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Mouse SNP Summary
Symbol
Name
ID 		Tssr126885
transcription start site region 126885
MGI:6054652

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Showing SNP(s) 1 - 57 of 57

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213162545
MGI SNP Detail		 Chr14:99537135 Cpgi6800 within coordinates of
Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 1989 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs30940261
MGI SNP Detail		 Chr14:99537150 Cpgi6800 within coordinates of
Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 1974 bp upstream
 SNP C/G C C C G G G
rs228632286
MGI SNP Detail		 Chr14:99537770 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 1354 bp upstream
 SNP T T T
rs585503634
MGI SNP Detail		 Chr14:99537819 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 1305 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs231947616
MGI SNP Detail		 Chr14:99537843 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 1281 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs48012034
MGI SNP Detail		 Chr14:99537954 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 1170 bp upstream
 SNP G/T G T T T
rs224273312
MGI SNP Detail		 Chr14:99538069 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 1055 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243098019
MGI SNP Detail		 Chr14:99538073 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 1051 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs260334044
MGI SNP Detail		 Chr14:99538204 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 920 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs221522717
MGI SNP Detail		 Chr14:99538376 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 748 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48469517
MGI SNP Detail		 Chr14:99538474 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 650 bp upstream
 SNP G/T T T G G G
rs47242878
MGI SNP Detail		 Chr14:99538515 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 609 bp upstream
 SNP C/T C C T C T
rs265432630
MGI SNP Detail		 Chr14:99538521 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 603 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C T T C C C C C C C C C C C T C C C T
rs233656693
MGI SNP Detail		 Chr14:99538523 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 601 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs258815760
MGI SNP Detail		 Chr14:99538525 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 599 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs261786349
MGI SNP Detail		 Chr14:99538527 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 597 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C T T C C C C C C C C C C T C C C T
rs245734854
MGI SNP Detail		 Chr14:99538619 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 505 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs213529790
MGI SNP Detail		 Chr14:99538623 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 501 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs579429536
MGI SNP Detail		 Chr14:99538642 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 482 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs234694410
MGI SNP Detail		 Chr14:99538717 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 407 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252158631
MGI SNP Detail		 Chr14:99538733 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 391 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs47651844
MGI SNP Detail		 Chr14:99538748 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 376 bp upstream
 SNP A/G A A G G G
rs240519478
MGI SNP Detail		 Chr14:99538766 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 358 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263773685
MGI SNP Detail		 Chr14:99538915 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 209 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs213002391
MGI SNP Detail		 Chr14:99538936 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 188 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs49832778
MGI SNP Detail		 Chr14:99539167 Klf5 within coordinates of
Rr291012 within coordinates of
Rr297571 within coordinates of
Tssr126885 28 bp downstream
 SNP A/G A G G G
rs250879179
MGI SNP Detail		 Chr14:99539169 Klf5 within coordinates of
Rr291012 within coordinates of
Rr297571 within coordinates of
Tssr126885 30 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs31353923
MGI SNP Detail		 Chr14:99539359 Klf5 within coordinates of
Rr291012 within coordinates of
Rr297571 within coordinates of
Tssr126885 220 bp downstream
 SNP C/T T T T C C C
rs249419046
MGI SNP Detail		 Chr14:99539368 Klf5 within coordinates of
Rr291012 within coordinates of
Rr297571 within coordinates of
Tssr126885 229 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs258935417
MGI SNP Detail		 Chr14:99539503 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 364 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs226839038
MGI SNP Detail		 Chr14:99539512 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 373 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs247189670
MGI SNP Detail		 Chr14:99539521 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 382 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs264771280
MGI SNP Detail		 Chr14:99539530 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 391 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30396903
MGI SNP Detail		 Chr14:99539545 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 406 bp downstream
 SNP C/T T T T C T C
rs239681413
MGI SNP Detail		 Chr14:99539617 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 478 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs257478384
MGI SNP Detail		 Chr14:99539641 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 502 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228084499
MGI SNP Detail		 Chr14:99539668 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 529 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257062860
MGI SNP Detail		 Chr14:99539756 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 617 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31075277
MGI SNP Detail		 Chr14:99539780 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 641 bp downstream
 SNP C/T C C C C T T T
rs30679125
MGI SNP Detail		 Chr14:99539785 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 646 bp downstream
 SNP C/T C C C C T T T
rs254132421
MGI SNP Detail		 Chr14:99539809 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 670 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs30625420
MGI SNP Detail		 Chr14:99539810 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 671 bp downstream
 SNP A/G A A A A G G G
rs230019458
MGI SNP Detail		 Chr14:99539984 Klf5 within coordinates of
Rr297571 within coordinates of
Tssr126885 845 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs250556655
MGI SNP Detail		 Chr14:99540123 Klf5 within coordinates of
Tssr126885 984 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213969099
MGI SNP Detail		 Chr14:99540202 Klf5 within coordinates of
Tssr126885 1063 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs239077285
MGI SNP Detail		 Chr14:99540205 Klf5 within coordinates of
Tssr126885 1066 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs263043540
MGI SNP Detail		 Chr14:99540438 Klf5 within coordinates of
Tssr126885 1299 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs585840115
MGI SNP Detail		 Chr14:99540546 Klf5 within coordinates of
Tssr126885 1407 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220427081
MGI SNP Detail		 Chr14:99540659 Klf5 within coordinates of
Tssr126885 1520 bp downstream
 SNP T T T
rs249857146
MGI SNP Detail		 Chr14:99540721 Klf5 within coordinates of
Tssr126885 1582 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs250245586
MGI SNP Detail		 Chr14:99540722 Klf5 within coordinates of
Tssr126885 1583 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs217960759
MGI SNP Detail		 Chr14:99540726 Klf5 within coordinates of
Tssr126885 1587 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30552668
MGI SNP Detail		 Chr14:99540745 Klf5 within coordinates of
Tssr126885 1606 bp downstream
 SNP G/T T T T T G G G
rs257250329
MGI SNP Detail		 Chr14:99540969 Klf5 within coordinates of
Tssr126885 1830 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs46761230
MGI SNP Detail		 Chr14:99541023 Klf5 within coordinates of
Tssr126885 1884 bp downstream
 SNP A/G A A G G G
rs245260371
MGI SNP Detail		 Chr14:99541074 Klf5 within coordinates of
Tssr126885 1935 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs266099781
MGI SNP Detail		 Chr14:99541097 Klf5 within coordinates of
Tssr126885 1958 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 57 of 57
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory