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Mouse SNP Summary
Symbol
Name
ID 		Tssr121322
transcription start site region 121322
MGI:6049089

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Showing SNP(s) 1 - 64 of 64

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231538045
MGI SNP Detail		 Chr13:5912505 Klf6 within coordinates of
Rr387905 within coordinates of
Tssr121322 1867 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T G
rs251025398
MGI SNP Detail		 Chr13:5912622 Klf6 within coordinates of
Tssr121322 1750 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs258832233
MGI SNP Detail		 Chr13:5912689 Klf6 within coordinates of
Tssr121322 1683 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs224640637
MGI SNP Detail		 Chr13:5912710 Klf6 within coordinates of
Tssr121322 1662 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs584871866
MGI SNP Detail		 Chr13:5912761 Klf6 within coordinates of
Tssr121322 1611 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs579129054
MGI SNP Detail		 Chr13:5912762 Klf6 within coordinates of
Tssr121322 1610 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs582848982
MGI SNP Detail		 Chr13:5912763 Klf6 within coordinates of
Tssr121322 1609 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs584252697
MGI SNP Detail		 Chr13:5912764 Klf6 within coordinates of
Tssr121322 1608 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs242462268
MGI SNP Detail		 Chr13:5912814 Klf6 within coordinates of
Tssr121322 1558 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214510990
MGI SNP Detail		 Chr13:5912842 Klf6 within coordinates of
Tssr121322 1530 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs230260718
MGI SNP Detail		 Chr13:5912916 Klf6 within coordinates of
Tssr121322 1456 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs253542037
MGI SNP Detail		 Chr13:5913073 Klf6 within coordinates of
Tssr121322 1299 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs249069566
MGI SNP Detail		 Chr13:5913101 Klf6 within coordinates of
Tssr121322 1271 bp downstream
 SNP A/C C A
rs266098623
MGI SNP Detail		 Chr13:5913191 Klf6 within coordinates of
Tssr121322 1181 bp downstream
 SNP A/G A G
rs240611705
MGI SNP Detail		 Chr13:5913341 Klf6 within coordinates of
Tssr121322 1031 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T G T T T T T T T T T T T T T T G T T T T
rs254753690
MGI SNP Detail		 Chr13:5913356 Klf6 within coordinates of
Tssr121322 1016 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs213157471
MGI SNP Detail		 Chr13:5913382 Klf6 within coordinates of
Tssr121322 990 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T
rs233137098
MGI SNP Detail		 Chr13:5913542 Klf6 within coordinates of
Tssr121322 830 bp downstream
 SNP A/G A G
rs249350143
MGI SNP Detail		 Chr13:5913685 Klf6 within coordinates of
Tssr121322 687 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G C C
rs223042081
MGI SNP Detail		 Chr13:5913899 Klf6 within coordinates of
Tssr121322 473 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237585559
MGI SNP Detail		 Chr13:5913961 Klf6 within coordinates of
Tssr121322 411 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs259447621
MGI SNP Detail		 Chr13:5914016 Klf6 within coordinates of
Tssr121322 356 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs258206807
MGI SNP Detail		 Chr13:5914053 Klf6 within coordinates of
Tssr121322 319 bp downstream
 SNP C/T C T
rs224220573
MGI SNP Detail		 Chr13:5914191 Klf6 within coordinates of
Tssr121322 181 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
rs241533934
MGI SNP Detail		 Chr13:5914264 Klf6 within coordinates of
Tssr121322 108 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs215310163
MGI SNP Detail		 Chr13:5914275 Klf6 within coordinates of
Tssr121322 97 bp downstream
 SNP A/T A T
rs218539881
MGI SNP Detail		 Chr13:5914289 Klf6 within coordinates of
Tssr121322 83 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G T G G G G
rs231817145
MGI SNP Detail		 Chr13:5914434 Klf6 within coordinates of
Tssr121322 32 bp upstream
 SNP A/G A G
rs265327102
MGI SNP Detail		 Chr13:5914587 Klf6 within coordinates of
Rr403559 within coordinates of
Tssr121322 185 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs230055133
MGI SNP Detail		 Chr13:5914743 Klf6 within coordinates of
Rr403559 within coordinates of
Tssr121322 341 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs258294371
MGI SNP Detail		 Chr13:5915156 Klf6 within coordinates of
Tssr121322 754 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs13470634
MGI SNP Detail		 Chr13:5915303 Klf6 within coordinates of
Tssr121322 901 bp upstream
 SNP G/T T G
rs235799107
MGI SNP Detail		 Chr13:5915386 Klf6 within coordinates of
Tssr121322 984 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs212702241
MGI SNP Detail		 Chr13:5915419 Klf6 within coordinates of
Tssr121322 1017 bp upstream
 SNP C/G C G
rs213176162
MGI SNP Detail		 Chr13:5915420 Klf6 within coordinates of
Tssr121322 1018 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229724709
MGI SNP Detail		 Chr13:5915423 Klf6 within coordinates of
Tssr121322 1021 bp upstream
 SNP C/T T C
rs261137403
MGI SNP Detail		 Chr13:5915432 Klf6 within coordinates of
Tssr121322 1030 bp upstream
 SNP A/G G A
rs214826963
MGI SNP Detail		 Chr13:5915452 Klf6 within coordinates of
Tssr121322 1050 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226512420
MGI SNP Detail		 Chr13:5915456 Klf6 within coordinates of
Tssr121322 1054 bp upstream
 SNP C/T C T
rs263189445
MGI SNP Detail		 Chr13:5915468 Klf6 within coordinates of
Tssr121322 1066 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T G T T T T T T G T T T T T T T T T T T T T T T T T G
rs50966685
MGI SNP Detail		 Chr13:5915570 Klf6 within coordinates of
Tssr121322 1168 bp upstream
 SNP A/G G G G G G G A G G A A A G A A G A
rs235204104
MGI SNP Detail		 Chr13:5915647 Klf6 within coordinates of
Tssr121322 1245 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs252595574
MGI SNP Detail		 Chr13:5915658 Klf6 within coordinates of
Tssr121322 1256 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs218572375
MGI SNP Detail		 Chr13:5915668 Klf6 within coordinates of
Tssr121322 1266 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs235734464
MGI SNP Detail		 Chr13:5915721 Klf6 within coordinates of
Tssr121322 1319 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262866602
MGI SNP Detail		 Chr13:5915739 Klf6 within coordinates of
Tssr121322 1337 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs49371981
MGI SNP Detail		 Chr13:5915744 Klf6 within coordinates of
Tssr121322 1342 bp upstream
 SNP A/G A A A A A A A A A A A A A G
rs222393781
MGI SNP Detail		 Chr13:5915790 Klf6 within coordinates of
Tssr121322 1388 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs49489607
MGI SNP Detail		 Chr13:5915805 Klf6 within coordinates of
Tssr121322 1403 bp upstream
 SNP C/T C C C C C C T C C C C C C
rs263080089
MGI SNP Detail		 Chr13:5915835 Klf6 within coordinates of
Tssr121322 1433 bp upstream
 SNP C/T T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229263506
MGI SNP Detail		 Chr13:5915840 Klf6 within coordinates of
Tssr121322 1438 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248393170
MGI SNP Detail		 Chr13:5915850 Klf6 within coordinates of
Tssr121322 1448 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A
rs257088067
MGI SNP Detail		 Chr13:5915888 Klf6 within coordinates of
Tssr121322 1486 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs224481048
MGI SNP Detail		 Chr13:5915904 Klf6 within coordinates of
Tssr121322 1502 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs256650187
MGI SNP Detail		 Chr13:5915906 Klf6 within coordinates of
Tssr121322 1504 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs214138269
MGI SNP Detail		 Chr13:5915929 Klf6 within coordinates of
Tssr121322 1527 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs237809449
MGI SNP Detail		 Chr13:5916068 Klf6 within coordinates of
Tssr121322 1666 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs252892138
MGI SNP Detail		 Chr13:5916081 Klf6 within coordinates of
Tssr121322 1679 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G A
rs215789963
MGI SNP Detail		 Chr13:5916088 Klf6 within coordinates of
Tssr121322 1686 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T
rs234824246
MGI SNP Detail		 Chr13:5916119 Klf6 within coordinates of
Tssr121322 1717 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs49931795
MGI SNP Detail		 Chr13:5916130 Klf6 within coordinates of
Tssr121322 1728 bp upstream
 SNP A/G G G G G G G A G G A G A A G
rs212827143
MGI SNP Detail		 Chr13:5916255 Klf6 within coordinates of
Tssr121322 1853 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs229964696
MGI SNP Detail		 Chr13:5916319 Klf6 within coordinates of
Tssr121322 1917 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs262410595
MGI SNP Detail		 Chr13:5916366 Klf6 within coordinates of
Tssr121322 1964 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
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Showing SNP(s) 1 - 64 of 64
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory