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Mouse SNP Summary
Symbol
Name
ID 		Tssr120794
transcription start site region 120794
MGI:6048561

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Showing SNP(s) 1 - 60 of 60

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243281082
MGI SNP Detail		 Chr13:98397659 Tssr120794 1954 bp upstream
Utp15 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G G G G G G G G C G G G G G G G C G G G G
rs582254773
MGI SNP Detail		 Chr13:98397692 Tssr120794 1921 bp upstream
Utp15 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs586366158
MGI SNP Detail		 Chr13:98397706 Tssr120794 1907 bp upstream
Utp15 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs580252889
MGI SNP Detail		 Chr13:98397712 Tssr120794 1901 bp upstream
Utp15 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs262484696
MGI SNP Detail		 Chr13:98397739 Tssr120794 1874 bp upstream
Utp15 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs220695836
MGI SNP Detail		 Chr13:98397827 Tssr120794 1786 bp upstream
Utp15 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs30434431
MGI SNP Detail		 Chr13:98397878 Tssr120794 1735 bp upstream
Utp15 within coordinates of
 SNP C/T T T T T T T C T T T T T T C T
rs30434430
MGI SNP Detail		 Chr13:98398132 Tssr120794 1481 bp upstream
Utp15 within coordinates of
 SNP A/G G A A G A G
rs30434429
MGI SNP Detail		 Chr13:98398291 Tssr120794 1322 bp upstream
Utp15 within coordinates of
 SNP G/T T T T T T T G T T T T T T G T
rs239609645
MGI SNP Detail		 Chr13:98398352 Tssr120794 1261 bp upstream
Utp15 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258450163
MGI SNP Detail		 Chr13:98398422 Rr281816 within coordinates of
Tssr120794 1191 bp upstream
Utp15 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230669164
MGI SNP Detail		 Chr13:98398467 Rr281816 within coordinates of
Tssr120794 1146 bp upstream
Utp15 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250418559
MGI SNP Detail		 Chr13:98398490 Rr281816 within coordinates of
Tssr120794 1123 bp upstream
Utp15 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A A A A A A A A T A A A A A A A A A A A A
rs30074383
MGI SNP Detail		 Chr13:98398508 Rr281816 within coordinates of
Tssr120794 1105 bp upstream
Utp15 within coordinates of
 SNP C/T C T C C
rs29224658
MGI SNP Detail		 Chr13:98398521 Rr281816 within coordinates of
Tssr120794 1092 bp upstream
Utp15 within coordinates of
 SNP C/G C C C G C G
rs244041887
MGI SNP Detail		 Chr13:98398556 Rr281816 within coordinates of
Tssr120794 1057 bp upstream
Utp15 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216578664
MGI SNP Detail		 Chr13:98398565 Rr281816 within coordinates of
Tssr120794 1048 bp upstream
Utp15 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs236208896
MGI SNP Detail		 Chr13:98398566 Rr281816 within coordinates of
Tssr120794 1047 bp upstream
Utp15 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs252683532
MGI SNP Detail		 Chr13:98398576 Rr281816 within coordinates of
Tssr120794 1037 bp upstream
Utp15 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216704576
MGI SNP Detail		 Chr13:98398712 Rr281816 within coordinates of
Tssr120794 901 bp upstream
Utp15 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs238010269
MGI SNP Detail		 Chr13:98398714 Rr281816 within coordinates of
Tssr120794 899 bp upstream
Utp15 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs29684355
MGI SNP Detail		 Chr13:98398732 Rr281816 within coordinates of
Tssr120794 881 bp upstream
Utp15 within coordinates of
 SNP C/T T C T T
rs220164593
MGI SNP Detail		 Chr13:98398875 Rr281816 within coordinates of
Tssr120794 738 bp upstream
Utp15 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs242408585
MGI SNP Detail		 Chr13:98398883 Rr281816 within coordinates of
Tssr120794 730 bp upstream
Utp15 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs6353381
MGI SNP Detail		 Chr13:98398998 Rr281816 within coordinates of
Tssr120794 615 bp upstream
Utp15 within coordinates of
 SNP A/G G A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs222982673
MGI SNP Detail		 Chr13:98399132 Rr281816 within coordinates of
Tssr120794 481 bp upstream
Utp15 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs6354573
MGI SNP Detail		 Chr13:98399272 Cpgi5999 within coordinates of
Rr281816 within coordinates of
Tssr120794 341 bp upstream
Utp15 within coordinates of
 SNP A/G A A A A A A A A G G A A A A G A A G A
rs258385807
MGI SNP Detail		 Chr13:98399331 Cpgi5999 within coordinates of
Rr281816 within coordinates of
Tssr120794 282 bp upstream
Utp15 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs230543881
MGI SNP Detail		 Chr13:98399344 Cpgi5999 within coordinates of
Rr281816 within coordinates of
Tssr120794 269 bp upstream
Utp15 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247282291
MGI SNP Detail		 Chr13:98399374 Cpgi5999 within coordinates of
Rr281816 within coordinates of
Tssr120794 239 bp upstream
Utp15 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs6355132
MGI SNP Detail		 Chr13:98399375 Cpgi5999 within coordinates of
Rr281816 within coordinates of
Tssr120794 238 bp upstream
Utp15 within coordinates of
 SNP C/T T T T T T T T T T C T T T T C T T C T
rs585539569
MGI SNP Detail		 Chr13:98399433 Cpgi5999 within coordinates of
Rr281816 within coordinates of
Tssr120794 180 bp upstream
Utp15 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs227703240
MGI SNP Detail		 Chr13:98399524 Cpgi5999 within coordinates of
Rr281816 within coordinates of
Tssr120794 89 bp upstream
Tssr123622 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs244063474
MGI SNP Detail		 Chr13:98399535 Cpgi5999 within coordinates of
Rr281816 within coordinates of
Tssr120794 78 bp upstream
Tssr123623 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs216515167
MGI SNP Detail		 Chr13:98399539 Cpgi5999 within coordinates of
Rr281816 within coordinates of
Tssr120794 74 bp upstream
Tssr123623 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30434428
MGI SNP Detail		 Chr13:98399549 Cpgi5999 within coordinates of
Rr281816 within coordinates of
Tssr120794 64 bp upstream
Tssr123623 within coordinates of
 SNP C/T T T T T T T C T T T T T T T T
rs246378637
MGI SNP Detail		 Chr13:98399551 Cpgi5999 within coordinates of
Rr281816 within coordinates of
Tssr120794 62 bp upstream
Tssr123623 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs216986639
MGI SNP Detail		 Chr13:98399552 Cpgi5999 within coordinates of
Rr281816 within coordinates of
Tssr120794 61 bp upstream
Tssr123623 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236211188
MGI SNP Detail		 Chr13:98399599 Ankra2 within coordinates of
Cpgi5999 within coordinates of
Rr281816 within coordinates of
Tssr120794 14 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs262419780
MGI SNP Detail		 Chr13:98399635 Ankra2 within coordinates of
Cpgi5999 within coordinates of
Rr281816 within coordinates of
Tssr120794 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs30434427
MGI SNP Detail		 Chr13:98399662 Ankra2 within coordinates of
Cpgi5999 within coordinates of
Rr281816 within coordinates of
Tssr120794 within coordinates of
 SNP C/T T T T T T T T C T T T T C T T C T
rs230748053
MGI SNP Detail		 Chr13:98399665 Ankra2 within coordinates of
Cpgi5999 within coordinates of
Rr281816 within coordinates of
Tssr120794 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs30434426
MGI SNP Detail		 Chr13:98399685 Ankra2 within coordinates of
Cpgi5999 within coordinates of
Rr281816 within coordinates of
Tssr120794 within coordinates of
 SNP C/G G G G G G G C G G G G G G G G
rs222918915
MGI SNP Detail		 Chr13:98399763 Ankra2 within coordinates of
Cpgi5999 within coordinates of
Rr281816 within coordinates of
Tssr120794 78 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs232999173
MGI SNP Detail		 Chr13:98399833 Ankra2 within coordinates of
Cpgi5999 within coordinates of
Rr281816 within coordinates of
Tssr120794 148 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs259767183
MGI SNP Detail		 Chr13:98399880 Ankra2 within coordinates of
Cpgi5999 within coordinates of
Rr281816 within coordinates of
Tssr120794 195 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs30434425
MGI SNP Detail		 Chr13:98400388 Ankra2 within coordinates of
Rr281816 within coordinates of
Tssr120794 703 bp downstream
 SNP C/G C C C C C C G C C C C C C C C
rs579984668
MGI SNP Detail		 Chr13:98400474 Ankra2 within coordinates of
Rr281816 within coordinates of
Tssr120794 789 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244648372
MGI SNP Detail		 Chr13:98400500 Ankra2 within coordinates of
Rr281816 within coordinates of
Tssr120794 815 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264737583
MGI SNP Detail		 Chr13:98400551 Ankra2 within coordinates of
Rr281816 within coordinates of
Tssr120794 866 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs222109813
MGI SNP Detail		 Chr13:98400623 Ankra2 within coordinates of
Rr281816 within coordinates of
Tssr120794 938 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237777987
MGI SNP Detail		 Chr13:98400736 Ankra2 within coordinates of
Rr281816 within coordinates of
Tssr120794 1051 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs260357021
MGI SNP Detail		 Chr13:98400770 Ankra2 within coordinates of
Rr281816 within coordinates of
Tssr120794 1085 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30434424
MGI SNP Detail		 Chr13:98400793 Ankra2 within coordinates of
Rr281816 within coordinates of
Tssr120794 1108 bp downstream
 SNP C/G C C C C C C G C C C C C C G C
rs30433263
MGI SNP Detail		 Chr13:98401037 Ankra2 within coordinates of
Tssr120794 1352 bp downstream
 SNP C/T C C C C C T C C C C C C C
rs583400073
MGI SNP Detail		 Chr13:98401056 Ankra2 within coordinates of
Tssr120794 1371 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs586472196
MGI SNP Detail		 Chr13:98401062 Ankra2 within coordinates of
Tssr120794 1377 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs263513278
MGI SNP Detail		 Chr13:98401296 Ankra2 within coordinates of
Tssr120794 1611 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs230007041
MGI SNP Detail		 Chr13:98401435 Ankra2 within coordinates of
Tssr120794 1750 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251493603
MGI SNP Detail		 Chr13:98401451 Ankra2 within coordinates of
Tssr120794 1766 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 60 of 60
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory