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Mouse SNP Summary
Symbol
Name
ID 		Tssr125748
transcription start site region 125748
MGI:6053515

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Showing SNP(s) 1 - 69 of 69

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30845222
MGI SNP Detail		 Chr14:55291676 Cpgi6483 within coordinates of
Rr492410 within coordinates of
Tssr125748 1630 bp upstream
 SNP G/T G T G
rs225480383
MGI SNP Detail		 Chr14:55291854 Rr492410 within coordinates of
Tssr125748 1452 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs31028924
MGI SNP Detail		 Chr14:55291944 Rr492410 within coordinates of
Tssr125748 1362 bp upstream
 SNP G/T G G T G G G
rs31158016
MGI SNP Detail		 Chr14:55292200 Tssr125748 1106 bp upstream
 SNP C/T T T T C
rs221228196
MGI SNP Detail		 Chr14:55292288 Tssr125748 1018 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46479884
MGI SNP Detail		 Chr14:55292313 Tssr125748 993 bp upstream
 SNP G G
rs237432531
MGI SNP Detail		 Chr14:55292627 Rr492411 within coordinates of
Tssr125748 679 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs256117899
MGI SNP Detail		 Chr14:55292847 Rr492411 within coordinates of
Rr492412 within coordinates of
Tssr125748 459 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs30737395
MGI SNP Detail		 Chr14:55293038 Rr492413 within coordinates of
Tssr125748 268 bp upstream
 SNP C/T C C C T C C C
rs242188037
MGI SNP Detail		 Chr14:55293039 Rr492413 within coordinates of
Tssr125748 267 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs31304471
MGI SNP Detail		 Chr14:55293045 Rr492413 within coordinates of
Tssr125748 261 bp upstream
 SNP C/T T T T C T T T
rs30899952
MGI SNP Detail		 Chr14:55293113 Rr492413 within coordinates of
Tssr125748 193 bp upstream
 SNP C/T T T T C T T T
rs246558711
MGI SNP Detail		 Chr14:55293121 Rr492413 within coordinates of
Tssr125747 within coordinates of
Tssr125748 185 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31008939
MGI SNP Detail		 Chr14:55293133 Rr492413 within coordinates of
Tssr125747 within coordinates of
Tssr125748 173 bp upstream
 SNP C/G G G G C G G
rs225916082
MGI SNP Detail		 Chr14:55293155 Rr492413 within coordinates of
Tssr125748 151 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245998429
MGI SNP Detail		 Chr14:55293217 Rr492413 within coordinates of
Tssr125748 89 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212373659
MGI SNP Detail		 Chr14:55293301 Rr492413 within coordinates of
Tssr125748 5 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30358928
MGI SNP Detail		 Chr14:55293388 Rr492413 within coordinates of
Tssr125748 56 bp downstream
 SNP A/G G G G A A G G A A
rs254324598
MGI SNP Detail		 Chr14:55293396 Rr492413 within coordinates of
Tssr125748 64 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31087432
MGI SNP Detail		 Chr14:55293432 Rr492413 within coordinates of
Tssr125748 100 bp downstream
 SNP A/C C C C A C C C
rs31092948
MGI SNP Detail		 Chr14:55293458 Rr492413 within coordinates of
Tssr125748 126 bp downstream
 SNP A/T A A A T A A A
rs250899140
MGI SNP Detail		 Chr14:55293492 Rr492413 within coordinates of
Tssr125748 160 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215730915
MGI SNP Detail		 Chr14:55293526 Rr492413 within coordinates of
Tssr125748 194 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs30266884
MGI SNP Detail		 Chr14:55293660 Tssr125748 328 bp downstream
 SNP C/T T T C T T T
rs250244505
MGI SNP Detail		 Chr14:55293679 Tssr125748 347 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs220265407
MGI SNP Detail		 Chr14:55293708 Tssr125748 376 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs244864861
MGI SNP Detail		 Chr14:55293736 Tssr125748 404 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31256653
MGI SNP Detail		 Chr14:55293741 Tssr125748 409 bp downstream
 SNP C/T C C C T C C C
rs227060025
MGI SNP Detail		 Chr14:55293742 Tssr125748 410 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs240604928
MGI SNP Detail		 Chr14:55293745 Tssr125748 413 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs30565753
MGI SNP Detail		 Chr14:55293762 Tssr125748 430 bp downstream
 SNP C/T C C C T C C C
rs587175937
MGI SNP Detail		 Chr14:55293771 Tssr125748 439 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs30106180
MGI SNP Detail		 Chr14:55293819 Tssr125748 487 bp downstream
 SNP A/G G G G A G G G
rs30462126
MGI SNP Detail		 Chr14:55293838 Tssr125748 506 bp downstream
 SNP A/G A A G A A A
rs264695002
MGI SNP Detail		 Chr14:55293991 Tssr125748 659 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G A G A A G G G A G G A G G G A G G G A G G
rs229214771
MGI SNP Detail		 Chr14:55294002 Tssr125748 670 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs259434367
MGI SNP Detail		 Chr14:55294029 Tssr125748 697 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219769341
MGI SNP Detail		 Chr14:55294170 Tssr125748 838 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs30947260
MGI SNP Detail		 Chr14:55294265 Tssr125748 933 bp downstream
 SNP A/G A A G A A A
rs31090541
MGI SNP Detail		 Chr14:55294274 Tssr125748 942 bp downstream
 SNP C/T C C T C C C
rs30143717
MGI SNP Detail		 Chr14:55294290 Tssr125748 958 bp downstream
 SNP G/T T T G T T T
rs231119760
MGI SNP Detail		 Chr14:55294306 Tssr125748 974 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250306820
MGI SNP Detail		 Chr14:55294307 Tssr125748 975 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs211916658
MGI SNP Detail		 Chr14:55294331 Tssr125748 999 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235356068
MGI SNP Detail		 Chr14:55294332 Tssr125748 1000 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs263677093
MGI SNP Detail		 Chr14:55294379 Tssr125748 1047 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs247503881
MGI SNP Detail		 Chr14:55294410 Tssr125748 1078 bp downstream
 SNP A/T A T
rs226694066
MGI SNP Detail		 Chr14:55294462 Tssr125748 1130 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240526510
MGI SNP Detail		 Chr14:55294471 Tssr125748 1139 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253568932
MGI SNP Detail		 Chr14:55294554 Tssr125748 1222 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219667246
MGI SNP Detail		 Chr14:55294581 Tssr125748 1249 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239785770
MGI SNP Detail		 Chr14:55294596 Tssr125748 1264 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs48077778
MGI SNP Detail		 Chr14:55294656 Tssr125748 1324 bp downstream
 SNP C C C C
rs229398259
MGI SNP Detail		 Chr14:55294714 Tssr125748 1382 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247829799
MGI SNP Detail		 Chr14:55294750 Tssr125748 1418 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs266206656
MGI SNP Detail		 Chr14:55294757 Tssr125748 1425 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227069150
MGI SNP Detail		 Chr14:55294758 Tssr125748 1426 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs246348955
MGI SNP Detail		 Chr14:55294784 Tssr125748 1452 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs255803769
MGI SNP Detail		 Chr14:55294793 Tssr125748 1461 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs224982798
MGI SNP Detail		 Chr14:55294806 Tssr125748 1474 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs255809790
MGI SNP Detail		 Chr14:55294807 Tssr125748 1475 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs211849601
MGI SNP Detail		 Chr14:55294835 Tssr125748 1503 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236928506
MGI SNP Detail		 Chr14:55294852 Tssr125748 1520 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253825247
MGI SNP Detail		 Chr14:55294893 Tssr125748 1561 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs218984036
MGI SNP Detail		 Chr14:55294901 Tssr125748 1569 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233747711
MGI SNP Detail		 Chr14:55295051 Tssr125748 1719 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30796192
MGI SNP Detail		 Chr14:55295069 Tssr125748 1737 bp downstream
 SNP A/G G G G A A G A
rs219501357
MGI SNP Detail		 Chr14:55295073 Tssr125748 1741 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31353091
MGI SNP Detail		 Chr14:55295195 Tssr125748 1863 bp downstream
 SNP C/T C C C C T
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Showing SNP(s) 1 - 69 of 69
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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