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Mouse SNP Summary
Symbol
Name
ID 		Tssr121226
transcription start site region 121226
MGI:6048993

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Showing SNP(s) 1 - 59 of 59

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs245477143
MGI SNP Detail		 Chr13:117385132 Emb within coordinates of
Tssr121226 1990 bp upstream
 SNP A/C A A A A C A C C A A A A A A A A A A A A A A A A A C A A A A A A A A C A A A A A A C C C A A C A A C A C
rs250123731
MGI SNP Detail		 Chr13:117385179 Emb within coordinates of
Tssr121226 1943 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30542365
MGI SNP Detail		 Chr13:117385207 Emb within coordinates of
Tssr121226 1915 bp upstream
 SNP G/T T T G G T T T T G G T G T T T T
rs239526289
MGI SNP Detail		 Chr13:117385237 Emb within coordinates of
Tssr121226 1885 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257838635
MGI SNP Detail		 Chr13:117385250 Emb within coordinates of
Tssr121226 1872 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs233819801
MGI SNP Detail		 Chr13:117385257 Emb within coordinates of
Tssr121226 1865 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs248020066
MGI SNP Detail		 Chr13:117385270 Emb within coordinates of
Tssr121226 1852 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs264490627
MGI SNP Detail		 Chr13:117385284 Emb within coordinates of
Tssr121226 1838 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs228676202
MGI SNP Detail		 Chr13:117385317 Emb within coordinates of
Tssr121226 1805 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255229759
MGI SNP Detail		 Chr13:117385321 Emb within coordinates of
Tssr121226 1801 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs30542364
MGI SNP Detail		 Chr13:117385328 Emb within coordinates of
Tssr121226 1794 bp upstream
 SNP A/G A G G A A G G A A G A A A
rs227206713
MGI SNP Detail		 Chr13:117385337 Emb within coordinates of
Tssr121226 1785 bp upstream
 SNP C/T C C C C T C T T C C C C C C C C C C C C C C C C C T C C C C C C C C T C C C C C C T T T C C T C C C T C T
rs30541013
MGI SNP Detail		 Chr13:117385361 Emb within coordinates of
Tssr121226 1761 bp upstream
 SNP G/T T T G T T T T T T T T G T T T G T
rs216049969
MGI SNP Detail		 Chr13:117385529 Emb within coordinates of
Rr270627 within coordinates of
Tssr121226 1593 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242313309
MGI SNP Detail		 Chr13:117385565 Emb within coordinates of
Rr270627 within coordinates of
Tssr121226 1557 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs260909915
MGI SNP Detail		 Chr13:117385566 Emb within coordinates of
Rr270627 within coordinates of
Tssr121226 1556 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs212319147
MGI SNP Detail		 Chr13:117385663 Emb within coordinates of
Tssr121226 1459 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs235546980
MGI SNP Detail		 Chr13:117385679 Emb within coordinates of
Tssr121226 1443 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250056892
MGI SNP Detail		 Chr13:117385712 Emb within coordinates of
Tssr121226 1410 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs30541012
MGI SNP Detail		 Chr13:117385841 Emb within coordinates of
Tssr121226 1281 bp upstream
 SNP G/T T T G G T T T T G T T G T T T
rs29634849
MGI SNP Detail		 Chr13:117385904 Emb within coordinates of
Tssr121226 1218 bp upstream
 SNP C/T T T C C C T T T C T C T T C C T C C T
rs30541011
MGI SNP Detail		 Chr13:117385950 Emb within coordinates of
Tssr121226 1172 bp upstream
 SNP G/T G G G G G G T G G G G G G G G
rs225497625
MGI SNP Detail		 Chr13:117385952 Emb within coordinates of
Tssr121226 1170 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250945764
MGI SNP Detail		 Chr13:117385955 Emb within coordinates of
Tssr121226 1167 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs261360937
MGI SNP Detail		 Chr13:117386030 Emb within coordinates of
Tssr121226 1092 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30541010
MGI SNP Detail		 Chr13:117386036 Emb within coordinates of
Tssr121226 1086 bp upstream
 SNP C/T C C C C C C C C C C C C C T C
rs238557873
MGI SNP Detail		 Chr13:117386037 Emb within coordinates of
Tssr121226 1085 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs258298613
MGI SNP Detail		 Chr13:117386049 Emb within coordinates of
Tssr121226 1073 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579746909
MGI SNP Detail		 Chr13:117386067 Emb within coordinates of
