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Mouse SNP Summary
Symbol
Name
ID 		Tssr133527
transcription start site region 133527
MGI:6061294

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Showing SNP(s) 1 - 74 of 74

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs48405953
MGI SNP Detail		 Chr15:103199856 Copz1 within coordinates of
Rr312659 within coordinates of
Tssr133527 1975 bp upstream
 SNP C/G G C C G C C C C G C C G C
rs46323222
MGI SNP Detail		 Chr15:103199914 Copz1 within coordinates of
Rr312659 within coordinates of
Tssr133527 1917 bp upstream
 SNP C/G C C C C C C C C C C C C G C
rs234179555
MGI SNP Detail		 Chr15:103199949 Copz1 within coordinates of
Rr312659 within coordinates of
Tssr133527 1882 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs31998878
MGI SNP Detail		 Chr15:103199986 Copz1 within coordinates of
Rr312659 within coordinates of
Tssr133527 1845 bp upstream
 SNP C/T T T C T T T C T C C C T C C C T T C C
rs46967289
MGI SNP Detail		 Chr15:103200031 Copz1 within coordinates of
Rr312659 within coordinates of
Tssr133527 1800 bp upstream
 SNP A/G G G G G G G A G G G A G G G G
rs262156576
MGI SNP Detail		 Chr15:103200107 Copz1 within coordinates of
Rr312659 within coordinates of
Tssr133527 1724 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T A T T T T T T T T T T T T
rs228698068
MGI SNP Detail		 Chr15:103200111 Copz1 within coordinates of
Rr312659 within coordinates of
Tssr133527 1720 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs245817853
MGI SNP Detail		 Chr15:103200177 Copz1 within coordinates of
Rr312659 within coordinates of
Tssr133527 1654 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs213752863
MGI SNP Detail		 Chr15:103200191 Copz1 within coordinates of
Rr312659 within coordinates of
Tssr133527 1640 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs228128272
MGI SNP Detail		 Chr15:103200338 Copz1 within coordinates of
Tssr133527 1493 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs587049524
MGI SNP Detail		 Chr15:103200397 Copz1 within coordinates of
Tssr133527 1434 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs581489264
MGI SNP Detail		 Chr15:103200399 Copz1 within coordinates of
Tssr133527 1432 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs584915980
MGI SNP Detail		 Chr15:103200412 Copz1 within coordinates of
Tssr133527 1419 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs578715521
MGI SNP Detail		 Chr15:103200424 Copz1 within coordinates of
Tssr133527 1407 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T T T T T T T T A T T T T T T T T T T T T
rs246712830
MGI SNP Detail		 Chr15:103200437 Copz1 within coordinates of
Tssr133527 1394 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs582107886
MGI SNP Detail		 Chr15:103200539 Copz1 within coordinates of
Tssr133527 1292 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs584100666
MGI SNP Detail		 Chr15:103200540 Copz1 within coordinates of
Tssr133527 1291 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs578309823
MGI SNP Detail		 Chr15:103200575 Copz1 within coordinates of
Tssr133527 1256 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs581734441
MGI SNP Detail		 Chr15:103200576 Copz1 within coordinates of
Tssr133527 1255 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs586414025
MGI SNP Detail		 Chr15:103200577 Copz1 within coordinates of
Tssr133527 1254 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs33885841
MGI SNP Detail		 Chr15:103200681 Copz1 within coordinates of
Tssr133527 1150 bp upstream
 SNP C/T T C T C
rs108685544
MGI SNP Detail		 Chr15:103200712 Copz1 within coordinates of
Tssr133527 1119 bp upstream
 SNP C/T C T T T
rs108737120
MGI SNP Detail		 Chr15:103200713 Copz1 within coordinates of
Tssr133527 1118 bp upstream
 SNP A/G A G G G
rs212037154
MGI SNP Detail		 Chr15:103200730 Copz1 within coordinates of
Tssr133527 1101 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232084266
MGI SNP Detail		 Chr15:103200731 Copz1 within coordinates of
Tssr133527 1100 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs249645029
MGI SNP Detail		 Chr15:103200735 Copz1 within coordinates of
Tssr133527 1096 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs221206441
MGI SNP Detail		 Chr15:103200827 Copz1 within coordinates of
Rr312660 within coordinates of
Tssr133527 1004 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A
rs238863574
MGI SNP Detail		 Chr15:103200967 Copz1 within coordinates of
Rr312660 within coordinates of
Tssr133527 864 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260715554
MGI SNP Detail		 Chr15:103200981 Copz1 within coordinates of
Rr312660 within coordinates of
Tssr133527 850 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs32018905
MGI SNP Detail		 Chr15:103201098 Copz1 within coordinates of
Rr312660 within coordinates of
Tssr133527 733 bp upstream
 SNP A/G G G A G G G A G A A A G A A A G A A A
rs247832200
MGI SNP Detail		 Chr15:103201250 Copz1 within coordinates of
Rr312660 within coordinates of
Tssr133527 581 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs264926206
MGI SNP Detail		 Chr15:103201450 Copz1 within coordinates of
Rr312660 within coordinates of
Tssr133527 381 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31825765
MGI SNP Detail		 Chr15:103201482 Copz1 within coordinates of
Rr312660 within coordinates of
Tssr133527 349 bp upstream
 SNP C/T C C T C C C T T T T C T T T C C T T
rs47731270
MGI SNP Detail		 Chr15:103201531 Copz1 within coordinates of
Rr312660 within coordinates of
Tssr133527 300 bp upstream
 SNP T T T T
rs48767407
MGI SNP Detail		 Chr15:103201532 Copz1 within coordinates of
Rr312660 within coordinates of
Tssr133527 299 bp upstream
 SNP G G G G
rs48087590
MGI SNP Detail		 Chr15:103201650 Copz1 within coordinates of
Rr312660 within coordinates of
Tssr133527 181 bp upstream
 SNP C C C C
rs246504721
MGI SNP Detail		 Chr15:103201865 Copz1 within coordinates of
Rr301903 within coordinates of
Tssr133527 32 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219478223
MGI SNP Detail		 Chr15:103201877 Copz1 within coordinates of
Rr301903 within coordinates of
Tssr133527 44 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32473880
MGI SNP Detail		 Chr15:103201947 Copz1 within coordinates of
Rr301903 within coordinates of
Rr309022 within coordinates of
Tssr133527 114 bp downstream
 SNP C/T T C C C C
rs249787553
MGI SNP Detail		 Chr15:103201999 Copz1 within coordinates of
Rr301903 within coordinates of
Rr309022 within coordinates of
Tssr133527 166 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs212111107
MGI SNP Detail		 Chr15:103202042 Copz1 within coordinates of
Rr301903 within coordinates of
Rr309022 within coordinates of
Tssr133527 209 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C G C C C C C C C C C C C C C C G C C C C
rs232006680
MGI SNP Detail		 Chr15:103202088 Copz1 within coordinates of
Rr301903 within coordinates of
Tssr133527 255 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249714975
MGI SNP Detail		 Chr15:103202112 Copz1 within coordinates of
Rr301903 within coordinates of
Tssr133527 279 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G
rs31555671
MGI SNP Detail		 Chr15:103202120 Copz1 within coordinates of
Rr301903 within coordinates of
Tssr133527 287 bp downstream
 SNP A/G A G A G G G
rs232572926
MGI SNP Detail		 Chr15:103202318 Copz1 within coordinates of
Tssr133527 485 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs32192326
MGI SNP Detail		 Chr15:103202380 Copz1 within coordinates of
Tssr133527 547 bp downstream
 SNP C/T T C T C C C
rs225558572
MGI SNP Detail		 Chr15:103202398 Copz1 within coordinates of
Tssr133527 565 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50211206
MGI SNP Detail		 Chr15:103202498 Copz1 within coordinates of
Tssr133527 665 bp downstream
 SNP A/G A A A A A A A A A A A A A G A
rs51335628
MGI SNP Detail		 Chr15:103202562 Copz1 within coordinates of
Tssr133527 729 bp downstream
 SNP T T T
rs218437056
MGI SNP Detail		 Chr15:103202588 Copz1 within coordinates of
Tssr133527 755 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs239991101
MGI SNP Detail		 Chr15:103202615 Copz1 within coordinates of
Rr301904 within coordinates of
Tssr133527 782 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257919854
MGI SNP Detail		 Chr15:103202633 Copz1 within coordinates of
Rr301904 within coordinates of
Tssr133527 800 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs31746906
MGI SNP Detail		 Chr15:103202713 Copz1 within coordinates of
Rr301904 within coordinates of
Tssr133527 880 bp downstream
 SNP A/T T A A
rs32530135
MGI SNP Detail		 Chr15:103202717 Copz1 within coordinates of
Rr301904 within coordinates of
Tssr133527 884 bp downstream
 SNP A/T T A A
rs31996663
MGI SNP Detail		 Chr15:103202722 Copz1 within coordinates of
Rr301904 within coordinates of
Tssr133527 889 bp downstream
 SNP A/T A T T
rs31934534
MGI SNP Detail		 Chr15:103202736 Copz1 within coordinates of
Rr301904 within coordinates of
Tssr133527 903 bp downstream
 SNP C/G/T G ? ?
rs32046780
MGI SNP Detail		 Chr15:103202742 Copz1 within coordinates of
Rr301904 within coordinates of
Tssr133527 909 bp downstream
 SNP G/T G T T
rs31772872
MGI SNP Detail		 Chr15:103203005 Copz1 within coordinates of
Tssr133527 1172 bp downstream
 SNP C/T C C T C C C T C C T T C T C T C C T T
rs32427755
MGI SNP Detail		 Chr15:103203241 Copz1 within coordinates of
Tssr133527 1408 bp downstream
 SNP A/G A A G A A A G G G A G G G A G G G
rs261620369
MGI SNP Detail		 Chr15:103203245 Copz1 within coordinates of
Tssr133527 1412 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs31640618
MGI SNP Detail		 Chr15:103203251 Copz1 within coordinates of
Tssr133527 1418 bp downstream
 SNP C/T C C T C C C T T T C T C T
rs47844620
MGI SNP Detail		 Chr15:103203367 Copz1 within coordinates of
Tssr133527 1534 bp downstream
 SNP C/G G G G G G G G C C G C G C G G C G
rs51741077
MGI SNP Detail		 Chr15:103203446 Copz1 within coordinates of
Tssr133527 1613 bp downstream
 SNP C/T T C T T T C C C C T C C C T C C C
rs46410526
MGI SNP Detail		 Chr15:103203452 Copz1 within coordinates of
Tssr133527 1619 bp downstream
 SNP T T T
rs52078640
MGI SNP Detail		 Chr15:103203483 Copz1 within coordinates of
Tssr133527 1650 bp downstream
 SNP A/G G A G G G A A A A G A A A G G A A
rs52543599
MGI SNP Detail		 Chr15:103203497 Copz1 within coordinates of
Tssr133527 1664 bp downstream
 SNP C/T C C C C C C T C C C T C C C C
rs582596018
MGI SNP Detail		 Chr15:103203548 Copz1 within coordinates of
Tssr133527 1715 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs247551904
MGI SNP Detail		 Chr15:103203566 Copz1 within coordinates of
Tssr133527 1733 bp downstream
 SNP G G G
rs52568702
MGI SNP Detail		 Chr15:103203644 Copz1 within coordinates of
Tssr133527 1811 bp downstream
 SNP A/T A T
rs52275428
MGI SNP Detail		 Chr15:103203645 Copz1 within coordinates of
Tssr133527 1812 bp downstream
 SNP A/T A T
rs31976010
MGI SNP Detail		 Chr15:103203655 Copz1 within coordinates of
Tssr133527 1822 bp downstream
 SNP A/G A G A A A A A G G A G G A G G G
rs585944902
MGI SNP Detail		 Chr15:103203662 Copz1 within coordinates of
Tssr133527 1829 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs52472581
MGI SNP Detail		 Chr15:103203672 Copz1 within coordinates of
Tssr133527 1839 bp downstream
 SNP C/T C C C C C C C C C C C C T C
rs33858876
MGI SNP Detail		 Chr15:103203786 Copz1 within coordinates of
Tssr133527 1953 bp downstream
 SNP A/G G A G G G A G A A G A G A G G A A
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Showing SNP(s) 1 - 74 of 74
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory