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Mouse SNP Summary
Symbol
Name
ID 		Tssr125721
transcription start site region 125721
MGI:6053488

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs227316564
MGI SNP Detail		 Chr14:55204285 Myh6 within coordinates of
Rr407057 within coordinates of
Tssr125721 1973 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs8251308
MGI SNP Detail		 Chr14:55204449 Rr407057 within coordinates of
Tssr125721 1809 bp upstream
 SNP C/T C C C C C C T C C C
rs8251309
MGI SNP Detail		 Chr14:55204476 Rr407057 within coordinates of
Tssr125721 1782 bp upstream
 SNP A/C A A A A A C A A A
rs50241560
MGI SNP Detail		 Chr14:55204584 Rr407057 within coordinates of
Tssr125721 1674 bp upstream
 SNP A A A A A A
rs46923189
MGI SNP Detail		 Chr14:55204592 Rr407057 within coordinates of
Tssr125721 1666 bp upstream
 SNP C C C C C C
rs254240463
MGI SNP Detail		 Chr14:55204606 Rr407057 within coordinates of
Tssr125721 1652 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227290504
MGI SNP Detail		 Chr14:55204640 Rr407057 within coordinates of
Tssr125721 1618 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253491862
MGI SNP Detail		 Chr14:55204643 Rr407057 within coordinates of
Tssr125721 1615 bp upstream
 SNP C/T T C C T T T T T T T T T T C
rs49759179
MGI SNP Detail		 Chr14:55204669 Rr407057 within coordinates of
Tssr125721 1589 bp upstream
 SNP A A A A A A
rs49797888
MGI SNP Detail		 Chr14:55204738 Rr407057 within coordinates of
Tssr125721 1520 bp upstream
 SNP A A A A A
rs47659114
MGI SNP Detail		 Chr14:55204745 Rr407057 within coordinates of
Tssr125721 1513 bp upstream
 SNP A A A A A
rs51106668
MGI SNP Detail		 Chr14:55204783 Rr407057 within coordinates of
Tssr125721 1475 bp upstream
 SNP C/T T T T T T T T T T T T C T T T T T
rs46463800
MGI SNP Detail		 Chr14:55204880 Rr407057 within coordinates of
Tssr125721 1378 bp upstream
 SNP A/T T T T T T T A T T T T T T T T
rs252069390
MGI SNP Detail		 Chr14:55205336 Tssr125721 922 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212145194
MGI SNP Detail		 Chr14:55205363 Tssr125721 895 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31385494
MGI SNP Detail		 Chr14:55205365 Tssr125721 893 bp upstream
 SNP C/T T T T C T T T
rs258078656
MGI SNP Detail		 Chr14:55205371 Tssr125721 887 bp upstream
 SNP A A A
rs30978085
MGI SNP Detail		 Chr14:55205473 Tssr125721 785 bp upstream
Tssr128748 within coordinates of
 SNP A/G A A A A A A A G A A A A A G A A A A A
rs50581065
MGI SNP Detail		 Chr14:55205645 Tssr125721 613 bp upstream
 SNP A/G G G G G G G G G G G G A G G G G G
rs252079717
MGI SNP Detail		 Chr14:55205750 Tssr125721 508 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs31291668
MGI SNP Detail		 Chr14:55205759 Tssr125721 499 bp upstream
 SNP C/T T T C T T T
rs46598027
MGI SNP Detail		 Chr14:55205760 Tssr125721 498 bp upstream
 SNP C/G G G G G G G G G G G C G G G G
rs30698940
MGI SNP Detail		 Chr14:55205789 Tssr125721 469 bp upstream
 SNP A/G A A A A A A G A A A A A G A A A A A
rs229652294
MGI SNP Detail		 Chr14:55205933 Tssr125721 325 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs241828312
MGI SNP Detail		 Chr14:55205975 Tssr125721 283 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs48436779
MGI SNP Detail		 Chr14:55206024 Tssr125721 234 bp upstream
 SNP A/G A A A A A A A A A A A G A A A A A
rs49642666
MGI SNP Detail		 Chr14:55206250 Mhrt within coordinates of
Tssr125720 within coordinates of
Tssr125721 8 bp upstream
 SNP A/G G G G G G G G G G G G G A G G G G G
rs246295026
MGI SNP Detail		 Chr14:55206316 Mhrt within coordinates of
Tssr125721 47 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215683081
MGI SNP Detail		 Chr14:55206317 Mhrt within coordinates of
Tssr125721 48 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs225648819
MGI SNP Detail		 Chr14:55206319 Mhrt within coordinates of
Tssr125721 50 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245569808
MGI SNP Detail		 Chr14:55206358 Mhrt within coordinates of
Tssr125721 89 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212041793
MGI SNP Detail		 Chr14:55206386 Mhrt within coordinates of
Tssr125721 117 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs237197432
MGI SNP Detail		 Chr14:55206387 Mhrt within coordinates of
Tssr125721 118 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs47001342
MGI SNP Detail		 Chr14:55206402 Mhrt within coordinates of
Tssr125721 133 bp downstream
 SNP C/G C C C C C C C C C C G C C C
rs253875152
MGI SNP Detail		 Chr14:55206439 Mhrt within coordinates of
Tssr125721 170 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs219219295
MGI SNP Detail		 Chr14:55206444 Mhrt within coordinates of
Tssr125721 175 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51363124
MGI SNP Detail		 Chr14:55206472 Mhrt within coordinates of
Tssr125721 203 bp downstream
 SNP A/G G G G G G G G A G G G G A
rs232914470
MGI SNP Detail		 Chr14:55206526 Mhrt within coordinates of
Tssr125721 257 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs252112289
MGI SNP Detail		 Chr14:55206625 Mhrt within coordinates of
Tssr125721 356 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs583212728
MGI SNP Detail		 Chr14:55206636 Mhrt within coordinates of
Tssr125721 367 bp downstream
 SNP A/C C A A C C C C C C C A A C C A C A A A
rs250686355
MGI SNP Detail		 Chr14:55206647 Mhrt within coordinates of
Tssr125721 378 bp downstream
 SNP C/T C C T C C T T T T T T T C T T C T C C C
rs264604234
MGI SNP Detail		 Chr14:55206666 Mhrt within coordinates of
Tssr125721 397 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs223205807
MGI SNP Detail		 Chr14:55206782 Mhrt within coordinates of
Tssr125721 513 bp downstream
Tssr125724 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240157719
MGI SNP Detail		 Chr14:55206798 Mhrt within coordinates of
Tssr125721 529 bp downstream
Tssr125724 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50622516
MGI SNP Detail		 Chr14:55206818 Mhrt within coordinates of
Tssr125721 549 bp downstream
 SNP C/T C C C C C C T C C C C C C C C
rs225507985
MGI SNP Detail		 Chr14:55206833 Mhrt within coordinates of
Tssr125721 564 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251408122
MGI SNP Detail		 Chr14:55206838 Mhrt within coordinates of
Tssr125721 569 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs50167231
MGI SNP Detail		 Chr14:55206878 Mhrt within coordinates of
Tssr125721 609 bp downstream
 SNP G G G G G
rs50978054
MGI SNP Detail		 Chr14:55206914 Mhrt within coordinates of
Tssr125721 645 bp downstream
 SNP G G G G G
rs50659876
MGI SNP Detail		 Chr14:55206932 Mhrt within coordinates of
Tssr125721 663 bp downstream
 SNP G/T G G G G G G G G G G G T G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs51697846
MGI SNP Detail		 Chr14:55206994 Mhrt within coordinates of
Tssr125721 725 bp downstream
 SNP C/T C C C C C C T C C C C T C C C C C
rs232925236
MGI SNP Detail		 Chr14:55207001 Mhrt within coordinates of
Tssr125721 732 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs30603566
MGI SNP Detail		 Chr14:55207053 Mhrt within coordinates of
Tssr125721 784 bp downstream
 SNP C/T C C C C C C T C C C C C T C C C C C
rs213829511
MGI SNP Detail		 Chr14:55207054 Mhrt within coordinates of
Tssr125721 785 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232316783
MGI SNP Detail		 Chr14:55207087 Mhrt within coordinates of
Tssr125721 818 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs46346186
MGI SNP Detail		 Chr14:55207113 Mhrt within coordinates of
Tssr125721 844 bp downstream
 SNP C/G C C C C C C G C C C C C C C C
rs221479760
MGI SNP Detail		 Chr14:55207140 Mhrt within coordinates of
Tssr125721 871 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31501842
MGI SNP Detail		 Chr14:55207189 Mhrt within coordinates of
Tssr125721 920 bp downstream
 SNP C/T C T C C C
rs264433003
MGI SNP Detail		 Chr14:55207198 Mhrt within coordinates of
Tssr125721 929 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221323245
MGI SNP Detail		 Chr14:55207238 Mhrt within coordinates of
Tssr125721 969 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C A C C C C
rs30631149
MGI SNP Detail		 Chr14:55207260 Mhrt within coordinates of
Tssr125721 991 bp downstream
 SNP C/T C C C C C C T C T T C C T T C C C T
rs30898521
MGI SNP Detail		 Chr14:55207311 Mhrt within coordinates of
Tssr125721 1042 bp downstream
 SNP A/G G G G G G G A G A A G G A A G G G A
rs219272700
MGI SNP Detail		 Chr14:55207334 Mhrt within coordinates of
Tssr125721 1065 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50472106
MGI SNP Detail		 Chr14:55207345 Mhrt within coordinates of
Tssr125721 1076 bp downstream
 SNP C/T C C C C C C C C C C T C C C C
rs50385334
MGI SNP Detail		 Chr14:55207616 Mhrt within coordinates of
Tssr125721 1347 bp downstream
 SNP A/G G G G G G G G A A G G A G G A
rs261322386
MGI SNP Detail		 Chr14:55207631 Mhrt within coordinates of
Tssr125721 1362 bp downstream
Tssr125725 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31115116
MGI SNP Detail		 Chr14:55207653 Mhrt within coordinates of
Tssr125721 1384 bp downstream
Tssr125726 within coordinates of
 SNP C/T C C C C C C C T C C C C C T C C C C C
rs30989528
MGI SNP Detail		 Chr14:55207657 Mhrt within coordinates of
Tssr125721 1388 bp downstream
Tssr125726 within coordinates of
 SNP A/T A A A T A A
rs30947050
MGI SNP Detail		 Chr14:55207677 Mhrt within coordinates of
Tssr125721 1408 bp downstream
 SNP A/G A A A G A A
rs31378917
MGI SNP Detail		 Chr14:55207686 Mhrt within coordinates of
Tssr125721 1417 bp downstream
Tssr125727 within coordinates of
 SNP C/T T T T T T T T C C C T T C C T T C
rs245945632
MGI SNP Detail		 Chr14:55207777 Mhrt within coordinates of
Tssr125721 1508 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213750332
MGI SNP Detail		 Chr14:55207789 Mhrt within coordinates of
Tssr125721 1520 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226155401
MGI SNP Detail		 Chr14:55207804 Mhrt within coordinates of
Tssr125721 1535 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253059859
MGI SNP Detail		 Chr14:55207823 Mhrt within coordinates of
Tssr125721 1554 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs30621123
MGI SNP Detail		 Chr14:55207927 Mhrt within coordinates of
Tssr125721 1658 bp downstream
 SNP C/T T T T T T T T C T T T T T C T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs242417045
MGI SNP Detail		 Chr14:55208045 Mhrt within coordinates of
Tssr125721 1776 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs261077926
MGI SNP Detail		 Chr14:55208072 Mhrt within coordinates of
Tssr125721 1803 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31505577
MGI SNP Detail		 Chr14:55208110 Mhrt within coordinates of
Tssr125721 1841 bp downstream
 SNP A/G G G G G G G G A G G G G G A G G G G G
rs235203296
MGI SNP Detail		 Chr14:55208220 Mhrt within coordinates of
Myh7 within coordinates of
Tssr125721 1951 bp downstream
Tssr128756 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30807374
MGI SNP Detail		 Chr14:55208230 Mhrt within coordinates of
Myh7 within coordinates of
Tssr125721 1961 bp downstream
 SNP A/G A A A A A A G A A A A A G A A A A A
rs50535368
MGI SNP Detail		 Chr14:55208249 Mhrt within coordinates of
Myh7 within coordinates of
Tssr125721 1980 bp downstream
 SNP G/T T T T T T T T T T T T G T T T T T
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Showing SNP(s) 1 - 81 of 81
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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