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Mouse SNP Summary
Symbol
Name
ID 		Tssr128603
transcription start site region 128603
MGI:6056370

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Showing SNP(s) 1 - 60 of 60

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213736418
MGI SNP Detail		 Chr14:54813033 Ajuba within coordinates of
Cpgi6463 within coordinates of
Rr389677 within coordinates of
Tssr128603 1951 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239897822
MGI SNP Detail		 Chr14:54813232 Ajuba within coordinates of
Cpgi6463 within coordinates of
Rr389677 within coordinates of
Tssr128603 1752 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs246374498
MGI SNP Detail		 Chr14:54813331 Ajuba within coordinates of
Cpgi6463 within coordinates of
Rr389677 within coordinates of
Tssr128603 1653 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs48757170
MGI SNP Detail		 Chr14:54813354 Ajuba within coordinates of
Cpgi6463 within coordinates of
Rr389677 within coordinates of
Tssr128603 1630 bp downstream
 SNP A/C A A C A
rs47293110
MGI SNP Detail		 Chr14:54813381 Ajuba within coordinates of
Cpgi6463 within coordinates of
Rr389677 within coordinates of
Tssr128603 1603 bp downstream
 SNP C/G/T C C C T G
rs3674253
MGI SNP Detail		 Chr14:54813810 Ajuba within coordinates of
Cpgi6463 within coordinates of
Rr389677 within coordinates of
Tssr128603 1174 bp downstream
 SNP C/G G G G C G G G
rs219262609
MGI SNP Detail		 Chr14:54813960 Ajuba within coordinates of
Cpgi6463 within coordinates of
Rr389677 within coordinates of
Tssr128603 1024 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs45661280
MGI SNP Detail		 Chr14:54813987 Ajuba within coordinates of
Cpgi6463 within coordinates of
Rr389677 within coordinates of
Tssr128603 997 bp downstream
 SNP A/G G G A
rs47226512
MGI SNP Detail		 Chr14:54814047 Ajuba within coordinates of
Cpgi6463 within coordinates of
Rr389677 within coordinates of
Tssr128603 937 bp downstream
 SNP A A A A A A
rs220999173
MGI SNP Detail		 Chr14:54814086 Ajuba within coordinates of
Cpgi6463 within coordinates of
Rr389677 within coordinates of
Tssr128603 898 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48985365
MGI SNP Detail		 Chr14:54814104 Ajuba within coordinates of
Cpgi6463 within coordinates of
Rr389677 within coordinates of
Tssr128603 880 bp downstream
 SNP T T T T T T
rs261290899
MGI SNP Detail		 Chr14:54814221 Ajuba within coordinates of
Cpgi6463 within coordinates of
Rr389677 within coordinates of
Tssr128603 763 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs51204410
MGI SNP Detail		 Chr14:54814251 Ajuba within coordinates of
Cpgi6463 within coordinates of
Rr389677 within coordinates of
Tssr128603 733 bp downstream
 SNP C/G C C G C
rs228037205
MGI SNP Detail		 Chr14:54814265 Ajuba within coordinates of
Cpgi6463 within coordinates of
Rr389677 within coordinates of
Tssr128603 719 bp downstream
 SNP A/G G A
rs241412057
MGI SNP Detail		 Chr14:54814266 Ajuba within coordinates of
Cpgi6463 within coordinates of
Rr389677 within coordinates of
Tssr128603 718 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs242856543
MGI SNP Detail		 Chr14:54814530 Ajuba within coordinates of
Cpgi6463 within coordinates of
Rr389677 within coordinates of
Tssr128603 454 bp downstream
 SNP A A A
rs47644236
MGI SNP Detail		 Chr14:54814620 Ajuba within coordinates of
Cpgi6463 within coordinates of
Rr389677 within coordinates of
Tssr128603 364 bp downstream
 SNP T T T T T
rs244331099
MGI SNP Detail		 Chr14:54814749 Ajuba within coordinates of
Cpgi6463 within coordinates of
Rr389677 within coordinates of
Tssr128603 235 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs49358918
MGI SNP Detail		 Chr14:54814866 Ajuba within coordinates of
Cpgi6463 within coordinates of
Rr389677 within coordinates of
Tssr128603 118 bp downstream
 SNP C C C C C C
rs46447717
MGI SNP Detail		 Chr14:54814951 Ajuba within coordinates of
Cpgi6463 within coordinates of
Rr389677 within coordinates of
Tssr128602 within coordinates of
Tssr128603 33 bp downstream
 SNP A/G A A G
rs50478399
MGI SNP Detail		 Chr14:54814984 Ajuba within coordinates of
Cpgi6463 within coordinates of
Rr389677 within coordinates of
Tssr128603 within coordinates of
 SNP C/T T T T C T
rs217086694
MGI SNP Detail		 Chr14:54815187 Cpgi6463 within coordinates of
Gm63340 within coordinates of
Rr389677 within coordinates of
Tssr128603 191 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs48107189
MGI SNP Detail		 Chr14:54815333 Gm63340 within coordinates of
Rr389677 within coordinates of
Tssr128603 337 bp upstream
 SNP A A A A A
rs245756890
MGI SNP Detail		 Chr14:54815334 Gm63340 within coordinates of
Rr389677 within coordinates of
Tssr128603 338 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs50712806
MGI SNP Detail		 Chr14:54815347 Gm63340 within coordinates of
Rr389677 within coordinates of
Tssr128603 351 bp upstream
 SNP C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264207872
MGI SNP Detail		 Chr14:54815388 Gm63340 within coordinates of
Rr389677 within coordinates of
Tssr128603 392 bp upstream
 SNP G/T G T
rs236781589
MGI SNP Detail		 Chr14:54815498 Gm63340 within coordinates of
Rr389677 within coordinates of
Tssr128603 502 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs46854925
MGI SNP Detail		 Chr14:54815537 Gm63340 within coordinates of
Rr389677 within coordinates of
Tssr128603 541 bp upstream
 SNP G G G G G G
rs46231662
MGI SNP Detail		 Chr14:54815663 Gm63340 within coordinates of
Rr404101 within coordinates of
Tssr128603 667 bp upstream
 SNP A/G G G A
rs48020299
MGI SNP Detail		 Chr14:54815833 Gm63340 within coordinates of
Rr404101 within coordinates of
Tssr128603 837 bp upstream
 SNP G G G G G G
rs50823898
MGI SNP Detail		 Chr14:54815936 Gm63340 within coordinates of
Tssr128603 940 bp upstream
 SNP G G G G G G
rs47172546
MGI SNP Detail		 Chr14:54815970 Gm63340 within coordinates of
Tssr128603 974 bp upstream
 SNP C C C C C
rs49584683
MGI SNP Detail		 Chr14:54815975 Gm63340 within coordinates of
Tssr128603 979 bp upstream
 SNP G G G G G G
rs49495029
MGI SNP Detail		 Chr14:54816003 Gm63340 within coordinates of
Tssr128603 1007 bp upstream
 SNP A/G A A A A G
rs51790843
MGI SNP Detail		 Chr14:54816020 Gm63340 within coordinates of
Tssr128603 1024 bp upstream
 SNP A A A A A A
rs49511623
MGI SNP Detail		 Chr14:54816041 Gm63340 within coordinates of
Tssr128603 1045 bp upstream
 SNP A/G A A A A G
rs264932004
MGI SNP Detail		 Chr14:54816149 Gm63340 within coordinates of
Tssr128603 1153 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs584378993
MGI SNP Detail		 Chr14:54816163 Gm63340 within coordinates of
Tssr128603 1167 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs266256355
MGI SNP Detail		 Chr14:54816168 Gm63340 within coordinates of
Tssr128603 1172 bp upstream
 SNP G/T G T
rs233408376
MGI SNP Detail		 Chr14:54816232 Gm63340 within coordinates of
Tssr128603 1236 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241893699
MGI SNP Detail		 Chr14:54816267 Gm63340 within coordinates of
Tssr128603 1271 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs257674807
MGI SNP Detail		 Chr14:54816278 Gm63340 within coordinates of
Tssr128603 1282 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs49676300
MGI SNP Detail		 Chr14:54816279 Gm63340 within coordinates of
Tssr128603 1283 bp upstream
 SNP T T T T T
rs245656159
MGI SNP Detail		 Chr14:54816346 Gm63340 within coordinates of
Tssr128603 1350 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs213366638
MGI SNP Detail		 Chr14:54816381 Gm63340 within coordinates of
Tssr128603 1385 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs230845604
MGI SNP Detail		 Chr14:54816415 Gm63340 within coordinates of
Tssr128603 1419 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T
rs48895412
MGI SNP Detail		 Chr14:54816441 Gm63340 within coordinates of
Tssr128603 1445 bp upstream
 SNP T T T T T
rs213094486
MGI SNP Detail		 Chr14:54816465 Gm63340 within coordinates of
Tssr128603 1469 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs46781726
MGI SNP Detail		 Chr14:54816488 Gm63340 within coordinates of
Tssr128603 1492 bp upstream
 SNP G G G G G
rs255223395
MGI SNP Detail		 Chr14:54816503 Gm63340 within coordinates of
Tssr128603 1507 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs215128611
MGI SNP Detail		 Chr14:54816512 Gm63340 within coordinates of
Tssr128603 1516 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs51092985
MGI SNP Detail		 Chr14:54816615 Gm63340 within coordinates of
Tssr128603 1619 bp upstream
 SNP G G G G
rs262037245
MGI SNP Detail		 Chr14:54816662 Gm63340 within coordinates of
Tssr128603 1666 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223572010
MGI SNP Detail		 Chr14:54816832 Gm63340 within coordinates of
Tssr128603 1836 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244227438
MGI SNP Detail		 Chr14:54816834 Gm63340 within coordinates of
Tssr128603 1838 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs49880884
MGI SNP Detail		 Chr14:54816847 Gm63340 within coordinates of
Tssr128603 1851 bp upstream
 SNP G G G G
rs50100479
MGI SNP Detail		 Chr14:54816850 Gm63340 within coordinates of
Tssr128603 1854 bp upstream
 SNP A A A A A
rs241791766
MGI SNP Detail		 Chr14:54816891 Gm63340 within coordinates of
Tssr128603 1895 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs257554299
MGI SNP Detail		 Chr14:54816899 Gm63340 within coordinates of
Tssr128603 1903 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221657375
MGI SNP Detail		 Chr14:54816973 Gm63340 within coordinates of
Tssr128603 1977 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
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Showing SNP(s) 1 - 60 of 60
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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