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Mouse SNP Summary
Symbol
Name
ID 		Tssr127876
transcription start site region 127876
MGI:6055643

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs49356025
MGI SNP Detail		 Chr14:30329177 Prkcd within coordinates of
Rr292184 within coordinates of
Tssr127876 1925 bp downstream
 SNP A/G A A A A A A A A A A A A A G A
rs262293423
MGI SNP Detail		 Chr14:30329202 Prkcd within coordinates of
Rr292184 within coordinates of
Tssr127876 1900 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs227577342
MGI SNP Detail		 Chr14:30329462 Prkcd within coordinates of
Rr292184 within coordinates of
Tssr127876 1640 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245231525
MGI SNP Detail		 Chr14:30329481 Prkcd within coordinates of
Rr292184 within coordinates of
Tssr127876 1621 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215304433
MGI SNP Detail		 Chr14:30329539 Prkcd within coordinates of
Rr292184 within coordinates of
Tssr127876 1563 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235267345
MGI SNP Detail		 Chr14:30329693 Prkcd within coordinates of
Rr292184 within coordinates of
Tssr127876 1409 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253947620
MGI SNP Detail		 Chr14:30329731 Prkcd within coordinates of
Rr292184 within coordinates of
Rr404042 within coordinates of
Tssr127876 1371 bp downstream
Tssr4363 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs213482880
MGI SNP Detail		 Chr14:30329736 Prkcd within coordinates of
Rr292184 within coordinates of
Rr404042 within coordinates of
Tssr127873 within coordinates of
Tssr127876 1366 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A
rs580754602
MGI SNP Detail		 Chr14:30329742 Prkcd within coordinates of
Rr292184 within coordinates of
Rr404042 within coordinates of
Tssr127873 within coordinates of
Tssr127876 1360 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs584737386
MGI SNP Detail		 Chr14:30329976 Gm62449 within coordinates of
Prkcd within coordinates of
Rr404042 within coordinates of
Tssr127876 1126 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G
rs234823650
MGI SNP Detail		 Chr14:30329983 Gm62449 within coordinates of
Prkcd within coordinates of
Rr404042 within coordinates of
Tssr127876 1119 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C
rs262619675
MGI SNP Detail		 Chr14:30330021 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 1081 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs52055865
MGI SNP Detail		 Chr14:30330177 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 925 bp downstream
 SNP A/G A A A A A A A A A A A A A G A
rs235211397
MGI SNP Detail		 Chr14:30330210 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 892 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46562784
MGI SNP Detail		 Chr14:30330285 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 817 bp downstream
 SNP C/T T T T T T T T T T T T T T C T
rs223753342
MGI SNP Detail		 Chr14:30330401 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 701 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249765103
MGI SNP Detail		 Chr14:30330586 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 516 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs47740403
MGI SNP Detail		 Chr14:30330613 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 489 bp downstream
 SNP C/T C C C C C C C C C C T C C C C
rs219847076
MGI SNP Detail		 Chr14:30330626 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 476 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs51171695
MGI SNP Detail		 Chr14:30330627 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 475 bp downstream
 SNP G/T T T T T T T T T T T T T T G T
rs265048876
MGI SNP Detail		 Chr14:30330628 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 474 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227445178
MGI SNP Detail		 Chr14:30330652 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 450 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs239050663
MGI SNP Detail		 Chr14:30330655 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 447 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259850563
MGI SNP Detail		 Chr14:30330663 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 439 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228330367
MGI SNP Detail		 Chr14:30330672 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 430 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs47702355
MGI SNP Detail		 Chr14:30330679 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 423 bp downstream
 SNP C/T C C C C C C C C C C C C C T C
rs212882210
MGI SNP Detail		 Chr14:30330693 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 409 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs228514188
MGI SNP Detail		 Chr14:30330699 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 403 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265716111
MGI SNP Detail		 Chr14:30330730 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 372 bp downstream
 SNP C C C
rs30749845
MGI SNP Detail		 Chr14:30330731 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 371 bp downstream
 SNP A/G G G A G G A A
rs235077253
MGI SNP Detail		 Chr14:30330754 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 348 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253091713
MGI SNP Detail		 Chr14:30330872 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 230 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs217796363
MGI SNP Detail		 Chr14:30330895 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 207 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs239847932
MGI SNP Detail		 Chr14:30330950 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 152 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A
rs47991943
MGI SNP Detail		 Chr14:30330997 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 105 bp downstream
 SNP C/T T T T T T T C T T T C T T C T
rs219896577
MGI SNP Detail		 Chr14:30331025 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 77 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246660305
MGI SNP Detail		 Chr14:30331039 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 63 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51183588
MGI SNP Detail		 Chr14:30331051 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 51 bp downstream
 SNP C/T C C C C C C C C C C C C C C T
rs221228510
MGI SNP Detail		 Chr14:30331173 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 39 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239118441
MGI SNP Detail		 Chr14:30331404 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 270 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs259706143
MGI SNP Detail		 Chr14:30331450 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 316 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs50831267
MGI SNP Detail		 Chr14:30331459 Gm62449 within coordinates of
Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 325 bp upstream
 SNP A/G A A A A A A A A A G A A G A
rs242141654
MGI SNP Detail		 Chr14:30331521 Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 387 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51033520
MGI SNP Detail		 Chr14:30331568 Prkcd within coordinates of
Rr292185 within coordinates of
Tssr127876 434 bp upstream
 SNP A/G A A A A A A G A A A G A A G A
rs49111656
MGI SNP Detail		 Chr14:30331642 Prkcd within coordinates of
Tssr127876 508 bp upstream
 SNP A/G G G G G G G A G G G A G G G G
rs256309919
MGI SNP Detail		 Chr14:30331730 Prkcd within coordinates of
Tssr127876 596 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs213828857
MGI SNP Detail		 Chr14:30331864 Prkcd within coordinates of
Tssr127876 730 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G T G G G G
rs228173375
MGI SNP Detail		 Chr14:30331873 Prkcd within coordinates of
Tssr127876 739 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31144041
MGI SNP Detail		 Chr14:30331881 Prkcd within coordinates of
Tssr127876 747 bp upstream
 SNP A/G A A G A A G G
rs217671944
MGI SNP Detail		 Chr14:30331934 Prkcd within coordinates of
Tssr127876 800 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs242591602
MGI SNP Detail		 Chr14:30332004 Prkcd within coordinates of
Tssr127876 870 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs256663455
MGI SNP Detail		 Chr14:30332008 Prkcd within coordinates of
Tssr127876 874 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs581479682
MGI SNP Detail		 Chr14:30332082 Prkcd within coordinates of
Tssr127876 948 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212657383
MGI SNP Detail		 Chr14:30332099 Prkcd within coordinates of
Tssr127876 965 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C T C C C C C C C C C C C C C C C C C C C
rs236670799
MGI SNP Detail		 Chr14:30332111 Prkcd within coordinates of
Tssr127876 977 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C G C C C C C G C C C C C C C C C C C C C C C C C C C
rs51307487
MGI SNP Detail		 Chr14:30332299 Prkcd within coordinates of
Tssr127876 1165 bp upstream
 SNP C/T C C C C C C C C C C C C C T C
rs221290636
MGI SNP Detail		 Chr14:30332345 Prkcd within coordinates of
Tssr127876 1211 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A
rs48223807
MGI SNP Detail		 Chr14:30332543 Prkcd within coordinates of
Tssr127876 1409 bp upstream
 SNP C/T T T T T T T T T T T T T C T
rs253103452
MGI SNP Detail		 Chr14:30332612 Prkcd within coordinates of
Tssr127876 1478 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A C A A A A A A A C A A A A
rs225621426
MGI SNP Detail		 Chr14:30332613 Prkcd within coordinates of
Tssr127876 1479 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G
rs245056514
MGI SNP Detail		 Chr14:30332630 Prkcd within coordinates of
Tssr127876 1496 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C T C C C C C C C C C C C C C C C C C C C
rs261487344
MGI SNP Detail		 Chr14:30332650 Prkcd within coordinates of
Tssr127876 1516 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C T C C C C C C C C C C C C C C T C C C C
rs223065295
MGI SNP Detail		 Chr14:30332725 Prkcd within coordinates of
Tssr127876 1591 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs239808756
MGI SNP Detail		 Chr14:30332750 Prkcd within coordinates of
Tssr127876 1616 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257589724
MGI SNP Detail		 Chr14:30332816 Prkcd within coordinates of
Tssr127876 1682 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228213259
MGI SNP Detail		 Chr14:30332818 Prkcd within coordinates of
Tssr127876 1684 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30642839
MGI SNP Detail		 Chr14:30332850 Prkcd within coordinates of
Tssr127876 1716 bp upstream
 SNP C/T C T C T T
rs584785392
MGI SNP Detail		 Chr14:30332953 Prkcd within coordinates of
Tssr127876 1819 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 68 of 68
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory