 bp upstream	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	G	T	T	T	T
rs240329735 MGI SNP Detail Alliance Variant	Chr13:92491008	Cpgi5933 within coordinates of Msh3 Intron Msh3 Noncoding-Transcript-Variant Rr403896 within coordinates of Rr483661 within coordinates of Tssr120626 739 bp upstream	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A	A
rs29707673 MGI SNP Detail Alliance Variant	Chr13:92491060	Cpgi5933 within coordinates of Msh3 Intron Msh3 Noncoding-Transcript-Variant Rr403896 within coordinates of Rr483661 within coordinates of Tssr120626 687 bp upstream	SNP	A/G		A		A	G											G										A						G																		A
rs29905036 MGI SNP Detail Alliance Variant	Chr13:92491066	Cpgi5933 within coordinates of Msh3 Intron Msh3 Noncoding-Transcript-Variant Rr403896 within coordinates of Rr483661 within coordinates of Tssr120626 681 bp upstream	SNP	A/G		G		G	A											G										G
rs30026058 MGI SNP Detail Alliance Variant	Chr13:92491067	Cpgi5933 within coordinates of Msh3 Intron Msh3 Noncoding-Transcript-Variant Rr403896 within coordinates of Rr483661 within coordinates of Tssr120626 680 bp upstream	SNP	C/T		C		C	T											C										C
rs264880277 MGI SNP Detail Alliance Variant	Chr13:92491082	Cpgi5933 within coordinates of Msh3 Intron Msh3 Noncoding-Transcript-Variant Rr403896 within coordinates of Rr483661 within coordinates of Tssr120626 665 bp upstream	SNP	A/C	C	C			C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs227795603 MGI SNP Detail Alliance Variant	Chr13:92491101	Cpgi5933 within coordinates of Msh3 Intron Msh3 Noncoding-Transcript-Variant Rr403896 within coordinates of Rr483661 within coordinates of Tssr120626 646 bp upstream	SNP	A/G	A	A			A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs251596022 MGI SNP Detail Alliance Variant	Chr13:92491163	Cpgi5933 within coordinates of Msh3 Intron Msh3 Noncoding-Transcript-Variant Rr403896 within coordinates of Rr483661 within coordinates of Tssr120626 584 bp upstream	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C		C	C	C	C		C	C	C	C	C		C	C	C	C	C		C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs264124894 MGI SNP Detail Alliance Variant	Chr13:92491164	Cpgi5933 within coordinates of Msh3 Intron Msh3 Noncoding-Transcript-Variant Rr403896 within coordinates of Rr483661 within coordinates of Tssr120626 583 bp upstream	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G		G	G	G	G		G	G	G	G	G		G	G	G	G	G		G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	C	G	G	G	G
rs228461120 MGI SNP Detail Alliance Variant	Chr13:92491168	Cpgi5933 within coordinates of Msh3 Intron Msh3 Noncoding-Transcript-Variant Rr403896 within coordinates of Rr483661 within coordinates of Tssr120626 579 bp upstream	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C		C	C	C	C		C	T	C	C	T		C	C	C	T	C		C	C	C		C	C	C	C	C	C		T	C	C	C	C	C	C	C	T	C	C	C	C
rs247157454 MGI SNP Detail Alliance Variant	Chr13:92491322	Cpgi5933 within coordinates of Dhfr mRNA-UTR Msh3 Coding-Synonymous Msh3 mRNA-UTR Msh3 Noncoding-Transcript-Variant Tssr120626 425 bp upstream	SNP	C/T		C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs50272842 MGI SNP Detail Alliance Variant	Chr13:92491337	Cpgi5933 within coordinates of Dhfr mRNA-UTR Msh3 Coding-Synonymous Msh3 mRNA-UTR Msh3 Noncoding-Transcript-Variant Tssr120626 410 bp upstream	SNP	C/T		T			T	T		T		T			T								C					T	T			T					C	T						C												T
rs226529891 MGI SNP Detail Alliance Variant	Chr13:92491413	Cpgi5933 within coordinates of Dhfr mRNA-UTR Msh3 mRNA-UTR Msh3 Noncoding-Transcript-Variant Tssr120626 334 bp upstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G	G	G	G	A	G	G	G	G	G	A	G	G	G	G	G	G		G	G	G	G	G	G	G		G	G	G	G	G
rs52192714 MGI SNP Detail Alliance Variant	Chr13:92491437	Cpgi5933 within coordinates of Dhfr mRNA-UTR Msh3 mRNA-UTR Msh3 Noncoding-Transcript-Variant Tssr120626 310 bp upstream	SNP	A/G					G	G		G		G			G								A					G				G					A	G						G												G
rs212827696 MGI SNP Detail Alliance Variant	Chr13:92491511	Cpgi5933 within coordinates of Dhfr mRNA-UTR Msh3 mRNA-UTR Msh3 Noncoding-Transcript-Variant Rr483664 within coordinates of Tssr120626 236 bp upstream Tssr123430 within coordinates of	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs234348333 MGI SNP Detail Alliance Variant	Chr13:92491538	Cpgi5933 within coordinates of Dhfr mRNA-UTR Rr483664 within coordinates of Tssr120626 209 bp upstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A
rs264073246 MGI SNP Detail Alliance Variant	Chr13:92491558	Cpgi5933 within coordinates of Dhfr mRNA-UTR Rr483664 within coordinates of Tssr120626 189 bp upstream	SNP	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G		G	G	G	G
rs216478403 MGI SNP Detail Alliance Variant	Chr13:92491566	Cpgi5933 within coordinates of Dhfr mRNA-UTR Rr483664 within coordinates of Tssr120626 181 bp upstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G		A	G	G	G
rs586827052 MGI SNP Detail Alliance Variant	Chr13:92491606	Cpgi5933 within coordinates of Dhfr mRNA-UTR Rr483664 within coordinates of Tssr120626 141 bp upstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A		A	A	A	A	A	A	A	A	A	A		A	A		A	A	A			G	A	A	A
rs8245022 MGI SNP Detail	Chr13:92491643	Cpgi5933 within coordinates of Dhfr within coordinates of Rr483664 within coordinates of Tssr120626 104 bp upstream	SNP	A/G					A				G
rs3023391 MGI SNP Detail Alliance Variant	Chr13:92491654	Cpgi5933 within coordinates of Dhfr mRNA-UTR Rr483664 within coordinates of Tssr120623 within coordinates of Tssr120626 93 bp upstream	SNP	A/G					A											G										G						A																		G
rs251485593 MGI SNP Detail Alliance Variant	Chr13:92491694	Cpgi5933 within coordinates of Dhfr mRNA-UTR Rr483664 within coordinates of Tssr120624 within coordinates of Tssr120626 53 bp upstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G			G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G		A	G	G	G	G
rs220319258 MGI SNP Detail Alliance Variant	Chr13:92491735	Cpgi5933 within coordinates of Dhfr mRNA-UTR Rr483664 within coordinates of Tssr120626 12 bp upstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs246384531 MGI SNP Detail Alliance Variant	Chr13:92491814	Cpgi5933 within coordinates of Dhfr Coding-Synonymous Rr483664 within coordinates of Tssr120626 58 bp downstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs256701376 MGI SNP Detail Alliance Variant	Chr13:92491846	Cpgi5933 within coordinates of Dhfr Coding-NonSynonymous Rr483664 within coordinates of Tssr120626 90 bp downstream	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C		A	C	C	C	C
rs220177140 MGI SNP Detail Alliance Variant	Chr13:92491870	Cpgi5933 within coordinates of Dhfr Intron Rr483664 within coordinates of Tssr120626 114 bp downstream	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs248438736 MGI SNP Detail Alliance Variant	Chr13:92491905	Cpgi5933 within coordinates of Dhfr Intron Rr483664 within coordinates of Tssr120626 149 bp downstream	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	G	T	T	T	T
rs260750048 MGI SNP Detail Alliance Variant	Chr13:92491925	Cpgi5933 within coordinates of Dhfr Intron Rr483664 within coordinates of Tssr120626 169 bp downstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs222059397 MGI SNP Detail Alliance Variant	Chr13:92491949	Cpgi5933 within coordinates of Dhfr Intron Rr483664 within coordinates of Tssr120626 193 bp downstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs240734450 MGI SNP Detail Alliance Variant	Chr13:92491952	Cpgi5933 within coordinates of Dhfr Intron Rr483664 within coordinates of Tssr120626 196 bp downstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs258958772 MGI SNP Detail Alliance Variant	Chr13:92491966	Cpgi5933 within coordinates of Dhfr Intron Rr483664 within coordinates of Tssr120626 210 bp downstream	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A	A
rs226470733 MGI SNP Detail Alliance Variant	Chr13:92491977	Cpgi5933 within coordinates of Dhfr Intron Rr483664 within coordinates of Tssr120626 221 bp downstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G		A	G	G	G	G
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs255207069 MGI SNP Detail Alliance Variant	Chr13:92491996	Cpgi5933 within coordinates of Dhfr Intron Rr483664 within coordinates of Tssr120626 240 bp downstream	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs261941058 MGI SNP Detail Alliance Variant	Chr13:92492024	Cpgi5933 within coordinates of Dhfr Intron Tssr120626 268 bp downstream	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs227698526 MGI SNP Detail Alliance Variant	Chr13:92492115	Cpgi5933 within coordinates of Dhfr Intron Tssr120626 359 bp downstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs254397618 MGI SNP Detail Alliance Variant	Chr13:92492319	Dhfr Intron Tssr120626 563 bp downstream	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T
rs216419718 MGI SNP Detail Alliance Variant	Chr13:92492478	Dhfr Intron Tssr120626 722 bp downstream	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs233371989 MGI SNP Detail Alliance Variant	Chr13:92492503	Dhfr Intron Tssr120626 747 bp downstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G	G	G	G	A	G	G	G	G	G	A	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs245100332 MGI SNP Detail Alliance Variant	Chr13:92492561	Dhfr Intron Tssr120626 805 bp downstream	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs214658501 MGI SNP Detail Alliance Variant	Chr13:92492572	Dhfr Intron Tssr120626 816 bp downstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs236491599 MGI SNP Detail Alliance Variant	Chr13:92492589	Dhfr Intron Tssr120626 833 bp downstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	A	G	G	G	G	G	A	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs261754777 MGI SNP Detail Alliance Variant	Chr13:92492670	Dhfr Intron Tssr120626 914 bp downstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs220939719 MGI SNP Detail Alliance Variant	Chr13:92492770	Dhfr Intron Tssr120626 1014 bp downstream	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A	A
rs243098310 MGI SNP Detail Alliance Variant	Chr13:92492853	Dhfr Intron Tssr120626 1097 bp downstream	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		T	C	C	C	C	C	C	C	C	C	C	C	C
rs254496600 MGI SNP Detail Alliance Variant	Chr13:92492854	Dhfr Intron Tssr120626 1098 bp downstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs221988525 MGI SNP Detail Alliance Variant	Chr13:92492858	Dhfr Intron Gm19308 within coordinates of Tssr120626 1102 bp downstream	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs240675496 MGI SNP Detail Alliance Variant	Chr13:92492900	Dhfr Intron Gm19308 within coordinates of Tssr120626 1144 bp downstream	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A	A	A
rs258528759 MGI SNP Detail Alliance Variant	Chr13:92492920	Dhfr Intron Gm19308 within coordinates of Tssr120626 1164 bp downstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs222964771 MGI SNP Detail Alliance Variant	Chr13:92492926	Dhfr Intron Gm19308 within coordinates of Tssr120626 1170 bp downstream	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs243006669 MGI SNP Detail Alliance Variant	Chr13:92492955	Dhfr Intron Gm19308 within coordinates of Tssr120626 1199 bp downstream	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs264844369 MGI SNP Detail Alliance Variant	Chr13:92492960	Dhfr Intron Gm19308 within coordinates of Tssr120626 1204 bp downstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs227608027 MGI SNP Detail Alliance Variant	Chr13:92492967	Dhfr Intron Gm19308 within coordinates of Tssr120626 1211 bp downstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs247462285 MGI SNP Detail Alliance Variant	Chr13:92492979	Dhfr Intron Gm19308 within coordinates of Tssr120626 1223 bp downstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs258599544 MGI SNP Detail Alliance Variant	Chr13:92493016	Dhfr Intron Gm19308 within coordinates of Tssr120626 1260 bp downstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		G	A	A	A	A	A	A	A	A	A	A	A	A
rs227303805 MGI SNP Detail Alliance Variant	Chr13:92493026	Dhfr Intron Gm19308 within coordinates of Tssr120626 1270 bp downstream	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs245049288 MGI SNP Detail Alliance Variant	Chr13:92493027	Dhfr Intron Gm19308 within coordinates of Tssr120626 1271 bp downstream	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	T	G	G	T	G	G	G	G	T	G	G	G	G	G	T	G	G	G	G	G	G		T	G	G	G	G	G	G	G	G	G	G	G	G
rs214205153 MGI SNP Detail Alliance Variant	Chr13:92493028	Dhfr Intron Gm19308 within coordinates of Tssr120626 1272 bp downstream	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs238391781 MGI SNP Detail Alliance Variant	Chr13:92493029	Dhfr Intron Gm19308 within coordinates of Tssr120626 1273 bp downstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		G	A	A	A	A	A	A	A	G	A	A	A	A
rs250174344 MGI SNP Detail Alliance Variant	Chr13:92493078	Dhfr Intron Gm19308 within coordinates of Tssr120626 1322 bp downstream	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs212665352 MGI SNP Detail Alliance Variant	Chr13:92493122	Dhfr Intron Gm19308 within coordinates of Tssr120626 1366 bp downstream	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	G	T	T	T	T
rs240695042 MGI SNP Detail Alliance Variant	Chr13:92493124	Dhfr Intron Gm19308 within coordinates of Tssr120626 1368 bp downstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs254859280 MGI SNP Detail Alliance Variant	Chr13:92493143	Dhfr Intron Gm19308 within coordinates of Tssr120626 1387 bp downstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs221923268 MGI SNP Detail Alliance Variant	Chr13:92493153	Dhfr Intron Gm19308 within coordinates of Tssr120626 1397 bp downstream	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs234038792 MGI SNP Detail Alliance Variant	Chr13:92493253	Dhfr Intron Gm19308 within coordinates of Tssr120626 1497 bp downstream	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs252184603 MGI SNP Detail Alliance Variant	Chr13:92493255	Dhfr Intron Gm19308 within coordinates of Tssr120626 1499 bp downstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs222750521 MGI SNP Detail Alliance Variant	Chr13:92493271	Dhfr Intron Gm19308 within coordinates of Tssr120626 1515 bp downstream	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C
rs245759954 MGI SNP Detail Alliance Variant	Chr13:92493274	Dhfr Intron Gm19308 within coordinates of Tssr120626 1518 bp downstream	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs256145420 MGI SNP Detail Alliance Variant	Chr13:92493277	Dhfr Intron Gm19308 within coordinates of Tssr120626 1521 bp downstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs219997416 MGI SNP Detail Alliance Variant	Chr13:92493313	Dhfr Intron Gm19308 within coordinates of Tssr120626 1557 bp downstream	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs241521824 MGI SNP Detail Alliance Variant	Chr13:92493323	Dhfr Intron Gm19308 within coordinates of Tssr120626 1567 bp downstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs259013551 MGI SNP Detail Alliance Variant	Chr13:92493338	Dhfr Intron Tssr120626 1582 bp downstream	SNP	C/T	C	C	C		C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs227246757 MGI SNP Detail Alliance Variant	Chr13:92493340	Dhfr Intron Tssr120626 1584 bp downstream	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	C	G	G	G	G
rs238882575 MGI SNP Detail Alliance Variant	Chr13:92493384	Dhfr Intron Tssr120626 1628 bp downstream	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs265214512 MGI SNP Detail Alliance Variant	Chr13:92493522	Dhfr Intron Tssr120626 1766 bp downstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs229607135 MGI SNP Detail Alliance Variant	Chr13:92493564	Dhfr Intron Tssr120626 1808 bp downstream	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T		T	T	T	T	C	T	T	T	T	T	C	T	T	T	T	T	T		C	T	T	T	T	T	T	T		T	T	T	T
rs253920517 MGI SNP Detail Alliance Variant	Chr13:92493690	Dhfr Intron Tssr120626 1934 bp downstream	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	C	G	G	G	G
rs212271191 MGI SNP Detail Alliance Variant	Chr13:92493698	Dhfr Intron Tssr120626 1942 bp downstream	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs235609564 MGI SNP Detail Alliance Variant	Chr13:92493710	Dhfr Intron Tssr120626 1954 bp downstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs248346871 MGI SNP Detail Alliance Variant	Chr13:92493755	Dhfr Intron Tssr120626 1999 bp downstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A

<< first < prev1 next > last >>
Showing SNP(s) 1 - 97 of 97

Filter

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 03/25/2025 MGI 6.24