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Mouse SNP Summary
Symbol
Name
ID 		Tssr125502
transcription start site region 125502
MGI:6053269

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Showing SNP(s) 1 - 69 of 69

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs48863040
MGI SNP Detail		 Chr14:54041960 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Rr492108 within coordinates of
Tcra within coordinates of
Tssr125502 1994 bp upstream
 SNP T T T T T
rs50012302
MGI SNP Detail		 Chr14:54041999 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Rr492108 within coordinates of
Tcra within coordinates of
Tssr125502 1955 bp upstream
 SNP T T T T T
rs50834830
MGI SNP Detail		 Chr14:54042035 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Rr492108 within coordinates of
Tcra within coordinates of
Tssr125502 1919 bp upstream
 SNP A/G G G A G
rs47638293
MGI SNP Detail		 Chr14:54042036 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Rr492108 within coordinates of
Tcra within coordinates of
Tssr125502 1918 bp upstream
 SNP A/G A A G A
rs49685339
MGI SNP Detail		 Chr14:54042066 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Rr492108 within coordinates of
Tcra within coordinates of
Tssr125502 1888 bp upstream
 SNP G G G
rs51144354
MGI SNP Detail		 Chr14:54042071 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Rr492108 within coordinates of
Tcra within coordinates of
Tssr125502 1883 bp upstream
 SNP T T T
rs52178983
MGI SNP Detail		 Chr14:54042086 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Rr492108 within coordinates of
Tcra within coordinates of
Tssr125502 1868 bp upstream
 SNP A/C A A A C
rs52231593
MGI SNP Detail		 Chr14:54042108 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Rr492108 within coordinates of
Tcra within coordinates of
Tssr125502 1846 bp upstream
 SNP G G G G G
rs52525535
MGI SNP Detail		 Chr14:54042152 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 1802 bp upstream
 SNP T T T T T
rs52365347
MGI SNP Detail		 Chr14:54042227 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 1727 bp upstream
 SNP C/G C G
rs52179074
MGI SNP Detail		 Chr14:54042235 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 1719 bp upstream
 SNP A A A
rs47920581
MGI SNP Detail		 Chr14:54042290 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 1664 bp upstream
 SNP A/T A A A A A A A A A A T A A A A
rs49407803
MGI SNP Detail		 Chr14:54042325 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 1629 bp upstream
 SNP C/T C C C C C C T T C T C
rs48431789
MGI SNP Detail		 Chr14:54042331 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 1623 bp upstream
 SNP A/G A A G A
rs49146580
MGI SNP Detail		 Chr14:54042393 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 1561 bp upstream
 SNP C/T T T T C
rs46268226
MGI SNP Detail		 Chr14:54042398 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 1556 bp upstream
 SNP T T T
rs49702900
MGI SNP Detail		 Chr14:54042413 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 1541 bp upstream
 SNP A/G G G A G
rs45947517
MGI SNP Detail		 Chr14:54042419 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 1535 bp upstream
 SNP T T T
rs46258974
MGI SNP Detail		 Chr14:54042428 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 1526 bp upstream
 SNP G G G
rs48617155
MGI SNP Detail		 Chr14:54042430 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 1524 bp upstream
 SNP G G G
rs3160878
MGI SNP Detail		 Chr14:54042446 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 1508 bp upstream
 SNP A/C C C C A
rs3160879
MGI SNP Detail		 Chr14:54042492 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 1462 bp upstream
 SNP T T T T T
rs3160880
MGI SNP Detail		 Chr14:54042644 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 1310 bp upstream
 SNP G G
rs50541246
MGI SNP Detail		 Chr14:54042665 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 1289 bp upstream
 SNP C C C
rs51036834
MGI SNP Detail		 Chr14:54043029 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 925 bp upstream
 SNP C/T T T T T T T T T T T C T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs46754429
MGI SNP Detail		 Chr14:54043043 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 911 bp upstream
 SNP A/G G G G G G G G G G A G G G G G
rs48598084
MGI SNP Detail		 Chr14:54043063 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 891 bp upstream
 SNP G/T T T T T T T T T T G G T T T T T
rs48868645
MGI SNP Detail		 Chr14:54043101 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 853 bp upstream
 SNP A/T T A T
rs47164189
MGI SNP Detail		 Chr14:54043110 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 844 bp upstream
 SNP A A
rs46557180
MGI SNP Detail		 Chr14:54043120 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 834 bp upstream
 SNP G G
rs47618942
MGI SNP Detail		 Chr14:54043126 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 828 bp upstream
 SNP T T
rs45786555
MGI SNP Detail		 Chr14:54043140 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 814 bp upstream
 SNP C/T C C T T C C
rs46154143
MGI SNP Detail		 Chr14:54043146 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 808 bp upstream
 SNP A A A A A
rs51542024
MGI SNP Detail		 Chr14:54043228 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 726 bp upstream
 SNP A A A A A
rs50597166
MGI SNP Detail		 Chr14:54043246 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 708 bp upstream
 SNP A A A A A
rs50534861
MGI SNP Detail		 Chr14:54043306 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 648 bp upstream
 SNP C/T C C C C C C C C C T C C C C
rs47955141
MGI SNP Detail		 Chr14:54043312 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 642 bp upstream
 SNP C/T C C C C C C C C C T C C C C
rs50602018
MGI SNP Detail		 Chr14:54043341 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 613 bp upstream
 SNP G/T T T T T T T T T T T G T T T
rs50330387
MGI SNP Detail		 Chr14:54043350 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 604 bp upstream
 SNP A/G G G G A G G G G A G G G G
rs50070457
MGI SNP Detail		 Chr14:54043425 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 529 bp upstream
 SNP A/T A T T T T T A T T
rs47880530
MGI SNP Detail		 Chr14:54043461 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 493 bp upstream
 SNP A A A A A
rs261789487
MGI SNP Detail		 Chr14:54043490 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 464 bp upstream
 SNP A/G G A
rs48279687
MGI SNP Detail		 Chr14:54043532 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 422 bp upstream
 SNP C C C C C
rs48642509
MGI SNP Detail		 Chr14:54043536 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 418 bp upstream
 SNP C C C C C
rs51797786
MGI SNP Detail		 Chr14:54043695 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Rr492110 within coordinates of
Tcra within coordinates of
Tssr125502 259 bp upstream
 SNP A A A A A A
rs51729978
MGI SNP Detail		 Chr14:54043715 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Rr492110 within coordinates of
Tcra within coordinates of
Tssr125502 239 bp upstream
 SNP A A A A A
rs49795502
MGI SNP Detail		 Chr14:54043755 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Rr492110 within coordinates of
Tcra within coordinates of
Tssr125502 199 bp upstream
 SNP G G G G G G
rs47923864
MGI SNP Detail		 Chr14:54043783 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Rr492110 within coordinates of
Tcra within coordinates of
Tssr125502 171 bp upstream
 SNP A/T A A A A A A A A A A T A A A A A
rs49650390
MGI SNP Detail		 Chr14:54043818 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Rr492110 within coordinates of
Tcra within coordinates of
Tssr125502 136 bp upstream
 SNP A A A A
rs49036990
MGI SNP Detail		 Chr14:54043824 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Rr492110 within coordinates of
Tcra within coordinates of
Tssr125502 130 bp upstream
 SNP C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs51492374
MGI SNP Detail		 Chr14:54043834 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Rr492110 within coordinates of
Tcra within coordinates of
Tssr125502 120 bp upstream
 SNP A A A
rs51900609
MGI SNP Detail		 Chr14:54043840 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Rr492110 within coordinates of
Tcra within coordinates of
Tssr125502 114 bp upstream
 SNP C/G G C G
rs45996561
MGI SNP Detail		 Chr14:54043930 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Rr492110 within coordinates of
Tcra within coordinates of
Tssr125502 24 bp upstream
 SNP C C C C C C
rs49454048
MGI SNP Detail		 Chr14:54043935 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Rr492110 within coordinates of
Tcra within coordinates of
Tssr125502 19 bp upstream
 SNP G/T G G G G G G G G G G T G G G G G
rs47914986
MGI SNP Detail		 Chr14:54043986 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Rr492110 within coordinates of
Tcra within coordinates of
Tssr125502 9 bp downstream
 SNP A/G A A A A A A A A A A A A G A A A A A
rs46677516
MGI SNP Detail		 Chr14:54044039 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Rr492110 within coordinates of
Tcra within coordinates of
Tssr125502 62 bp downstream
 SNP C/T T T T T T T T T T T T T C T T T T T
rs47086411
MGI SNP Detail		 Chr14:54044103 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Rr492110 within coordinates of
Tcra within coordinates of
Trav17 within coordinates of
Tssr125502 126 bp downstream
 SNP C/T T T T T T T T T T T T C T T T T
rs3156936
MGI SNP Detail		 Chr14:54044248 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Trav17 within coordinates of
Tssr125502 271 bp downstream
 SNP A/G G G G G G G G G G G A G
rs3156937
MGI SNP Detail		 Chr14:54044257 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Trav17 within coordinates of
Tssr125502 280 bp downstream
 SNP A/G G G G G G G G G G G A G G G G G
rs3160881
MGI SNP Detail		 Chr14:54044318 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Trav17 within coordinates of
Tssr125502 341 bp downstream
 SNP C/T C C C C C C T C C C C C
rs3156938
MGI SNP Detail		 Chr14:54044329 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Trav17 within coordinates of
Tssr125502 352 bp downstream
 SNP A/C A A A A A A A A A A C A A A A A
rs3140340
MGI SNP Detail		 Chr14:54044451 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Trav17 within coordinates of
Tssr125502 474 bp downstream
 SNP A/G G G G G G G G G G G G A G G G G G
rs51196708
MGI SNP Detail		 Chr14:54044694 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 717 bp downstream
 SNP C/G C C C C C C G C C C C C C C C
rs3140341
MGI SNP Detail		 Chr14:54044793 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 816 bp downstream
 SNP A/C A A A A A A A C A C A A C C A A C C
rs3140342
MGI SNP Detail		 Chr14:54044821 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 844 bp downstream
 SNP C/G G G G G G G G C G G G G G C G G G G G
rs3140343
MGI SNP Detail		 Chr14:54044975 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 998 bp downstream
 SNP C/T T T T T T T T C T T T T C T T T T T
rs3155281
MGI SNP Detail		 Chr14:54045415 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 1438 bp downstream
 SNP C/T C C C C C C C T C C C C T C C C C C
rs3153357
MGI SNP Detail		 Chr14:54045496 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 1519 bp downstream
 SNP C/T T T T T T T C T T T T C T T T T T
rs3140344
MGI SNP Detail		 Chr14:54045910 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Tcra within coordinates of
Tssr125502 1933 bp downstream
 SNP A/G A A G
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Showing SNP(s) 1 - 69 of 69
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory