About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Tssr125566
transcription start site region 125566
MGI:6053333

<< first < prev1 next > last >>
Showing SNP(s) 1 - 61 of 61

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs31385390
MGI SNP Detail		 Chr14:54411444 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1987 bp upstream
 SNP A/C A A A A A A A C C A A A A C A C A A C
rs49528033
MGI SNP Detail		 Chr14:54411456 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1975 bp upstream
 SNP A/G G G G G G G G G G G G G A G A
rs30582868
MGI SNP Detail		 Chr14:54411581 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1850 bp upstream
 SNP A/G A A A A A A A G G A A A A G A G A A G
rs51704355
MGI SNP Detail		 Chr14:54411616 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1815 bp upstream
 SNP T T T T T T
rs31331896
MGI SNP Detail		 Chr14:54411635 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1796 bp upstream
 SNP A/G G G A G G G
rs31194345
MGI SNP Detail		 Chr14:54411650 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1781 bp upstream
 SNP C/T C C T C C T C C C C
rs48218791
MGI SNP Detail		 Chr14:54411680 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1751 bp upstream
 SNP G/T G G G G T G T
rs50455229
MGI SNP Detail		 Chr14:54411704 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1727 bp upstream
 SNP A A A A
rs48050007
MGI SNP Detail		 Chr14:54411707 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1724 bp upstream
 SNP A/G G G G A G
rs48857808
MGI SNP Detail		 Chr14:54411750 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1681 bp upstream
 SNP A A A A
rs47211850
MGI SNP Detail		 Chr14:54411758 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1673 bp upstream
 SNP A A A A
rs46001852
MGI SNP Detail		 Chr14:54411765 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1666 bp upstream
 SNP C C C C
rs51379742
MGI SNP Detail		 Chr14:54411788 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1643 bp upstream
 SNP A/G A A A A G
rs49849469
MGI SNP Detail		 Chr14:54411790 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1641 bp upstream
 SNP C/T C T C
rs51430886
MGI SNP Detail		 Chr14:54411792 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1639 bp upstream
 SNP A/G G G G G G G G G G G G A G G G A G
rs227484351
MGI SNP Detail		 Chr14:54411831 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1600 bp upstream
 SNP G/T G T
rs46895414
MGI SNP Detail		 Chr14:54411874 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1557 bp upstream
 SNP T T T T
rs49687639
MGI SNP Detail		 Chr14:54411899 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1532 bp upstream
 SNP A/C A A A A A C C A A
rs51720407
MGI SNP Detail		 Chr14:54411929 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1502 bp upstream
 SNP A/G G G G G G G G G G G G G A G G G G G
rs46071101
MGI SNP Detail		 Chr14:54411962 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1469 bp upstream
 SNP G/T G G G G G G G G G G G G T G G G G G
rs49834606
MGI SNP Detail		 Chr14:54411977 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1454 bp upstream
 SNP A/G A A A A A A A A A A A A G A A A A A
rs30898303
MGI SNP Detail		 Chr14:54412147 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1284 bp upstream
 SNP C/G G C G G
rs30167365
MGI SNP Detail		 Chr14:54412152 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1279 bp upstream
 SNP C/T T C T T C C T
rs30177904
MGI SNP Detail		 Chr14:54412164 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1267 bp upstream
 SNP A/G G A G G A G G
rs31329664
MGI SNP Detail		 Chr14:54412243 A430107P09Rik within coordinates of
Tcra within coordinates of
Traj43 within coordinates of
Tssr125566 1188 bp upstream
 SNP A/T A A A A A A A T A A A A A T A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs50384796
MGI SNP Detail		 Chr14:54412281 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1150 bp upstream
 SNP A/G G G G G G G G G G G G A G G G G G
rs49303471
MGI SNP Detail		 Chr14:54412466 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 965 bp upstream
 SNP G G G G G
rs51027818
MGI SNP Detail		 Chr14:54412476 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 955 bp upstream
 SNP A/G G G G G G G G G G G G G A G G G G G
rs52328680
MGI SNP Detail		 Chr14:54412767 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 664 bp upstream
 SNP A/T A T T
rs52130840
MGI SNP Detail		 Chr14:54412769 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 662 bp upstream
 SNP A/G A A A A A A A A G A A A A
rs49800951
MGI SNP Detail		 Chr14:54412830 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 601 bp upstream
 SNP T T T T T T
rs46192238
MGI SNP Detail		 Chr14:54412831 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 600 bp upstream
 SNP A/G G G G G G G G G G G A G A G G
rs51418168
MGI SNP Detail		 Chr14:54412862 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 569 bp upstream
 SNP T T T T T T
rs48763629
MGI SNP Detail		 Chr14:54412933 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 498 bp upstream
 SNP C/T C C C C C C C C C C C C T C C C C C
rs50394520
MGI SNP Detail		 Chr14:54412993 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 438 bp upstream
 SNP G/T T T T T T T T T T T T G T T T T T
rs49298775
MGI SNP Detail		 Chr14:54413012 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 419 bp upstream
 SNP T T T T T T
rs30466001
MGI SNP Detail		 Chr14:54413411 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 20 bp upstream
 SNP C/T T T T T T T C T T T T T C T T T T T
rs30118765
MGI SNP Detail		 Chr14:54413431 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 within coordinates of
 SNP A/T T T T T T T A T T T T T A T T T T T
rs31426107
MGI SNP Detail		 Chr14:54413573 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 134 bp downstream
 SNP C/G C C C C C C G C C C C G C C C C C
rs31130705
MGI SNP Detail		 Chr14:54413666 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 227 bp downstream
Tssr125567 within coordinates of
 SNP G/T G G G G G G T G G G G G T G G G G G
rs31542877
MGI SNP Detail		 Chr14:54413894 A430107P09Rik within coordinates of
Rr492148 within coordinates of
Tcra within coordinates of
Tssr125566 455 bp downstream
 SNP A/G G G G G G G G A G G G G G A G G G G G
rs30731721
MGI SNP Detail		 Chr14:54413931 A430107P09Rik within coordinates of
Rr492148 within coordinates of
Tcra within coordinates of
Tssr125566 492 bp downstream
 SNP A/G A A G A A A
rs31518216
MGI SNP Detail		 Chr14:54414094 A430107P09Rik within coordinates of
Rr492148 within coordinates of
Tcra within coordinates of
Tssr125566 655 bp downstream
 SNP A/G G G G G G G G A G G G G G A G G G G
rs30644803
MGI SNP Detail		 Chr14:54414095 A430107P09Rik within coordinates of
Rr492148 within coordinates of
Tcra within coordinates of
Tssr125566 656 bp downstream
 SNP A/G G G G A G G G
rs49220326
MGI SNP Detail		 Chr14:54414159 A430107P09Rik within coordinates of
Rr492148 within coordinates of
Tcra within coordinates of
Tssr125566 720 bp downstream
 SNP C/T C C C C C C T C C C C C C C C
rs48431832
MGI SNP Detail		 Chr14:54414364 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 925 bp downstream
 SNP A/C C C C C C C C C C C C C A C A
rs30251995
MGI SNP Detail		 Chr14:54414377 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 938 bp downstream
 SNP G/T T T T T T T T G T T T T G T T T T T
rs30110820
MGI SNP Detail		 Chr14:54414391 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 952 bp downstream
 SNP C/T T T T T T T T C C T T T T C T T T T T
rs30891171
MGI SNP Detail		 Chr14:54414440 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1001 bp downstream
 SNP C/G G G G G C G G C G G
rs30553823
MGI SNP Detail		 Chr14:54414442 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1003 bp downstream
 SNP A/C A A A C A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs31143915
MGI SNP Detail		 Chr14:54414477 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1038 bp downstream
 SNP A/G G G G G G G G A G G G G G A G G G G G
rs50685823
MGI SNP Detail		 Chr14:54414497 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1058 bp downstream
 SNP A/T A A A A A A A T A A A A T A A A A A
rs50510346
MGI SNP Detail		 Chr14:54414576 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1137 bp downstream
 SNP G G G G G G
rs47862882
MGI SNP Detail		 Chr14:54414636 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1197 bp downstream
 SNP A/C C C C C C C C C C C C C A C A
rs46387016
MGI SNP Detail		 Chr14:54414700 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1261 bp downstream
 SNP A/G A A A G A A G A A A
rs46330314
MGI SNP Detail		 Chr14:54414719 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1280 bp downstream
 SNP G G G G G G
rs51440867
MGI SNP Detail		 Chr14:54414727 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1288 bp downstream
 SNP C/T T T T T T T T T T C C T T
rs49608919
MGI SNP Detail		 Chr14:54414839 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1400 bp downstream
 SNP C/T C C C C C C T C C C C C C C C
rs49788101
MGI SNP Detail		 Chr14:54414864 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1425 bp downstream
 SNP C/T C C C C C C T C C C C C C C C
rs47935515
MGI SNP Detail		 Chr14:54414961 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1522 bp downstream
 SNP A/G G G G G G G A G G G G G G G G
rs46428836
MGI SNP Detail		 Chr14:54415139 A430107P09Rik within coordinates of
Tcra within coordinates of
Tssr125566 1700 bp downstream
 SNP C/T C C C C C C C C C C C C T C T
<< first < prev1 next > last >>
Showing SNP(s) 1 - 61 of 61
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
Building initial tooltip...