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Mouse SNP Summary
Symbol
Name
ID 		Tssr123874
transcription start site region 123874
MGI:6051641

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs248953921
MGI SNP Detail		 Chr13:103469155 Gm61201 within coordinates of
Mast4 within coordinates of
Tssr123874 1782 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs211995902
MGI SNP Detail		 Chr13:103469172 Gm61201 within coordinates of
Mast4 within coordinates of
Tssr123874 1765 bp downstream
 SNP A/T A T
rs233146468
MGI SNP Detail		 Chr13:103469209 Gm61201 within coordinates of
Mast4 within coordinates of
Tssr123874 1728 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs578681510
MGI SNP Detail		 Chr13:103469238 Gm61201 within coordinates of
Mast4 within coordinates of
Tssr123874 1699 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251077981
MGI SNP Detail		 Chr13:103469336 Gm61201 within coordinates of
Mast4 within coordinates of
Tssr123874 1601 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs29922896
MGI SNP Detail		 Chr13:103469429 Gm61201 within coordinates of
Mast4 within coordinates of
Tssr123874 1508 bp downstream
 SNP C/G C C G C C
rs29570496
MGI SNP Detail		 Chr13:103469430 Gm61201 within coordinates of
Mast4 within coordinates of
Tssr123874 1507 bp downstream
 SNP C/G C C G C C
rs243317361
MGI SNP Detail		 Chr13:103469434 Gm61201 within coordinates of
Mast4 within coordinates of
Tssr123874 1503 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G
rs216894741
MGI SNP Detail		 Chr13:103469447 Gm61201 within coordinates of
Mast4 within coordinates of
Tssr123874 1490 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G T G T G G G G G G G G G G G G
rs29224259
MGI SNP Detail		 Chr13:103469471 Gm61201 within coordinates of
Mast4 within coordinates of
Tssr123874 1466 bp downstream
 SNP A/G G G A G G
rs262750863
MGI SNP Detail		 Chr13:103469578 Gm61201 within coordinates of
Mast4 within coordinates of
Tssr123874 1359 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs29509578
MGI SNP Detail		 Chr13:103469614 Mast4 within coordinates of
Tssr123874 1323 bp downstream
 SNP A/G G G A G G
rs237644761
MGI SNP Detail		 Chr13:103469639 Mast4 within coordinates of
Tssr123874 1298 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29509058
MGI SNP Detail		 Chr13:103469693 Mast4 within coordinates of
Tssr123874 1244 bp downstream
 SNP A/G A A G A A
rs29724869
MGI SNP Detail		 Chr13:103469810 Cpgi6053 within coordinates of
Mast4 within coordinates of
Tssr123874 1127 bp downstream
 SNP A/C C C A C C
rs237971205
MGI SNP Detail		 Chr13:103469837 Cpgi6053 within coordinates of
Mast4 within coordinates of
Tssr123874 1100 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs254291698
MGI SNP Detail		 Chr13:103469842 Cpgi6053 within coordinates of
Mast4 within coordinates of
Tssr123874 1095 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs223327323
MGI SNP Detail		 Chr13:103469846 Cpgi6053 within coordinates of
Mast4 within coordinates of
Tssr123874 1091 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242946910
MGI SNP Detail		 Chr13:103469914 Cpgi6053 within coordinates of
Mast4 within coordinates of
Tssr123874 1023 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs265537950
MGI SNP Detail		 Chr13:103469940 Cpgi6053 within coordinates of
Mast4 within coordinates of
Tssr123874 997 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A
rs232499258
MGI SNP Detail		 Chr13:103469977 Cpgi6053 within coordinates of
Mast4 within coordinates of
Tssr123874 960 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs246031975
MGI SNP Detail		 Chr13:103470022 Cpgi6053 within coordinates of
Mast4 within coordinates of
Tssr123874 915 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs262980342
MGI SNP Detail		 Chr13:103470137 Cpgi6053 within coordinates of
Mast4 within coordinates of
Tssr123874 800 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs223882136
MGI SNP Detail		 Chr13:103470267 Cpgi6053 within coordinates of
Mast4 within coordinates of
Tssr123874 670 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A G A G A A A A A A A A A A A A
rs243391338
MGI SNP Detail		 Chr13:103470268 Cpgi6053 within coordinates of
Mast4 within coordinates of
Tssr123874 669 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G A G A G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs216927868
MGI SNP Detail		 Chr13:103470376 Cpgi6053 within coordinates of
Mast4 within coordinates of
Tssr123874 561 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T A T A T T T T T T T T T T T T
rs229432567
MGI SNP Detail		 Chr13:103470380 Cpgi6053 within coordinates of
Mast4 within coordinates of
Tssr123874 557 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C T C T C C C C C C C C C C C C
rs252094043
MGI SNP Detail		 Chr13:103470392 Cpgi6053 within coordinates of
Mast4 within coordinates of
Tssr123874 545 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216887172
MGI SNP Detail		 Chr13:103470622 Cpgi6053 within coordinates of
Mast4 within coordinates of
Tssr123874 315 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A G A G A A A A A A A G A A A A
rs235898836
MGI SNP Detail		 Chr13:103470851 Cpgi6053 within coordinates of
Mast4 within coordinates of
Rr485330 within coordinates of
Tssr123874 86 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262254122
MGI SNP Detail		 Chr13:103470899 Cpgi6053 within coordinates of
Mast4 within coordinates of
Rr485330 within coordinates of
Tssr123874 38 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A
rs211716550
MGI SNP Detail		 Chr13:103470925 Cpgi6053 within coordinates of
Mast4 within coordinates of
Rr485330 within coordinates of
Tssr123874 12 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230585584
MGI SNP Detail		 Chr13:103470927 Cpgi6053 within coordinates of
Mast4 within coordinates of
Rr485330 within coordinates of
Tssr123874 10 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254333137
MGI SNP Detail		 Chr13:103470950 Cpgi6053 within coordinates of
Mast4 within coordinates of
Rr485330 within coordinates of
Tssr123874 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs223362886
MGI SNP Detail		 Chr13:103471051 Cpgi6053 within coordinates of
Rr485330 within coordinates of
Tssr123874 43 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247652627
MGI SNP Detail		 Chr13:103471194 Cpgi6053 within coordinates of
Rr485330 within coordinates of
Tssr123874 186 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs258856679
MGI SNP Detail		 Chr13:103471208 Cpgi6053 within coordinates of
Rr485330 within coordinates of
Tssr123874 200 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs225410775
MGI SNP Detail		 Chr13:103471222 Cpgi6053 within coordinates of
Rr485330 within coordinates of
Tssr123874 214 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A C A C A A A A A A A C A A A A
rs243265679
MGI SNP Detail		 Chr13:103471283 Cpgi6053 within coordinates of
Rr485330 within coordinates of
Tssr123874 275 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs265310892
MGI SNP Detail		 Chr13:103471284 Cpgi6053 within coordinates of
Rr485330 within coordinates of
Tssr123874 276 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs223534407
MGI SNP Detail		 Chr13:103471335 Cpgi6053 within coordinates of
Gm61190 within coordinates of
Rr485330 within coordinates of
Tssr123874 327 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A A A A A A A A A A A A A A T A A A A A A A T A A A A
rs237079572
MGI SNP Detail		 Chr13:103471348 Cpgi6053 within coordinates of
Gm61190 within coordinates of
Rr485330 within coordinates of
Tssr123874 340 bp upstream
 SNP A/C/T A A A A A A A A A A A A A A A A A A A C A A C A A A A T A A A A A T A A A A T A C A A A A A A A C A A A A
rs29229954
MGI SNP Detail		 Chr13:103471355 Cpgi6053 within coordinates of
Gm61190 within coordinates of
Rr485330 within coordinates of
Tssr123874 347 bp upstream
 SNP C/T C C T T T C
rs229508867
MGI SNP Detail		 Chr13:103471371 Cpgi6053 within coordinates of
Gm61190 within coordinates of
Rr485330 within coordinates of
Tssr123874 363 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs257578779
MGI SNP Detail		 Chr13:103471376 Cpgi6053 within coordinates of
Gm61190 within coordinates of
Rr485330 within coordinates of
Tssr123874 368 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs263467552
MGI SNP Detail		 Chr13:103471377 Cpgi6053 within coordinates of
Gm61190 within coordinates of
Rr485330 within coordinates of
Tssr123874 369 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229965985
MGI SNP Detail		 Chr13:103471434 Cpgi6053 within coordinates of
Gm61190 within coordinates of
Rr485330 within coordinates of
Tssr123874 426 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G G G G G G G G T G G G G G G G G G G G G
rs251263645
MGI SNP Detail		 Chr13:103471435 Cpgi6053 within coordinates of
Gm61190 within coordinates of
Rr485330 within coordinates of
Tssr123874 427 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A A A
rs211753257
MGI SNP Detail		 Chr13:103471467 Cpgi6053 within coordinates of
Gm61190 within coordinates of
Tssr123874 459 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G
rs230264337
MGI SNP Detail		 Chr13:103471519 Cpgi6053 within coordinates of
Gm61190 within coordinates of
Tssr123874 511 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs248033474
MGI SNP Detail		 Chr13:103471523 Cpgi6053 within coordinates of
Gm61190 within coordinates of
Tssr123874 515 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217380318
MGI SNP Detail		 Chr13:103471586 Gm61190 within coordinates of
Tssr123874 578 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237788307
MGI SNP Detail		 Chr13:103471664 Gm61190 within coordinates of
Tssr123874 656 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs263263339
MGI SNP Detail		 Chr13:103471665 Gm61190 within coordinates of
Tssr123874 657 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs222406837
MGI SNP Detail		 Chr13:103471721 Gm61190 within coordinates of
Tssr123874 713 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29571204
MGI SNP Detail		 Chr13:103471725 Gm61190 within coordinates of
Tssr123874 717 bp upstream
 SNP A/G A A A G G G A
rs29239497
MGI SNP Detail		 Chr13:103471881 Gm61190 within coordinates of
Tssr123874 873 bp upstream
 SNP A/T T T A A A T
rs218065629
MGI SNP Detail		 Chr13:103472060 Gm61190 within coordinates of
Tssr123874 1052 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs236756751
MGI SNP Detail		 Chr13:103472081 Gm61190 within coordinates of
Tssr123874 1073 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs259464358
MGI SNP Detail		 Chr13:103472205 Gm61190 within coordinates of
Tssr123874 1197 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs227592886
MGI SNP Detail		 Chr13:103472260 Gm61190 within coordinates of
Tssr123874 1252 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265790383
MGI SNP Detail		 Chr13:103472484 Rr485331 within coordinates of
Tssr123874 1476 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230280745
MGI SNP Detail		 Chr13:103472496 Rr485331 within coordinates of
Tssr123874 1488 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256009263
MGI SNP Detail		 Chr13:103472530 Rr485331 within coordinates of
Tssr123874 1522 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs255819270
MGI SNP Detail		 Chr13:103472795 Rr485331 within coordinates of
Tssr123874 1787 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T
rs224707865
MGI SNP Detail		 Chr13:103472831 Rr485331 within coordinates of
Tssr123874 1823 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs585061980
MGI SNP Detail		 Chr13:103472863 Rr485331 within coordinates of
Tssr123874 1855 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs579372017
MGI SNP Detail		 Chr13:103472882 Rr485331 within coordinates of
Tssr123874 1874 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs247686705
MGI SNP Detail		 Chr13:103472895 Rr485331 within coordinates of
Tssr123874 1887 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 69 of 69
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory