About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Tssr125530
transcription start site region 125530
MGI:6053297

<< first < prev1 next > last >>
Showing SNP(s) 1 - 35 of 35

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs3153542
MGI SNP Detail
Chr14:54357415 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 1917 bp upstream
SNP A/G G G A G G A G
rs3155464
MGI SNP Detail
Chr14:54357855 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 1477 bp upstream
SNP A/G A A A A A G G A A A A G G A A A A A
rs48543585
MGI SNP Detail
Chr14:54357926 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 1406 bp upstream
SNP A/C C C C C C C A C C C C C C C C
rs49291745
MGI SNP Detail
Chr14:54358253 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 1079 bp upstream
SNP C/T C C C C C T C C C C C C C C
rs3153543
MGI SNP Detail
Chr14:54358325 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 1007 bp upstream
SNP A/G A A G A A A
rs46034919
MGI SNP Detail
Chr14:54358880 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 452 bp upstream
SNP A/T A A A A A A T A A A A T A T
rs47745077
MGI SNP Detail
Chr14:54358997 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 335 bp upstream
SNP A/G G G G G G A G G G G G G G G
rs45658873
MGI SNP Detail
Chr14:54359091 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 241 bp upstream
SNP A/G G G G G G G A G G G G G G G G
rs45861669
MGI SNP Detail
Chr14:54359143 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 189 bp upstream
SNP C/T T T T T T T C T T T T T T T T
rs3155465
MGI SNP Detail
Chr14:54359177 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 155 bp upstream
SNP A/G A A A A A G A A A A A G A A A A A
rs3155466
MGI SNP Detail
Chr14:54359301 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 31 bp upstream
SNP A/G G G G G G A G G G G G A G G G G G
rs3155467
MGI SNP Detail
Chr14:54359391 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 30 bp downstream
Tssr125532 within coordinates of
SNP G/T T T T T T T G T T T G T T T G
rs3153544
MGI SNP Detail
Chr14:54359432 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 71 bp downstream
SNP C/T C C C C C T T C C C C T C C C C C
rs3153545
MGI SNP Detail
Chr14:54359621 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 260 bp downstream
Tssr125536 within coordinates of
SNP C/T C C C C C C T C C C C C T C C C C C
rs3153546
MGI SNP Detail
Chr14:54359865 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 504 bp downstream
SNP G/T T T T T T T G G T T T T G T T T T T
rs3153547
MGI SNP Detail
Chr14:54359937 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 576 bp downstream
SNP C/T T T T T T T C T T T T T C T T T T T
rs3153548
MGI SNP Detail
Chr14:54359942 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 581 bp downstream
SNP A/T A T A A A
rs3155468
MGI SNP Detail
Chr14:54360074 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 713 bp downstream
SNP A/G A A A A A A A G G A A A A G A A A A A
rs3155469
MGI SNP Detail
Chr14:54360160 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 799 bp downstream
SNP A/G G G G G G G G A A G G G G A G G G G G
rs3153549
MGI SNP Detail
Chr14:54360189 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 828 bp downstream
SNP C/T C C C C C C C T T C C C C T C C C C C
rs3153550
MGI SNP Detail
Chr14:54360447 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 1086 bp downstream
SNP C/T T T T T T T T C C T T T T C T T T T T
rs3153551
MGI SNP Detail
Chr14:54360506 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 1145 bp downstream
SNP A/C C C C C C C C A A C C C C A C C C C C
rs51050259
MGI SNP Detail
Chr14:54360585 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 1224 bp downstream
Tssr125539 within coordinates of
SNP A/G A A A A A A A A A A A A G A G
rs48584643
MGI SNP Detail
Chr14:54360756 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 1395 bp downstream
SNP A/G G G G G G G A G G G G G G G G
rs241777954
MGI SNP Detail
Chr14:54360919 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 1558 bp downstream
SNP A/G G A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs259347498
MGI SNP Detail
Chr14:54360923 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 1562 bp downstream
SNP A/G G A
rs52351166
MGI SNP Detail
Chr14:54360956 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 1595 bp downstream
SNP G/T T T T T T T T T T T T G T T T T T
rs249453355
MGI SNP Detail
Chr14:54361030 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 1669 bp downstream
SNP A A A
rs48623125
MGI SNP Detail
Chr14:54361038 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 1677 bp downstream
SNP A/G G G G G G G G G G G G A G G G G G
rs48689773
MGI SNP Detail
Chr14:54361072 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 1711 bp downstream
Tssr128533 within coordinates of
SNP A/G G G G G G G A G G G G G G G
rs47105690
MGI SNP Detail
Chr14:54361079 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 1718 bp downstream
Tssr128533 within coordinates of
SNP C/G G G G G G G G G G G C G G G G G
rs50584009
MGI SNP Detail
Chr14:54361109 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 1748 bp downstream
SNP A/C A A A A A C A A C A A C A A
rs50080737
MGI SNP Detail
Chr14:54361115 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 1754 bp downstream
SNP A/G A A A A A A G A A A A G A G A G
rs45973371
MGI SNP Detail
Chr14:54361212 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 1851 bp downstream
SNP G/T G G G G G G T G G G G G G G G
rs3155470
MGI SNP Detail
Chr14:54361315 A430107P09Rik within coordinates of
A630038E17Rik within coordinates of
Gm30275 within coordinates of
Tcra within coordinates of
Tcrd within coordinates of
Tssr125530 1954 bp downstream
SNP C/T C C C C C C C C C C C T C C C C C
<< first < prev1 next > last >>
Showing SNP(s) 1 - 35 of 35

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
12/10/2024
MGI 6.24
The Jackson Laboratory