Tssr121226 1055 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30541009
MGI SNP Detail		 Chr13:117386099 Emb within coordinates of
Tssr121226 1023 bp upstream
 SNP C/T T T T T T T C T T T T T T T
rs29251277
MGI SNP Detail		 Chr13:117386173 Emb within coordinates of
Tssr121226 949 bp upstream
 SNP A/G G G A G G G G G G G G G G A G G A A G
rs583183412
MGI SNP Detail		 Chr13:117386248 Emb within coordinates of
Tssr121225 within coordinates of
Tssr121226 874 bp upstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs216578926
MGI SNP Detail		 Chr13:117386321 Emb within coordinates of
Tssr121226 801 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233778304
MGI SNP Detail		 Chr13:117386355 Emb within coordinates of
Tssr121226 767 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260374159
MGI SNP Detail		 Chr13:117386356 Emb within coordinates of
Tssr121226 766 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586804929
MGI SNP Detail		 Chr13:117386504 Emb within coordinates of
Tssr121226 618 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs212222426
MGI SNP Detail		 Chr13:117386636 Emb within coordinates of
Tssr121226 486 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs237330542
MGI SNP Detail		 Chr13:117386643 Emb within coordinates of
Tssr121226 479 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30541008
MGI SNP Detail		 Chr13:117386681 Emb within coordinates of
Tssr121226 441 bp upstream
 SNP C/T C C C C C C T C C C C C C C C
rs214746501
MGI SNP Detail		 Chr13:117386682 Emb within coordinates of
Tssr121226 440 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233195238
MGI SNP Detail		 Chr13:117386756 Emb within coordinates of
Tssr121226 366 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252152747
MGI SNP Detail		 Chr13:117386796 Emb within coordinates of
Tssr121226 326 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs226510769
MGI SNP Detail		 Chr13:117386800 Emb within coordinates of
Tssr121226 322 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240652931
MGI SNP Detail		 Chr13:117386818 Emb within coordinates of
Tssr121226 304 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30541007
MGI SNP Detail		 Chr13:117386916 Emb within coordinates of
Tssr121226 206 bp upstream
 SNP A/G G G A A G G G G A G A G G G
rs29243587
MGI SNP Detail		 Chr13:117386927 Emb within coordinates of
Tssr121226 195 bp upstream
 SNP C/G G G C G G G G G G G G G G C G
rs238511310
MGI SNP Detail		 Chr13:117386933 Emb within coordinates of
Tssr121226 189 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs29730133
MGI SNP Detail		 Chr13:117386938 Emb within coordinates of
Tssr121226 184 bp upstream
 SNP A/G A A G A A A G
rs29222818
MGI SNP Detail		 Chr13:117386949 Emb within coordinates of
Tssr121226 173 bp upstream
 SNP A/G G G A G G G A
rs241230892
MGI SNP Detail		 Chr13:117386950 Emb within coordinates of
Tssr121226 172 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30541006
MGI SNP Detail		 Chr13:117386984 Emb within coordinates of
Tssr121226 138 bp upstream
 SNP A/G G G A A G G G G A G G A G
rs29626208
MGI SNP Detail		 Chr13:117387004 Emb within coordinates of
Tssr121226 118 bp upstream
 SNP C/T C C T C C C C C C C C C C T C C T T C
rs48833959
MGI SNP Detail		 Chr13:117387085 Emb within coordinates of
Tssr121226 37 bp upstream
 SNP A/G G A A G
rs29929850
MGI SNP Detail		 Chr13:117387108 Emb within coordinates of
Tssr121226 14 bp upstream
 SNP C/T T T C T T T C
rs224612215
MGI SNP Detail		 Chr13:117387117 Emb within coordinates of
Tssr121226 5 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs243856641
MGI SNP Detail		 Chr13:117387147 Emb within coordinates of
Tssr121226 5 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs214486594
MGI SNP Detail		 Chr13:117387204 Emb within coordinates of
Tssr121226 62 bp downstream
 SNP A/C C A A C A A A A A A A A A A A A A A A A C A C C A A C A A A C A A A A A A C A A A C A A C C C A A A
rs232958833
MGI SNP Detail		 Chr13:117387208 Emb within coordinates of
Tssr121226 66 bp downstream
 SNP A/C C A A C A A A A A A A A A A A A A A A A C A C C A A C C A A A C A A A A A A C A A A C A A A C A A A
rs579614143
MGI SNP Detail		 Chr13:117387344 Emb within coordinates of
Tssr121226 202 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C
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Showing SNP(s) 1 - 59 of 59
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory