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Mouse SNP Summary
Symbol
Name
ID 		Tssr130332
transcription start site region 130332
MGI:6058099

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Showing SNP(s) 1 - 53 of 53

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs223411253
MGI SNP Detail		 Chr14:122697277 Tssr130332 1747 bp downstream
Zic5 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243489546
MGI SNP Detail		 Chr14:122697291 Tssr130332 1733 bp downstream
Zic5 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C A C C C C A C C C C
rs586064664
MGI SNP Detail		 Chr14:122697391 Tssr130332 1633 bp downstream
Zic5 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263541773
MGI SNP Detail		 Chr14:122697402 Tssr130332 1622 bp downstream
Zic5 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G A G G G G G G G G G
rs221085501
MGI SNP Detail		 Chr14:122697499 Tssr130332 1525 bp downstream
Zic5 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs579526269
MGI SNP Detail		 Chr14:122697644 Tssr130332 1380 bp downstream
Zic5 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241946770
MGI SNP Detail		 Chr14:122697674 Tssr130332 1350 bp downstream
Zic5 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G A G G G G A G G G G
rs259515089
MGI SNP Detail		 Chr14:122697699 Tssr130332 1325 bp downstream
Zic5 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C A C C C C A C C C C
rs228018781
MGI SNP Detail		 Chr14:122697713 Tssr130332 1311 bp downstream
Zic5 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T C T T T T T T T T T
rs244722474
MGI SNP Detail		 Chr14:122697718 Tssr130332 1306 bp downstream
Zic5 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs261336346
MGI SNP Detail		 Chr14:122697725 Tssr130332 1299 bp downstream
Zic5 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C T C C C C T C C C C
rs230975078
MGI SNP Detail		 Chr14:122697791 Tssr130332 1233 bp downstream
Zic5 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250582409
MGI SNP Detail		 Chr14:122697864 Tssr130332 1160 bp downstream
Zic5 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G A G G G G A G G G G
rs215829898
MGI SNP Detail		 Chr14:122697887 Tssr130332 1137 bp downstream
Zic5 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C G C C C C C C C C C
rs30604608
MGI SNP Detail		 Chr14:122697928 Tssr130332 1096 bp downstream
Zic5 within coordinates of
 SNP C/T C C T T T T C
rs248807754
MGI SNP Detail		 Chr14:122697998 Tssr130332 1026 bp downstream
Zic5 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs216727072
MGI SNP Detail		 Chr14:122698057 Tssr130332 967 bp downstream
Zic5 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C T C C C C C C C C C
rs235522210
MGI SNP Detail		 Chr14:122698151 Tssr130332 873 bp downstream
Zic5 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs261000532
MGI SNP Detail		 Chr14:122698184 Tssr130332 840 bp downstream
Zic5 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G A G G G G G G G G G
rs214949324
MGI SNP Detail		 Chr14:122698250 Tssr130332 774 bp downstream
Zic5 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238360021
MGI SNP Detail		 Chr14:122698309 Tssr130332 715 bp downstream
Zic5 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T A T T T T T T T T
rs252180113
MGI SNP Detail		 Chr14:122698555 Tssr130332 469 bp downstream
Zic5 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs221033329
MGI SNP Detail		 Chr14:122698589 Tssr130332 435 bp downstream
Zic5 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241884449
MGI SNP Detail		 Chr14:122698648 Tssr130332 376 bp downstream
Zic5 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs252897349
MGI SNP Detail		 Chr14:122698716 Tssr130332 308 bp downstream
Zic5 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs221727606
MGI SNP Detail		 Chr14:122698790 Tssr130332 234 bp downstream
Zic5 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241795305
MGI SNP Detail		 Chr14:122698837 Tssr130332 187 bp downstream
Zic5 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264516600
MGI SNP Detail		 Chr14:122698838 Tssr130332 186 bp downstream
Zic5 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs230687967
MGI SNP Detail		 Chr14:122698920 Tssr130332 104 bp downstream
Zic5 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245742630
MGI SNP Detail		 Chr14:122699016 Tssr130332 8 bp downstream
Zic5 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs259768496
MGI SNP Detail		 Chr14:122699137 Tssr130332 103 bp upstream
Zic5 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227245511
MGI SNP Detail		 Chr14:122699150 Tssr130332 116 bp upstream
Zic5 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs248742796
MGI SNP Detail		 Chr14:122699216 Tssr130332 182 bp upstream
Zic5 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T C T T T T C T T T T
rs260623503
MGI SNP Detail		 Chr14:122699593 Tssr130332 559 bp upstream
Zic5 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C T C C C C T C C C C
rs229265720
MGI SNP Detail		 Chr14:122699630 Tssr130332 596 bp upstream
Zic5 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs249177844
MGI SNP Detail		 Chr14:122699647 Tssr130332 613 bp upstream
Zic5 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs215281662
MGI SNP Detail		 Chr14:122699662 Tssr130332 628 bp upstream
Zic5 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C G C C C C G C C C C
rs236355849
MGI SNP Detail		 Chr14:122699860 Tssr130332 826 bp upstream
Zic5 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C T C C C C T C C C C
rs246161288
MGI SNP Detail		 Chr14:122699894 Tssr130332 860 bp upstream
Zic5 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A G A A A A G A A A A
rs215422172
MGI SNP Detail		 Chr14:122699974 Tssr130332 940 bp upstream
Zic5 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs583041286
MGI SNP Detail		 Chr14:122699996 Tssr130332 962 bp upstream
Zic5 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs587025943
MGI SNP Detail		 Chr14:122700000 Tssr130332 966 bp upstream
Zic5 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T
rs235440928
MGI SNP Detail		 Chr14:122700035 Tssr130332 1001 bp upstream
Zic5 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252854985
MGI SNP Detail		 Chr14:122700170 Tssr130332 1136 bp upstream
Zic5 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G A G G G G G G A G G A G G G G G G G G G
rs30621083
MGI SNP Detail		 Chr14:122700241 Cpgi6894 within coordinates of
Tssr130332 1207 bp upstream
Zic5 within coordinates of
 SNP A/G A G G G A
rs236769441
MGI SNP Detail		 Chr14:122700405 Cpgi6894 within coordinates of
Tssr130332 1371 bp upstream
Zic5 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255165051
MGI SNP Detail		 Chr14:122700435 Cpgi6894 within coordinates of
Tssr130332 1401 bp upstream
Zic5 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222779476
MGI SNP Detail		 Chr14:122700533 Cpgi6894 within coordinates of
Tssr130332 1499 bp upstream
Zic5 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238596444
MGI SNP Detail		 Chr14:122700658 Cpgi6894 within coordinates of
Tssr130332 1624 bp upstream
Zic5 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238277682
MGI SNP Detail		 Chr14:122700736 Cpgi6894 within coordinates of
Tssr130332 1702 bp upstream
Zic5 within coordinates of
 SNP C/T C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs220870012
MGI SNP Detail		 Chr14:122700794 Cpgi6894 within coordinates of
Tssr130332 1760 bp upstream
Zic5 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs242647751
MGI SNP Detail		 Chr14:122700944 Cpgi6894 within coordinates of
Tssr130332 1910 bp upstream
Zic5 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C T C C C C C C C C C
rs260572389
MGI SNP Detail		 Chr14:122700985 Cpgi6894 within coordinates of
Gm56762 within coordinates of
Tssr130332 1951 bp upstream
Zic5 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
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Showing SNP(s) 1 - 53 of 53
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory