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Mouse SNP Summary
Symbol
Name
ID
Tssr122438
transcription start site region 122438
MGI:6050205

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Showing SNP(s) 1 - 56 of 56

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs252502211
MGI SNP Detail
Chr13:49299464 Rr281364 within coordinates of
Tssr122438 1943 bp downstream
Wnk2 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs226577364
MGI SNP Detail
Chr13:49299719 Rr281364 within coordinates of
Tssr122438 1688 bp downstream
Wnk2 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T
rs243939470
MGI SNP Detail
Chr13:49299801 Cpgi5579 within coordinates of
Rr281364 within coordinates of
Tssr122438 1606 bp downstream
Wnk2 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs256231752
MGI SNP Detail
Chr13:49299960 Cpgi5579 within coordinates of
Rr281364 within coordinates of
Tssr122438 1447 bp downstream
Wnk2 within coordinates of
SNP G/T T T T T G T T T T T T T T T T T T T T G T T G T T G T G T T T T T G T G T T T T T T T G G T T T G T G T G
rs222123768
MGI SNP Detail
Chr13:49300009 Cpgi5579 within coordinates of
Rr281364 within coordinates of
Tssr122438 1398 bp downstream
Wnk2 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G
rs239370531
MGI SNP Detail
Chr13:49300014 Cpgi5579 within coordinates of
Rr281364 within coordinates of
Tssr122438 1393 bp downstream
Wnk2 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs258828814
MGI SNP Detail
Chr13:49300085 Cpgi5579 within coordinates of
Rr281364 within coordinates of
Tssr122438 1322 bp downstream
Wnk2 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C
rs227865463
MGI SNP Detail
Chr13:49300103 Cpgi5579 within coordinates of
Rr281364 within coordinates of
Tssr122438 1304 bp downstream
Wnk2 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G
rs241802124
MGI SNP Detail
Chr13:49300343 Cpgi5579 within coordinates of
Rr281364 within coordinates of
Tssr122438 1064 bp downstream
Wnk2 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs266206236
MGI SNP Detail
Chr13:49300352 Cpgi5579 within coordinates of
Rr281364 within coordinates of
Tssr122438 1055 bp downstream
Wnk2 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs228038943
MGI SNP Detail
Chr13:49300380 Cpgi5579 within coordinates of
Rr281364 within coordinates of
Tssr122438 1027 bp downstream
Wnk2 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254578082
MGI SNP Detail
Chr13:49300618 Cpgi5579 within coordinates of
Rr281364 within coordinates of
Tssr122438 789 bp downstream
Wnk2 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214244975
MGI SNP Detail
Chr13:49300648 Cpgi5579 within coordinates of
Rr281364 within coordinates of
Tssr122438 759 bp downstream
Wnk2 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs226477187
MGI SNP Detail
Chr13:49300736 Cpgi5579 within coordinates of
Rr281364 within coordinates of
Tssr122438 671 bp downstream
Wnk2 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs585272790
MGI SNP Detail
Chr13:49300799 Cpgi5579 within coordinates of
Rr281364 within coordinates of
Tssr122438 608 bp downstream
Wnk2 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs245335020
MGI SNP Detail
Chr13:49300885 Cpgi5579 within coordinates of
Rr281364 within coordinates of
Tssr122438 522 bp downstream
Wnk2 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216004890
MGI SNP Detail
Chr13:49300957 Cpgi5579 within coordinates of
Rr281364 within coordinates of
Tssr122438 450 bp downstream
Wnk2 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs234497227
MGI SNP Detail
Chr13:49300998 Cpgi5579 within coordinates of
Rr281364 within coordinates of
Tssr122438 409 bp downstream
Wnk2 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261037916
MGI SNP Detail
Chr13:49301363 Cpgi5579 within coordinates of
Rr281364 within coordinates of
Tssr122438 44 bp downstream
Wnk2 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A A A A A A A A G A A A A
rs212499711
MGI SNP Detail
Chr13:49301607 Cpgi5579 within coordinates of
Rr281364 within coordinates of
Tssr122438 94 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs234532866
MGI SNP Detail
Chr13:49301625 Cpgi5579 within coordinates of
Rr281364 within coordinates of
Tssr122438 112 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A A A A A A A A A T A A A A
rs261479331
MGI SNP Detail
Chr13:49301702 Cpgi5579 within coordinates of
Rr281364 within coordinates of
Tssr122438 189 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T
rs222544298
MGI SNP Detail
Chr13:49301724 Cpgi5579 within coordinates of
Rr281364 within coordinates of
Tssr122438 211 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239690641
MGI SNP Detail
Chr13:49301789 Cpgi5579 within coordinates of
Rr281364 within coordinates of
Tssr122438 276 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs252461901
MGI SNP Detail
Chr13:49301829 Cpgi5579 within coordinates of
Rr281364 within coordinates of
Tssr122438 316 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs221502417
MGI SNP Detail
Chr13:49301838 Cpgi5579 within coordinates of
Rr281364 within coordinates of
Tssr122438 325 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241772710
MGI SNP Detail
Chr13:49301926 Cpgi5579 within coordinates of
Rr281364 within coordinates of
Tssr122438 413 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs264300790
MGI SNP Detail
Chr13:49301939 Cpgi5579 within coordinates of
Rr281364 within coordinates of
Tssr122438 426 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs227910555
MGI SNP Detail
Chr13:49301977 Cpgi5579 within coordinates of
Rr281364 within coordinates of
Tssr122438 464 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242497656
MGI SNP Detail
Chr13:49301994 Rr281364 within coordinates of
Tssr122438 481 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A A A A A A A A A G A A A A
rs265157107
MGI SNP Detail
Chr13:49302160 Tssr122438 647 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs226405601
MGI SNP Detail
Chr13:49302165 Tssr122438 652 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs245615251
MGI SNP Detail
Chr13:49302193 Tssr122438 680 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215970283
MGI SNP Detail
Chr13:49302266 Tssr122438 753 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A A A A A A A A A C A A A A
rs228492224
MGI SNP Detail
Chr13:49302348 Tssr122438 835 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260323175
MGI SNP Detail
Chr13:49302396 Tssr122438 883 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T
rs212185121
MGI SNP Detail
Chr13:49302429 Tssr122438 916 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T T T T T T T T T T T T T T T T A T T T T
rs237436156
MGI SNP Detail
Chr13:49302483 Tssr122438 970 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs256097257
MGI SNP Detail
Chr13:49302553 Tssr122438 1040 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A
rs213538041
MGI SNP Detail
Chr13:49302626 Tssr122438 1113 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232743201
MGI SNP Detail
Chr13:49302630 Tssr122438 1117 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs252828660
MGI SNP Detail
Chr13:49302638 Tssr122438 1125 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221864825
MGI SNP Detail
Chr13:49302717 Tssr122438 1204 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs239149999
MGI SNP Detail
Chr13:49302763 Tssr122438 1250 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264057600
MGI SNP Detail
Chr13:49302784 Tssr122438 1271 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs220097289
MGI SNP Detail
Chr13:49302837 Tssr122438 1324 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244763820
MGI SNP Detail
Chr13:49302848 Tssr122438 1335 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T T T T T T T T T C T T T C
rs262493718
MGI SNP Detail
Chr13:49302858 Tssr122438 1345 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs220295787
MGI SNP Detail
Chr13:49302915 Tssr122438 1402 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T T T T T T T T T T T T T T
rs579584962
MGI SNP Detail
Chr13:49302955 Tssr122438 1442 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs239526319
MGI SNP Detail
Chr13:49303075 Tssr122438 1562 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs583641587
MGI SNP Detail
Chr13:49303230 Tssr122438 1717 bp upstream
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs258484193
MGI SNP Detail
Chr13:49303250 Tssr122438 1737 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A A A A A A A A A T A A A A
rs228879276
MGI SNP Detail
Chr13:49303323 Tssr122438 1810 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T T T T T T T T T C T T T
rs254771275
MGI SNP Detail
Chr13:49303399 Tssr122438 1886 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G
rs264671617
MGI SNP Detail
Chr13:49303486 Tssr122438 1973 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
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Showing SNP(s) 1 - 56 of 56

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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory