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Mouse SNP Summary
Symbol
Name
ID 		Tssr126390
transcription start site region 126390
MGI:6054157

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Showing SNP(s) 1 - 33 of 33

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264333445
MGI SNP Detail		 Chr14:70312689 Cpgi6680 within coordinates of
Gm63137 within coordinates of
Tssr126390 1966 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs225926068
MGI SNP Detail		 Chr14:70312690 Cpgi6680 within coordinates of
Gm63137 within coordinates of
Tssr126390 1965 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30158293
MGI SNP Detail		 Chr14:70312899 Cpgi6680 within coordinates of
Gm63137 within coordinates of
Tssr126390 1756 bp upstream
 SNP A/C C A A A
rs31032585
MGI SNP Detail		 Chr14:70312915 Cpgi6680 within coordinates of
Gm63137 within coordinates of
Tssr126390 1740 bp upstream
 SNP C/G C G G G
rs30989934
MGI SNP Detail		 Chr14:70313142 Cpgi6680 within coordinates of
Gm63137 within coordinates of
Tssr126390 1513 bp upstream
 SNP C/T T C C C
rs31309347
MGI SNP Detail		 Chr14:70313217 Cpgi6680 within coordinates of
Tssr126390 1438 bp upstream
 SNP C/T C T T T
rs263808596
MGI SNP Detail		 Chr14:70313222 Cpgi6680 within coordinates of
Tssr126390 1433 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs30727738
MGI SNP Detail		 Chr14:70313284 Cpgi6680 within coordinates of
Tssr126390 1371 bp upstream
 SNP A/G G A A A
rs248623612
MGI SNP Detail		 Chr14:70313299 Cpgi6680 within coordinates of
Tssr126390 1356 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs265872262
MGI SNP Detail		 Chr14:70313314 Cpgi6680 within coordinates of
Tssr126390 1341 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224088335
MGI SNP Detail		 Chr14:70313362 Cpgi6680 within coordinates of
Tssr126390 1293 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235646913
MGI SNP Detail		 Chr14:70313603 Cpgi6680 within coordinates of
Tssr126390 1052 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs48808821
MGI SNP Detail		 Chr14:70313711 Tssr126390 944 bp upstream
 SNP A/G A A A G G G G G G G G G G G G G G G A G G A G G G G A A G G A G A G G G G G G A G G G G G G G G A G G G
rs224896692
MGI SNP Detail		 Chr14:70313715 Tssr126390 940 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30489302
MGI SNP Detail		 Chr14:70313768 Tssr126390 887 bp upstream
 SNP A/G G A A A
rs215682516
MGI SNP Detail		 Chr14:70313780 Tssr126390 875 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs234876659
MGI SNP Detail		 Chr14:70313783 Tssr126390 872 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253800905
MGI SNP Detail		 Chr14:70313804 Tssr126390 851 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216874902
MGI SNP Detail		 Chr14:70313819 Tssr126390 836 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230873697
MGI SNP Detail		 Chr14:70313863 Tssr126390 792 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51928261
MGI SNP Detail		 Chr14:70314013 Tssr126390 642 bp upstream
 SNP C/T C C C T T T T T T T T T T T T T T T T C T T C T T T T C C T T C T C T T T T T T C T T T T T T T C C T T T
rs52410360
MGI SNP Detail		 Chr14:70314089 Cpgi6681 within coordinates of
Tssr126390 566 bp upstream
 SNP C/T T T T C C C C C C C C C C C C C C C C T C C T C C C C T T C C T C T C C C C C C T C C C C C C C C T C C C
rs231783450
MGI SNP Detail		 Chr14:70314795 Cpgi6681 within coordinates of
Egr3 within coordinates of
Tssr126390 124 bp downstream
Tssr126391 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs581837402
MGI SNP Detail		 Chr14:70314878 Cpgi6681 within coordinates of
Egr3 within coordinates of
Tssr126390 207 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T
rs263586606
MGI SNP Detail		 Chr14:70315625 Cpgi6681 within coordinates of
Egr3 within coordinates of
Tssr126390 954 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs224542898
MGI SNP Detail		 Chr14:70315689 Cpgi6681 within coordinates of
Egr3 within coordinates of
Tssr126390 1018 bp downstream
 SNP A/G A G G G G G G G G G G G G G G G G A G G A G G G G A A G G A G A G G G G G G A G G G G G G G G A G G G
rs251797689
MGI SNP Detail		 Chr14:70315700 Cpgi6681 within coordinates of
Egr3 within coordinates of
Tssr126390 1029 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs260490573
MGI SNP Detail		 Chr14:70315883 Cpgi6681 within coordinates of
Egr3 within coordinates of
Tssr126390 1212 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs218868035
MGI SNP Detail		 Chr14:70315896 Cpgi6681 within coordinates of
Egr3 within coordinates of
Tssr126390 1225 bp downstream
 SNP A/C A A A C C C C C C C C C C C C C A A C A C C A C C C C A A C A C A C C C C C C A C C C C C C C A A C C C
rs235710935
MGI SNP Detail		 Chr14:70315908 Cpgi6681 within coordinates of
Egr3 within coordinates of
Tssr126390 1237 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs256006097
MGI SNP Detail		 Chr14:70315982 Cpgi6681 within coordinates of
Egr3 within coordinates of
Tssr126390 1311 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs224965109
MGI SNP Detail		 Chr14:70316111 Cpgi6681 within coordinates of
Egr3 within coordinates of
Tssr126390 1440 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245926985
MGI SNP Detail		 Chr14:70316292 Cpgi6681 within coordinates of
Egr3 within coordinates of
Tssr126390 1621 bp downstream
 SNP C/G C C C G G G G G G G G G G G G G C C G C G G C G G G G C C G G C G C G G G G G G C G G G G G G G C C G C
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Showing SNP(s) 1 - 33 of 33
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory