About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Tssr122709
transcription start site region 122709
MGI:6050476

<< first < prev1 next > last >>
Showing SNP(s) 1 - 48 of 48

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs225073324
MGI SNP Detail		 Chr13:55658202 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 1950 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs50495629
MGI SNP Detail		 Chr13:55658204 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 1948 bp downstream
 SNP C/G C C C G
rs215814895
MGI SNP Detail		 Chr13:55658209 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 1943 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs46016641
MGI SNP Detail		 Chr13:55658230 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 1922 bp downstream
 SNP A/C A A C
rs258735780
MGI SNP Detail		 Chr13:55658238 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 1914 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216980941
MGI SNP Detail		 Chr13:55658418 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 1734 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48992245
MGI SNP Detail		 Chr13:55658446 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 1706 bp downstream
 SNP C/T C C C T
rs249923059
MGI SNP Detail		 Chr13:55658497 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 1655 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs219095957
MGI SNP Detail		 Chr13:55658750 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 1402 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs238347511
MGI SNP Detail		 Chr13:55658759 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 1393 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs258031791
MGI SNP Detail		 Chr13:55658783 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 1369 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs224295140
MGI SNP Detail		 Chr13:55658806 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 1346 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs246459098
MGI SNP Detail		 Chr13:55658871 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 1281 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs258996966
MGI SNP Detail		 Chr13:55658949 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 1203 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222632512
MGI SNP Detail		 Chr13:55658978 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 1174 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs235813104
MGI SNP Detail		 Chr13:55659034 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 1118 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs254543658
MGI SNP Detail		 Chr13:55659061 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 1091 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs225142452
MGI SNP Detail		 Chr13:55659094 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 1058 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs256066456
MGI SNP Detail		 Chr13:55659315 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 837 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs263043130
MGI SNP Detail		 Chr13:55659347 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 805 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs232720801
MGI SNP Detail		 Chr13:55659419 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 733 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C C A C C C C C C C C C C C C
rs253593045
MGI SNP Detail		 Chr13:55659468 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 684 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs217077431
MGI SNP Detail		 Chr13:55659486 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 666 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs236800624
MGI SNP Detail		 Chr13:55659601 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 551 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243867063
MGI SNP Detail		 Chr13:55659683 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 469 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213201746
MGI SNP Detail		 Chr13:55659688 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 464 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs49188145
MGI SNP Detail		 Chr13:55659742 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 410 bp downstream
 SNP A/G G G G A
rs48316106
MGI SNP Detail		 Chr13:55659828 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 324 bp downstream
 SNP C/T T T C
rs224344453
MGI SNP Detail		 Chr13:55659871 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 281 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241195923
MGI SNP Detail		 Chr13:55660015 Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 137 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs252700749
MGI SNP Detail		 Chr13:55660385 Cpgi5676 within coordinates of
Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 220 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222755513
MGI SNP Detail		 Chr13:55660394 Cpgi5676 within coordinates of
Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 229 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C C C C C C C C G C C C C C C C C C C C
rs235875388
MGI SNP Detail		 Chr13:55660395 Cpgi5676 within coordinates of
Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 230 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs254598172
MGI SNP Detail		 Chr13:55660445 Cpgi5676 within coordinates of
Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 280 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs221966688
MGI SNP Detail		 Chr13:55660910 Cpgi5676 within coordinates of
Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 745 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs243925539
MGI SNP Detail		 Chr13:55661064 Cpgi5676 within coordinates of
Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 899 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs265448328
MGI SNP Detail		 Chr13:55661075 Cpgi5676 within coordinates of
Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 910 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs232151923
MGI SNP Detail		 Chr13:55661222 Cpgi5676 within coordinates of
Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 1057 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs241778468
MGI SNP Detail		 Chr13:55661225 Cpgi5676 within coordinates of
Pdlim7 within coordinates of
Rr281453 within coordinates of
Tssr122709 1060 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G T G
rs261044782
MGI SNP Detail		 Chr13:55661535 Cpgi5676 within coordinates of
Rr281453 within coordinates of
Tssr122709 1370 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs223909242
MGI SNP Detail		 Chr13:55661604 Rr281453 within coordinates of
Tssr122709 1439 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs243878651
MGI SNP Detail		 Chr13:55661684 Rr281453 within coordinates of
Tssr122709 1519 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213213827
MGI SNP Detail		 Chr13:55661694 Rr281453 within coordinates of
Tssr122709 1529 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs230555032
MGI SNP Detail		 Chr13:55661977 Rr281453 within coordinates of
Tssr122709 1812 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs251745259
MGI SNP Detail		 Chr13:55662009 Tssr122709 1844 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs216488646
MGI SNP Detail		 Chr13:55662023 Tssr122709 1858 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238873705
MGI SNP Detail		 Chr13:55662090 Tssr122709 1925 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs252744388
MGI SNP Detail		 Chr13:55662129 Tssr122709 1964 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A A A A A A A
<< first < prev1 next > last >>
Showing SNP(s) 1 - 48 of 48
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
Building initial tooltip...