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Mouse SNP Summary
Symbol
Name
ID
Tssr125903
transcription start site region 125903
MGI:6053670

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255394349
MGI SNP Detail
Alliance Variant
Chr14:59676045 Gm45935 Intron
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1976 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221160031
MGI SNP Detail
Alliance Variant
Chr14:59676056 Gm45935 Intron
Rr493048 within coordinates of
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1965 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246665971
MGI SNP Detail
Alliance Variant
Chr14:59676063 Gm45935 Intron
Rr493048 within coordinates of
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1958 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs265139887
MGI SNP Detail
Alliance Variant
Chr14:59676069 Gm45935 Intron
Rr493048 within coordinates of
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1952 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223777093
MGI SNP Detail
Alliance Variant
Chr14:59676078 Gm45935 Intron
Rr493048 within coordinates of
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1943 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244455840
MGI SNP Detail
Alliance Variant
Chr14:59676092 Gm45935 Intron
Rr493048 within coordinates of
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1929 bp upstream
SNP C/G/T C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C G C C C C
rs262161453
MGI SNP Detail
Alliance Variant
Chr14:59676093 Gm45935 Intron
Rr493048 within coordinates of
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1928 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A A A A A A A A A G A A A A
rs227962159
MGI SNP Detail
Alliance Variant
Chr14:59676129 Gm45935 Intron
Rr493048 within coordinates of
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1892 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247135483
MGI SNP Detail
Alliance Variant
Chr14:59676175 Gm45935 Intron
Rr493048 within coordinates of
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1846 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs36524670
MGI SNP Detail
Alliance Variant
Chr14:59676181 Gm45935 Intron
Rr493048 within coordinates of
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1840 bp upstream
SNP G/T G G T G G G G G G G T G G G G G
rs227350665
MGI SNP Detail
Alliance Variant
Chr14:59676182 Gm45935 Intron
Rr493048 within coordinates of
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1839 bp upstream
SNP A/C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C A C C C C C A C C C C C C C C C C C C C C T C C C C
rs250519606
MGI SNP Detail
Alliance Variant
Chr14:59676186 Gm45935 Intron
Rr493048 within coordinates of
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1835 bp upstream
SNP A/G/T A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs214966549
MGI SNP Detail
Alliance Variant
Chr14:59676208 Gm45935 Intron
Rr493048 within coordinates of
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1813 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227529839
MGI SNP Detail
Alliance Variant
Chr14:59676268 Gm45935 Intron
Rr493048 within coordinates of
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1753 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254101238
MGI SNP Detail
Alliance Variant
Chr14:59676272 Gm45935 Intron
Rr493048 within coordinates of
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1749 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216670672
MGI SNP Detail
Alliance Variant
Chr14:59676441 Gm45935 Intron
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1580 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236404392
MGI SNP Detail
Alliance Variant
Chr14:59676449 Gm45935 Intron
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1572 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255335954
MGI SNP Detail
Alliance Variant
Chr14:59676505 Gm45935 Intron
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1516 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs215288366
MGI SNP Detail
Alliance Variant
Chr14:59676510 Gm45935 Intron
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1511 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs241289021
MGI SNP Detail
Alliance Variant
Chr14:59676522 Gm45935 Intron
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1499 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257268790
MGI SNP Detail
Alliance Variant
Chr14:59676596 Gm45935 Intron
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1425 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223409749
MGI SNP Detail
Alliance Variant
Chr14:59676631 Gm45935 Intron
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1390 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241555978
MGI SNP Detail
Alliance Variant
Chr14:59676645 Gm45935 Intron
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1376 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs249235128
MGI SNP Detail
Alliance Variant
Chr14:59676666 Gm45935 Intron
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1355 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs222281136
MGI SNP Detail
Alliance Variant
Chr14:59676679 Gm45935 Intron
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1342 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs241950448
MGI SNP Detail
Alliance Variant
Chr14:59676685 Gm45935 Intron
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1336 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs256844106
MGI SNP Detail
Alliance Variant
Chr14:59676773 Gm45935 Intron
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1248 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227297610
MGI SNP Detail
Alliance Variant
Chr14:59676798 Gm45935 Intron
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1223 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245667818
MGI SNP Detail
Alliance Variant
Chr14:59676817 Gm45935 Intron
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1204 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G G G G G G G G G A G G G G
rs262674211
MGI SNP Detail
Alliance Variant
Chr14:59676902 Gm45935 Intron
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1119 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C A C C C C
rs37806296
MGI SNP Detail
Alliance Variant
Chr14:59676940 Gm45935 Intron
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1081 bp upstream
SNP A/G G G G G G G G G G G A G G G
rs36362385
MGI SNP Detail
Alliance Variant
Chr14:59676999 Gm45935 Intron
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 1022 bp upstream
SNP C/T T T T T T T T T T C T T T
rs37246149
MGI SNP Detail
Alliance Variant
Chr14:59677119 Gm45935 Intron
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 902 bp upstream
SNP C/T C C C C C C C C C C T C C C C
rs249762611
MGI SNP Detail
Alliance Variant
Chr14:59677266 Gm45935 Intron
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 755 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216609995
MGI SNP Detail
Alliance Variant
Chr14:59677432 Gm45935 Intron
Rr493049 within coordinates of
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 589 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229186784
MGI SNP Detail
Alliance Variant
Chr14:59677496 Gm45935 Intron
Rr493049 within coordinates of
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 525 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246471994
MGI SNP Detail
Alliance Variant
Chr14:59677616 Gm45935 Intron
Rr493049 within coordinates of
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 405 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A A A A A A A A A G A A A A
rs37675915
MGI SNP Detail
Alliance Variant
Chr14:59677662 Gm45935 Intron
Rr493049 within coordinates of
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 359 bp upstream
SNP A/T A A A A A A A A A A T A A A A
rs215226604
MGI SNP Detail
Alliance Variant
Chr14:59677720 Gm45935 Intron
Rr493049 within coordinates of
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 301 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs238760927
MGI SNP Detail
Alliance Variant
Chr14:59677722 Gm45935 Intron
Rr493049 within coordinates of
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 299 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224493979
MGI SNP Detail
Alliance Variant
Chr14:59677866 Gm45935 Intron
Rr493049 within coordinates of
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 155 bp upstream
SNP A/G G A
rs36665646
MGI SNP Detail
Alliance Variant
Chr14:59677944 Gm45935 Intron
Rr493049 within coordinates of
Setdb2 Intron
Setdb2 Noncoding-Transcript-Variant
Tssr125903 77 bp upstream
SNP G/T T T T T T T T T T T G T T T
rs214956954
MGI SNP Detail
Alliance Variant
Chr14:59678042 Cpgi6560 within coordinates of
Gm45935 mRNA-UTR
Rr493049 within coordinates of
Setdb2 mRNA-UTR
Setdb2 Noncoding-Transcript-Variant
Tssr125903 11 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236529506
MGI SNP Detail
Alliance Variant
Chr14:59678048 Cpgi6560 within coordinates of
Gm45935 mRNA-UTR
Rr493049 within coordinates of
Setdb2 mRNA-UTR
Setdb2 Noncoding-Transcript-Variant
Tssr125903 17 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C A C C C C
rs249149479
MGI SNP Detail
Alliance Variant
Chr14:59678066 Cpgi6560 within coordinates of
Gm45935 mRNA-UTR
Rr493049 within coordinates of
Setdb2 mRNA-UTR
Setdb2 Noncoding-Transcript-Variant
Tssr125903 35 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs222219509
MGI SNP Detail
Alliance Variant
Chr14:59678138 Cpgi6560 within coordinates of
Gm45935 mRNA-UTR
Rr493049 within coordinates of
Setdb2 mRNA-UTR
Setdb2 Noncoding-Transcript-Variant
Tssr125903 107 bp downstream
SNP C/T C C C C T C C C C T C C C C C C C C C C C C C C C C C C T T C C C C C T C C T C C C C C C C C C C C C
rs241889656
MGI SNP Detail
Alliance Variant
Chr14:59678146 Cpgi6560 within coordinates of
Gm45935 mRNA-UTR
Rr493049 within coordinates of
Setdb2 mRNA-UTR
Setdb2 Noncoding-Transcript-Variant
Tssr125903 115 bp downstream
SNP C/G G G G G C G G G G C G G G G G G G G G G G G G G G G G G C C G G G G G C G G C G G G G G G G G G G G
rs235421444
MGI SNP Detail
Alliance Variant
Chr14:59678161 Cpgi6560 within coordinates of
Gm45935 mRNA-UTR
Rr493049 within coordinates of
Setdb2 mRNA-UTR
Setdb2 Noncoding-Transcript-Variant
Tssr125903 130 bp downstream
SNP A/G G A
rs224741958
MGI SNP Detail
Alliance Variant
Chr14:59678166 Cpgi6560 within coordinates of
Gm45935 mRNA-UTR
Rr493049 within coordinates of
Setdb2 mRNA-UTR
Setdb2 Noncoding-Transcript-Variant
Tssr125903 135 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242751171
MGI SNP Detail
Alliance Variant
Chr14:59678172 Cpgi6560 within coordinates of
Gm45935 mRNA-UTR
Rr493049 within coordinates of
Setdb2 mRNA-UTR
Setdb2 Noncoding-Transcript-Variant
Tssr125903 141 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs265210536
MGI SNP Detail
Alliance Variant
Chr14:59678179 Cpgi6560 within coordinates of
Gm45935 mRNA-UTR
Rr493049 within coordinates of
Setdb2 mRNA-UTR
Setdb2 Noncoding-Transcript-Variant
Tssr125903 148 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs227399909
MGI SNP Detail
Alliance Variant
Chr14:59678223 Cpgi6560 within coordinates of
Gm45935 mRNA-UTR
Rr404137 within coordinates of
Rr493049 within coordinates of
Setdb2 mRNA-UTR
Setdb2 Noncoding-Transcript-Variant
Tssr125903 192 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36385345
MGI SNP Detail
Alliance Variant
Chr14:59678227 Cpgi6560 within coordinates of
Gm45935 mRNA-UTR
Rr404137 within coordinates of
Rr493049 within coordinates of
Setdb2 mRNA-UTR
Setdb2 Noncoding-Transcript-Variant
Tssr125903 196 bp downstream
SNP C/T T T T T T T C T T T C T T T
rs260504137
MGI SNP Detail
Alliance Variant
Chr14:59678238 Cpgi6560 within coordinates of
Gm45935 mRNA-UTR
Rr404137 within coordinates of
Rr493049 within coordinates of
Setdb2 mRNA-UTR
Setdb2 Noncoding-Transcript-Variant
Tssr125903 207 bp downstream
Tssr129008 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs6410626
MGI SNP Detail
Alliance Variant
Chr14:59678260 Cpgi6560 within coordinates of
Gm45935 mRNA-UTR
Rr404137 within coordinates of
Rr493049 within coordinates of
Setdb2 mRNA-UTR
Setdb2 Noncoding-Transcript-Variant
Tssr125903 229 bp downstream
Tssr129008 within coordinates of
SNP A/G G G G G G G G A A G G G G G G G
rs246405408
MGI SNP Detail
Alliance Variant
Chr14:59678306 Cpgi6560 within coordinates of
Gm45935 mRNA-UTR
Rr404137 within coordinates of
Rr493049 within coordinates of
Setdb2 mRNA-UTR
Setdb2 Noncoding-Transcript-Variant
Tssr125903 275 bp downstream
Tssr129008 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs6411218
MGI SNP Detail
Chr14:59678360 Cpgi6560 within coordinates of
Rr404137 within coordinates of
Rr493050 within coordinates of
Tssr125903 329 bp downstream
SNP C/T T C
rs259905728
MGI SNP Detail
Alliance Variant
Chr14:59678429 Cab39l mRNA-UTR
Cab39l Noncoding-Transcript-Variant
Cpgi6560 within coordinates of
Rr404137 within coordinates of
Rr493050 within coordinates of
Tssr125903 398 bp downstream
Tssr125904 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs233138664
MGI SNP Detail
Alliance Variant
Chr14:59678451 Cab39l mRNA-UTR
Cab39l Noncoding-Transcript-Variant
Cpgi6560 within coordinates of
Rr404137 within coordinates of
Rr493051 within coordinates of
Tssr125903 420 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs250784773
MGI SNP Detail
Alliance Variant
Chr14:59678537 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Cpgi6560 within coordinates of
Rr493051 within coordinates of
Tssr125903 506 bp downstream
Tssr129009 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215286884
MGI SNP Detail
Alliance Variant
Chr14:59678541 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Cpgi6560 within coordinates of
Rr493051 within coordinates of
Tssr125903 510 bp downstream
Tssr129009 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs234839500
MGI SNP Detail
Alliance Variant
Chr14:59678556 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Cpgi6560 within coordinates of
Rr493051 within coordinates of
Tssr125903 525 bp downstream
Tssr129010 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs243262866
MGI SNP Detail
Alliance Variant
Chr14:59678598 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Cpgi6560 within coordinates of
Rr493051 within coordinates of
Tssr125903 567 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G
rs30850694
MGI SNP Detail
Alliance Variant
Chr14:59678636 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Cpgi6560 within coordinates of
Rr493051 within coordinates of
Tssr125903 605 bp downstream
SNP C/T T T T C
rs6412976
MGI SNP Detail
Alliance Variant
Chr14:59678664 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Cpgi6560 within coordinates of
Rr493051 within coordinates of
Tssr125903 633 bp downstream
SNP G/T G T
rs6152119
MGI SNP Detail
Alliance Variant
Chr14:59678739 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Cpgi6560 within coordinates of
Rr493051 within coordinates of
Tssr125903 708 bp downstream
SNP G/T G G T G G G G T T G G G T T G G G G
rs38295205
MGI SNP Detail
Alliance Variant
Chr14:59678901 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Rr493051 within coordinates of
Tssr125903 870 bp downstream
SNP A/G A A G A A A A A A G A A A A A
rs225329780
MGI SNP Detail
Alliance Variant
Chr14:59678908 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Rr493051 within coordinates of
Tssr125903 877 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs235612774
MGI SNP Detail
Alliance Variant
Chr14:59678914 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Rr493051 within coordinates of
Tssr125903 883 bp downstream
SNP A/G G A
rs262597616
MGI SNP Detail
Alliance Variant
Chr14:59678917 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Rr493051 within coordinates of
Tssr125903 886 bp downstream
SNP G/T G T
rs219736662
MGI SNP Detail
Alliance Variant
Chr14:59678920 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Rr493051 within coordinates of
Tssr125903 889 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G G G G G G G G G T G G G G
rs237808446
MGI SNP Detail
Alliance Variant
Chr14:59678937 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Rr493051 within coordinates of
Tssr125903 906 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs37060320
MGI SNP Detail
Alliance Variant
Chr14:59678954 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Rr493051 within coordinates of
Tssr125903 923 bp downstream
SNP A/G A A A A A A G A A A G A A A
rs223317019
MGI SNP Detail
Alliance Variant
Chr14:59678982 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Rr493051 within coordinates of
Tssr125903 951 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs37534178
MGI SNP Detail
Alliance Variant
Chr14:59678995 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Rr493051 within coordinates of
Tssr125903 964 bp downstream
SNP C/T T T T T T T C T T T T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs37040032
MGI SNP Detail
Alliance Variant
Chr14:59678996 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Rr493051 within coordinates of
Tssr125903 965 bp downstream
SNP A/G A A A A A A A A A A G A A A
rs36696409
MGI SNP Detail
Alliance Variant
Chr14:59679025 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Rr493051 within coordinates of
Tssr125903 994 bp downstream
SNP G/T G G G G G G T G G G T G G G G
rs265694623
MGI SNP Detail
Alliance Variant
Chr14:59679070 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Rr493051 within coordinates of
Tssr125903 1039 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs229892947
MGI SNP Detail
Alliance Variant
Chr14:59679094 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Rr493051 within coordinates of
Tssr125903 1063 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs256296758
MGI SNP Detail
Alliance Variant
Chr14:59679111 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Rr493051 within coordinates of
Tssr125903 1080 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs262804252
MGI SNP Detail
Alliance Variant
Chr14:59679112 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Rr493051 within coordinates of
Tssr125903 1081 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs38310336
MGI SNP Detail
Alliance Variant
Chr14:59679122 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Rr493051 within coordinates of
Tssr125903 1091 bp downstream
SNP A/C A A A A A A A A A A A A A C
rs36274850
MGI SNP Detail
Alliance Variant
Chr14:59679138 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Rr493051 within coordinates of
Tssr125903 1107 bp downstream
SNP A/C C C C C C C A C C C C C C C
rs221682441
MGI SNP Detail
Alliance Variant
Chr14:59679177 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Rr493051 within coordinates of
Tssr125903 1146 bp downstream
SNP A/T T A
rs246129395
MGI SNP Detail
Alliance Variant
Chr14:59679208 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Rr493051 within coordinates of
Tssr125903 1177 bp downstream
SNP A/T A T
rs265443453
MGI SNP Detail
Alliance Variant
Chr14:59679209 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Rr493051 within coordinates of
Tssr125903 1178 bp downstream
SNP A/G A G
rs217521315
MGI SNP Detail
Alliance Variant
Chr14:59679217 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Tssr125903 1186 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs37710942
MGI SNP Detail
Alliance Variant
Chr14:59679252 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Tssr125903 1221 bp downstream
SNP A/T T T T T T T T A T
rs584102753
MGI SNP Detail
Alliance Variant
Chr14:59679266 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Tssr125903 1235 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs236537473
MGI SNP Detail
Alliance Variant
Chr14:59679391 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Tssr125903 1360 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262672035
MGI SNP Detail
Alliance Variant
Chr14:59679401 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Tssr125903 1370 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219852195
MGI SNP Detail
Alliance Variant
Chr14:59679628 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Tssr125903 1597 bp downstream
SNP A/T T T T T T T T T A T T T T T T T T T A T T A T T T T A T T T A T T A T T A T T T T T T T T A T T T T
rs230309386
MGI SNP Detail
Alliance Variant
Chr14:59679668 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Tssr125903 1637 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254092942
MGI SNP Detail
Alliance Variant
Chr14:59679678 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Tssr125903 1647 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs36936999
MGI SNP Detail
Alliance Variant
Chr14:59679694 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Tssr125903 1663 bp downstream
SNP A/C C C A C C C C C C A A C C C C
rs240343375
MGI SNP Detail
Alliance Variant
Chr14:59679742 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Tssr125903 1711 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs221994757
MGI SNP Detail
Alliance Variant
Chr14:59679888 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Tssr125903 1857 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs244063973
MGI SNP Detail
Alliance Variant
Chr14:59679893 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Tssr125903 1862 bp downstream
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs264649677
MGI SNP Detail
Alliance Variant
Chr14:59679967 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Tssr125903 1936 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs247841645
MGI SNP Detail
Alliance Variant
Chr14:59679985 Cab39l Intron
Cab39l Noncoding-Transcript-Variant
Tssr125903 1954 bp downstream
SNP A/G A G
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Showing SNP(s) 1 - 100 of 102

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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory